Personal tools

MCL coexpression mm9:2049: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{MCL_coexpression_mm9
{{MCL_coexpression_mm9|coexpression_dpi_cluster_scores_mean=-0.249472791536412,0.0581543679721373,0.0913211115635419,0.384523212885986,0.392744047887317,0.169570586051686,0.161189279994189,-0.762157594222483,-0.634166719029006,-0.662714299000509,-0.727838730978146,-0.753824562880837,-0.762157594222483,-0.753058224954978,-0.24805924733584,-0.362265970450609,-0.704573348941758,-0.324884258006584,-0.328229511105792,-0.378077769649677,0.036488336331695,-0.351684032207463,-0.711765649489578,0.471899598078253,0.485907312317981,0.146789563084103,0.0285314593791947,0.0960568862867605,0.71123484437381,0.564889932427185,0.439132297044252,0.0901210455595524,0.112924271332897,-0.0768946498703413,0.320211634080311,0.401566873658748,0.449118026914294,-0.724197838163547,-0.762157594222483,-0.762157594222483,-0.762157594222483,-0.762157594222483,-0.719188673498125,0.509498312817651,0.461367479231796,0.25851407761377,0.371803977735141,-0.217549939915561,-0.239539340489461,-0.211031294988543,0.194471911376926,0.0444261108822548,-0.121658336747126,-0.702937528099085,-0.686451452862748,-0.162496627377501,0.0188411530031174,-0.196495189677999,-0.380903354240518,-0.477401260626022,-0.375939608844846,0.576918667796558,0.574914528757128,0.763778144487256,0.815287842260446,0.788813347378461,0.444816725014838,0.164171477284907,-0.262674680039956,-0.262509971039091,-0.305899172249318,-0.488617553238145,-0.448211010145536,-0.252722173974611,-0.184610102677126,-0.301674675774008,-0.68154287458869,-0.723016066140397,-0.62906190967156,-0.389962230636708,-0.39517283709591,-0.414684218967176,-0.687257058586503,-0.654788652724335,-0.650541805460429,-0.460242998877597,-0.457654232945957,-0.449566146875301,0.133417531660169,0.231722582736293,0.0521712950893103,0.884819247355781,1.41140540197744,1.09495633543892,1.16127381785302,0.860114972191599,0.583474912871744,0.646752689669308,0.638527130996586,0.628912719534509,-0.550887246153769,0.596903661373348,0.685543847349909,0.54218323256498,1.1787001435775,1.1753780697735,1.17616036903292,0.598204105769437,-0.276521218916456,-0.447362709629122,0.00954890053036285,0.00391905844759447,-0.0284255285206293,-0.0730749617959224,-0.0985507486742005,-0.339475728866431,-0.253463117219428,-0.408381366640097,-0.154329673516919,0.172545753255647,-0.090822685544078,0.0921585710715111,0.376294923414588,-0.593622345419473,-0.514803217074361,0.295961416328019,-0.266606905069427,-0.458585613453715,-0.345732160908481,-0.718552040437189,-0.721255408458931,-0.570558852204914,-0.727356042564066,-0.762157594222483,-0.741659912628599,-0.670127803950585,-0.0316221285357746,0.16865376188834,0.465334499038975,0.153184182204807,0.230908366159729,0.156032881286529,0.188044701902588,0.0281600572475359,-0.120775002847758,-0.211065877924694,-0.107031428467813,0.0526023821368979,0.651706837545428,0.468763750732925,0.553624209630308,0.595987568144375,0.638147298466844,0.632950951244222,0.625293491129298,0.00811250112680094,-0.551397748056292,-0.647131015778789,-0.590152846701409,-0.0959391534426925,-0.0967403422607415,-0.155786191364943,-0.13125029766536,-0.262831627936562,-0.164094565601592,-0.271675313818196,-0.215254478648916,-0.407261954125883,-0.227356939576956,-0.367085853619701,-0.393409059303176,-0.366184703500291,-0.45727120358589,-0.49000533901845,-0.762157594222483,-0.496170689574503,0.0456099373128579,0.0473829434791899,0.0139738760928405,0.0947336020148975,0.218205612843642,0.106528411911619,0.0942860904308363,0.0994416299729746,0.226230760813716,0.0895175669193447,0.0914551853611793,0.109125259474895,0.094801909255687,0.229564064178922,0.184312699088243,0.201015129928133,0.114289625643462,-0.0391682442325841,0.107328726523609,-0.190127757355725,-0.235107181366158,-0.252378243946659,-0.321544279123322,-0.351546977606384,-0.406630364205412,-0.327971515378397,0.852477673746137,-0.121174603018463,-0.102532340131561,-0.149859866842098,-0.0500705131872994,-0.0326525957561001,0.0102618779081844,0.167566793678186,0.471526958629129,0.625317436883517,0.709354249528816,0.815589633758628,0.908929458562097,0.806251935600209,0.929312125168024,1.16440149379847,0.510742884543803,0.142143444441575,0.175923918510883,0.124927315981798,0.318830497106842,0.539171491150993,0.70290985938142,0.817399331196451,0.421012333598474,0.466528882562558,0.365975372650581,0.415155803055518,0.447583866343387,0.485478365092544,0.471217421158486,0.691935003590072,-0.127282651312793,-0.214843383193442,-0.689237038066804,-0.685513571256505,0.172079796848435,-0.296779565035536,-0.0177391505075986,-0.279684710724202,-0.258212359330697,0.038642146933909,0.144598956312229,0.10814303451274,-0.053560072151058,0.0526242432745158,-0.0854506543761528,-0.59811788530346,0.311088892688918,0.161845196255653,0.0678013154358828,0.189224872785374,-0.470433446053689,0.19102075306535,0.160515275898928,-0.12344896392226,-0.0255625545825178,-0.113593113361341,0.0480783532974198,0.0229573550978392,0.0405905579915794,-0.276488022877471,-0.174504097622336,-0.48673813447852,-0.454814619353717,-0.0195347818868468,-0.0750330169203765,-0.0238157226717581,-0.0934864024357678,0.205153916392335,0.0282732737148614,-0.0300584184892392,0.525307863553721,0.277436073490829,-0.135237325413161,0.929469284777185,0.481325869926215,0.575937275620512,0.814400240494048,0.960411671145289,0.24208123508772,-0.725220497877161,-0.289906066853113,-0.110891381529894,-0.506002135115152,-0.644096220181144,-0.630132609114522,-0.664515323479115,-0.237991825142007,-0.0932842382711765,-0.139735027820881,0.504846501032956,0.195094181052876,0.29079599941893,0.409915629471733,0.516931946590644,0.558014416416931,0.52481985574821,0.604811155167802,0.580614551884246,0.404446032037104,-0.420061660401792,-0.713619725476248,0.149593531361514,0.234133599401871,0.0912929620677299,0.0956361529887752,-0.0428852599913577,-0.177622726797189,-0.226827355572138,-0.411391123959003,-0.59440591166921,-0.554605344566528,-0.355946948473193,0.047046737982821,-0.106311408096398,-0.335159367680622,-0.358333278133193,-0.447700545616186,-0.531737005303502,-0.578479636993924,-0.557816536996726,-0.623440606725414,-0.593945235106042,-0.473770100078226,-0.556826071019841,-0.501396406318961,0.597249797219525,0.411180216609453,0.60475633163122,0.801738688787188,0.792249860209921,0.0194488934627344,0.406885572038705,1.16128234113016,-0.236110963400077,-0.762157594222483,-0.762157594222483,-0.679260738008442,-0.730081500653271,-0.705502300857807,-0.762157594222483,-0.762157594222483,-0.721791545156928,-0.721580549834941,-0.716856796178239,-0.133759681215485,0.237076891371201,0.215992184483301,0.316347117753966,-0.164758352037014,-0.102145003219852,0.059592402993271,0.0357799081625309,0.0385708849944364,0.0388709106683862,0.0494368582730114,0.0822466985393792,0.111793404727,0.094014096183048,0.0653098590576024,-0.0191624252502465,0.0693607836630903,0.137430797324764,0.0520336455035545,0.149948330643691,0.0986493169713206,0.0463225809350312,0.0346169960612784,0.0474968012137101,0.0749041462286439,0.0501926156033912,0.0938081066927347,0.0454769010292861,0.0755931925532502,-0.0645201381972743,0.0684535084461126,0.0497854660435885,0.207935354260204,0.0474605399358133,0.256001050588768,0.304270655553021,0.255434407633931,0.347870754428659,0.236218142331899,0.329896491586898,0.0880090155381045|coexpression_dpi_cluster_scores_median=-0.248122186896808,0.0617162502485096,0.177790635231042,0.433539443676573,0.445798197342604,0.194766117936571,0.199383433348773,-0.741152266284198,-0.632542797252982,-0.703281958533575,-0.73765111343344,-0.73765111343344,-0.741152266284198,-0.741152266284198,-0.288239835890882,-0.295069755874325,-0.73765111343344,-0.333263317608284,-0.333945943880328,-0.335538433376996,0.0272946723098865,-0.337236371015831,-0.695507163291812,0.469146047848224,0.481593530222453,0.198848100919405,0.0176371860646504,0.0535860972874034,0.673444659994183,0.532718145528501,0.42566330207159,0.181365613662787,0.0955002066346309,-0.0822308197872775,0.316294661642003,0.408732392371282,0.477034870644635,-0.695507163291812,-0.741152266284198,-0.741152266284198,-0.741152266284198,-0.741152266284198,-0.700726233562811,0.479771421601781,0.43655633492313,0.260083303147008,0.408700416696819,-0.301530316719485,-0.179956428697622,-0.236345651580159,0.164710008063896,0.175727079971629,-0.0957900534308069,-0.695507163291812,-0.695507163291812,-0.126446818272337,-0.0376861380637021,-0.146380112848278,-0.409531541124035,-0.420046197772463,-0.402344592624985,0.591126378702878,0.597010847271521,0.818575474135438,0.886037511506951,0.89390583670799,0.436353835706496,0.190452713461625,-0.280336337605984,-0.331430165591262,-0.313102798056027,-0.528936625387008,-0.451767775281843,-0.262174119630151,-0.177586885196932,-0.227154062217643,-0.73765111343344,-0.715057914229474,-0.666625745530148,-0.392507084608327,-0.406814349671975,-0.429265796803375,-0.690329343129546,-0.73765111343344,-0.648712486326743,-0.463103205586979,-0.490336535056379,-0.473675772954913,0.118610038822689,0.222674386648929,0.139382537044752,0.823576089132128,1.29573371333972,1.09622341726389,1.17061044660072,0.853824162574079,0.570562236050532,0.64109342687926,0.618160131478124,0.635237549160816,-0.584049670066146,0.643727075588221,0.765639004479437,0.635038749585826,1.18960703215854,1.18195469507346,1.20936242549875,0.532156542409572,-0.284603127763323,-0.455899562888825,0.0133073600166834,-0.0274682445614965,-0.026188589943223,-0.0934100063452618,-0.107386283674913,-0.317671953469524,-0.223148484320481,-0.410460510337427,-0.137052150743331,0.184894460996628,-0.0867930887170695,0.0916005503406626,0.354210152334845,-0.549685136230317,-0.533029812756303,0.264954327725983,-0.26252590031448,-0.491413583558968,-0.292830981402795,-0.710842881945962,-0.695507163291812,-0.581380427883446,-0.73765111343344,-0.741152266284198,-0.741152266284198,-0.66790078460724,-0.0613251100202378,0.169911712095225,0.497180829793881,0.154454319392438,0.23679271441099,0.147611148133608,0.184549621594567,0.00291699346519345,-0.11643741337843,-0.221296849652201,-0.116572834413371,0.107645256736751,0.638904001363933,0.445345429125787,0.549289370597537,0.596902239917519,0.613006736248118,0.621226801654213,0.637769044051012,0.0184782251281576,-0.522795308190859,-0.647488400798346,-0.58912379606556,-0.138098341544245,-0.0948349170227927,-0.116880244991966,-0.0941124019933425,-0.282191100096183,-0.120617125367581,-0.267464830212193,-0.218090463531855,-0.426414174998463,-0.246776370724706,-0.362025099007149,-0.370151284064042,-0.405711035866546,-0.466896767074564,-0.493769969773584,-0.741152266284198,-0.473288558412348,0.0345254365923302,0.0501615594879983,0.0345763350176269,0.0967578734114485,0.211580501794908,0.112846668334409,0.0529794905011746,0.0941831426987759,0.27793005842716,0.104169613098428,0.0902691853074526,0.162985126492414,0.112921743789526,0.169530200837949,0.140011629371865,0.176349977380089,0.136788411597442,-0.0285134947044888,0.0617859229272033,-0.178746970239428,-0.24205214472549,-0.243985508444651,-0.310961953462162,-0.335723127502832,-0.407259644699919,-0.367616679639735,0.812790162848987,-0.136829433963767,-0.105299917878745,-0.179275603874869,-0.0455118087273284,-0.0518068290457806,-0.0281762440433676,0.156641098774581,0.404601615293818,0.637991581110865,0.708416144472754,0.811054598552891,0.942829906140922,0.841950208359382,0.880589834274304,1.10520683338777,0.537055198089305,0.124110204609868,0.168438167468902,0.101684465182163,0.356819831265879,0.529435066378043,0.699476522025003,0.828643789450032,0.414670465880509,0.466634741893995,0.412695164925657,0.409951159752635,0.437705909936198,0.469008889396465,0.508234345158119,0.691668033023023,-0.11901514415257,-0.273267775533799,-0.695507163291812,-0.6996746793638,0.232983713404213,-0.332320929736719,-0.0438067975704107,-0.221471325745168,-0.257764592805055,0.0549187112729485,0.108640550534871,0.103403928154587,-0.0436822932131663,0.0391137903148674,-0.0446051813415191,-0.620143824914712,0.249419273611746,0.147390802855436,0.0849885631481155,0.18874822636868,-0.599722613132528,0.157072003384923,0.158144188421183,-0.089079737817141,-0.0388755767899342,-0.120629398231453,0.0287782098045942,0.0531397765824976,0.0438061755126684,-0.242681255286966,-0.12179194154156,-0.521022105263782,-0.475566603752757,-0.0172719945610798,-0.0936892892227371,-0.0328441615576774,-0.0539441217301508,0.208971325045835,0.029429804725421,-0.0293994726608619,0.496828232854753,0.295487916251876,-0.0643251520592417,0.901821042484098,0.505204476190976,0.534179032417866,0.768790026590417,0.967309568215567,0.256816441376222,-0.73765111343344,-0.357385973241235,-0.134485629833897,-0.506713514285176,-0.640379322521132,-0.659471895252154,-0.669691057059629,-0.20391711907152,-0.101389183058398,-0.142285384358929,0.581981808638298,0.159290771544248,0.282759201153073,0.430574463250396,0.522257694891375,0.592551942785046,0.530515787728569,0.644129850765203,0.586006395812418,0.333324371982749,-0.415186684627914,-0.73765111343344,0.164091170962075,0.222301776791099,0.0686663240595094,0.101966235789641,-0.0924389022320429,-0.150602157556768,-0.246673451720497,-0.418856699525211,-0.601531013728329,-0.561766687607965,-0.365449789360402,0.034644850640342,-0.0936906018487803,-0.310056575036347,-0.329113018815798,-0.449560080134923,-0.537022481870411,-0.576308668615118,-0.547901433153545,-0.657305292296688,-0.564844554491656,-0.474976904437485,-0.555155903105482,-0.505961356038277,0.597987425324873,0.47731829802612,0.658693748242976,0.825772484499111,0.802500004925368,0.0324409831382596,0.446525681493992,1.18814491425415,-0.229615786277767,-0.741152266284198,-0.741152266284198,-0.695507163291812,-0.73765111343344,-0.73765111343344,-0.741152266284198,-0.741152266284198,-0.705931976880417,-0.741152266284198,-0.696062478923039,-0.122475539554061,0.196616667902604,0.212223888027747,0.348729145789464,-0.159765228111647,-0.0839638300279775,0.0504024658226025,0.0409645681178705,0.0458886636107019,0.0620389563223789,0.0432026328055496,0.132663682160057,0.109506886191762,0.0831702039051902,0.0625793760421521,-0.00282316256727195,0.0846182979746472,0.124735132405519,0.058427094256689,0.156076805745301,0.0974817378982694,0.0542048623127616,0.0134873068401233,0.0438126797531252,0.0720546941663825,0.0614770628425213,0.0841768022988669,0.0482226373349704,0.0425486950026064,-0.0553385279933057,0.0705313458240061,0.0392229505249874,0.218626793694718,0.0604906570981157,0.247475346213894,0.354154227497244,0.244894449516912,0.328026897361915,0.255392493127872,0.385525992878063,0.0820327523292392|gostat_on_MCL_coexpression=|ontology_enrichment_celltype=CL:0000223!1.18e-08!20;CL:0000066!7.09e-07!25|ontology_enrichment_disease=|ontology_enrichment_uberon=UBERON:0004119!2.35e-10!118;UBERON:0000925!2.35e-10!118;UBERON:0006595!2.35e-10!118;UBERON:0001007!8.44e-10!116;UBERON:0001555!8.44e-10!116;UBERON:0007026!8.44e-10!116;UBERON:0004921!3.39e-09!114;UBERON:0005178!5.53e-07!17;UBERON:0005181!5.53e-07!17;UBERON:0002224!5.53e-07!17;UBERON:0000915!5.53e-07!17;UBERON:0008947!5.53e-07!17;UBERON:0003258!5.53e-07!17|tfbs_overrepresentation_for_novel_motifs=0.641384,0.801438,0.612053,0.688265,0.483253,0.704257,0.803568,0.370124,0.381467,0.489964,0.755749,0.790506,0.37041,1.91144,0.502646,0,1.02248,0.473993,0.352304,0.683591,0.570433,0.57409,0.815872,0.481455,1.50428,0.846564,0.906602,0.727368,0.535752,3.98803,1.6946,1.12823,0.471365,1.54138,0.503207,0.30022,0.460474,0.786577,0.434783,0.40068,0.478558,0.717547,0.185353,0.504971,1.63233,0.675898,0.938241,0.744678,0.49007,2.2898,2.29438,0.875451,0.282443,1.2746,1.29252,0.82458,0.549352,0.776619,0.882473,0.822375,1.10737,0.885556,1.80941,0.992216,0.8366,1.03484,1.43193,1.78579,1.1025,1.63712,0.590754,0.377213,0.205546,1.32691,0.323563,0.310084,0.854076,0.926147,1.08947,0.575233,0.37865,1.04072,0.884013,0.362446,2.70843,0.377699,0.40635,0.290918,0.943446,1.94914,1.50286,1.21342,4.17859,0.490141,0.430015,0.409166,0.367176,1.14445,0.938512,0.264911,0.460566,1.12793,2.80621,1.00472,1.00361,0.717061,1.06633,1.75347,0.580757,0.57247,0.633483,1.25851,0.576517,0.7614,1.51002,0.476467,1.40021,0.692434,1.02384,0.456123,1.33244,2.22508,0.848526,0.925183,1.56496,1.09333,0.812403,1.13449,1.43038,0.493609,1.23918,1.62879,1.40022,0.839311,1.53196,0.195549,0.650785,0.719099,1.482,2.31884,1.91709,1.43673,0.861473,1.1391,0.996781,0.718046,0.941555,2.27909,0.653418,0.485304,0.293812,0.184289,1.27621,0.416214,0.838313,1.35996,0.87653,0.516549,0.63863,0.650472,1.49167,1.20739,1.09379,0.630949,0.993294,0.830321,0.459159,0.788782,0.280875|tfbs_overrepresentation_jaspar=MA0003.1;0.331308,MA0004.1;0.6888,MA0006.1;0.497533,MA0007.1;0.672186,MA0009.1;1.15569,MA0014.1;1.46333,MA0017.1;0.528196,MA0019.1;2.21448,MA0024.1;1.11019,MA0025.1;1.39562,MA0027.1;2.81824,MA0028.1;0.509589,MA0029.1;1.08753,MA0030.1;1.09438,MA0031.1;1.05719,MA0038.1;0.846479,MA0040.1;1.16866,MA0041.1;0.604221,MA0042.1;0.589368,MA0043.1;1.25564,MA0046.1;1.1929,MA0048.1;0.735223,MA0050.1;0.731539,MA0051.1;0.856094,MA0052.1;1.17701,MA0055.1;0.396346,MA0056.1;0,MA0057.1;0.701847,MA0058.1;0.581673,MA0059.1;0.59559,MA0060.1;0.403071,MA0061.1;1.95592,MA0063.1;0,MA0066.1;3.23171,MA0067.1;1.50873,MA0068.1;0.713436,MA0069.1;1.17737,MA0070.1;1.16732,MA0071.1;0.73062,MA0072.1;1.15853,MA0073.1;0.0471131,MA0074.1;0.795862,MA0076.1;0.550092,MA0077.1;1.13603,MA0078.1;0.891476,MA0081.1;1.5065,MA0083.1;1.25482,MA0084.1;1.84013,MA0087.1;1.21037,MA0088.1;2.45101,MA0089.1;0,MA0090.1;2.65101,MA0091.1;0.703314,MA0092.1;0.651119,MA0093.1;0.519148,MA0095.1;0,MA0098.1;0,MA0100.1;0.783305,MA0101.1;0.605676,MA0103.1;0.540576,MA0105.1;0.313353,MA0106.1;0.899777,MA0107.1;0.533522,MA0108.2;0.989014,MA0109.1;0,MA0111.1;0.666525,MA0113.1;0.869608,MA0114.1;0.43587,MA0115.1;1.25852,MA0116.1;9.46016,MA0117.1;1.22527,MA0119.1;0.606338,MA0122.1;1.24573,MA0124.1;1.45461,MA0125.1;1.37907,MA0130.1;0,MA0131.1;0.960068,MA0132.1;0,MA0133.1;0,MA0135.1;1.29308,MA0136.1;0.817395,MA0139.1;0.365453,MA0140.1;0.78318,MA0141.1;0.563066,MA0142.1;1.04199,MA0143.1;0.887119,MA0144.1;0.439506,MA0145.1;0.608454,MA0146.1;0.647546,MA0147.1;0.453952,MA0148.1;0.706718,MA0149.1;0.611881,MA0062.2;0.319836,MA0035.2;0.788288,MA0039.2;6.89554,MA0138.2;0.951653,MA0002.2;0.368961,MA0137.2;0.559766,MA0104.2;0.386166,MA0047.2;0.845655,MA0112.2;0.608441,MA0065.2;1.14711,MA0150.1;0.67206,MA0151.1;0,MA0152.1;0.84577,MA0153.1;1.31015,MA0154.1;7.90751,MA0155.1;2.6534,MA0156.1;0.549102,MA0157.1;1.0083,MA0158.1;0,MA0159.1;0.465802,MA0160.1;0.71003,MA0161.1;0,MA0162.1;1.16288,MA0163.1;5.18171,MA0164.1;0.817786,MA0080.2;0.534538,MA0018.2;0.828253,MA0099.2;0.944966,MA0079.2;4.73893,MA0102.2;1.8929,MA0258.1;0.419871,MA0259.1;0.441366,MA0442.1;0}}
|coexpression_dpi_cluster_scores_mean=-0.249472791536412,0.0581543679721373,0.0913211115635419,0.384523212885986,0.392744047887317,0.169570586051686,0.161189279994189,-0.762157594222483,-0.634166719029006,-0.662714299000509,-0.727838730978146,-0.753824562880837,-0.762157594222483,-0.753058224954978,-0.24805924733584,-0.362265970450609,-0.704573348941758,-0.324884258006584,-0.328229511105792,-0.378077769649677,0.036488336331695,-0.351684032207463,-0.711765649489578,0.471899598078253,0.485907312317981,0.146789563084103,0.0285314593791947,0.0960568862867605,0.71123484437381,0.564889932427185,0.439132297044252,0.0901210455595524,0.112924271332897,-0.0768946498703413,0.320211634080311,0.401566873658748,0.449118026914294,-0.724197838163547,-0.762157594222483,-0.762157594222483,-0.762157594222483,-0.762157594222483,-0.719188673498125,0.509498312817651,0.461367479231796,0.25851407761377,0.371803977735141,-0.217549939915561,-0.239539340489461,-0.211031294988543,0.194471911376926,0.0444261108822548,-0.121658336747126,-0.702937528099085,-0.686451452862748,-0.162496627377501,0.0188411530031174,-0.196495189677999,-0.380903354240518,-0.477401260626022,-0.375939608844846,0.576918667796558,0.574914528757128,0.763778144487256,0.815287842260446,0.788813347378461,0.444816725014838,0.164171477284907,-0.262674680039956,-0.262509971039091,-0.305899172249318,-0.488617553238145,-0.448211010145536,-0.252722173974611,-0.184610102677126,-0.301674675774008,-0.68154287458869,-0.723016066140397,-0.62906190967156,-0.389962230636708,-0.39517283709591,-0.414684218967176,-0.687257058586503,-0.654788652724335,-0.650541805460429,-0.460242998877597,-0.457654232945957,-0.449566146875301,0.133417531660169,0.231722582736293,0.0521712950893103,0.884819247355781,1.41140540197744,1.09495633543892,1.16127381785302,0.860114972191599,0.583474912871744,0.646752689669308,0.638527130996586,0.628912719534509,-0.550887246153769,0.596903661373348,0.685543847349909,0.54218323256498,1.1787001435775,1.1753780697735,1.17616036903292,0.598204105769437,-0.276521218916456,-0.447362709629122,0.00954890053036285,0.00391905844759447,-0.0284255285206293,-0.0730749617959224,-0.0985507486742005,-0.339475728866431,-0.253463117219428,-0.408381366640097,-0.154329673516919,0.172545753255647,-0.090822685544078,0.0921585710715111,0.376294923414588,-0.593622345419473,-0.514803217074361,0.295961416328019,-0.266606905069427,-0.458585613453715,-0.345732160908481,-0.718552040437189,-0.721255408458931,-0.570558852204914,-0.727356042564066,-0.762157594222483,-0.741659912628599,-0.670127803950585,-0.0316221285357746,0.16865376188834,0.465334499038975,0.153184182204807,0.230908366159729,0.156032881286529,0.188044701902588,0.0281600572475359,-0.120775002847758,-0.211065877924694,-0.107031428467813,0.0526023821368979,0.651706837545428,0.468763750732925,0.553624209630308,0.595987568144375,0.638147298466844,0.632950951244222,0.625293491129298,0.00811250112680094,-0.551397748056292,-0.647131015778789,-0.590152846701409,-0.0959391534426925,-0.0967403422607415,-0.155786191364943,-0.13125029766536,-0.262831627936562,-0.164094565601592,-0.271675313818196,-0.215254478648916,-0.407261954125883,-0.227356939576956,-0.367085853619701,-0.393409059303176,-0.366184703500291,-0.45727120358589,-0.49000533901845,-0.762157594222483,-0.496170689574503,0.0456099373128579,0.0473829434791899,0.0139738760928405,0.0947336020148975,0.218205612843642,0.106528411911619,0.0942860904308363,0.0994416299729746,0.226230760813716,0.0895175669193447,0.0914551853611793,0.109125259474895,0.094801909255687,0.229564064178922,0.184312699088243,0.201015129928133,0.114289625643462,-0.0391682442325841,0.107328726523609,-0.190127757355725,-0.235107181366158,-0.252378243946659,-0.321544279123322,-0.351546977606384,-0.406630364205412,-0.327971515378397,0.852477673746137,-0.121174603018463,-0.102532340131561,-0.149859866842098,-0.0500705131872994,-0.0326525957561001,0.0102618779081844,0.167566793678186,0.471526958629129,0.625317436883517,0.709354249528816,0.815589633758628,0.908929458562097,0.806251935600209,0.929312125168024,1.16440149379847,0.510742884543803,0.142143444441575,0.175923918510883,0.124927315981798,0.318830497106842,0.539171491150993,0.70290985938142,0.817399331196451,0.421012333598474,0.466528882562558,0.365975372650581,0.415155803055518,0.447583866343387,0.485478365092544,0.471217421158486,0.691935003590072,-0.127282651312793,-0.214843383193442,-0.689237038066804,-0.685513571256505,0.172079796848435,-0.296779565035536,-0.0177391505075986,-0.279684710724202,-0.258212359330697,0.038642146933909,0.144598956312229,0.10814303451274,-0.053560072151058,0.0526242432745158,-0.0854506543761528,-0.59811788530346,0.311088892688918,0.161845196255653,0.0678013154358828,0.189224872785374,-0.470433446053689,0.19102075306535,0.160515275898928,-0.12344896392226,-0.0255625545825178,-0.113593113361341,0.0480783532974198,0.0229573550978392,0.0405905579915794,-0.276488022877471,-0.174504097622336,-0.48673813447852,-0.454814619353717,-0.0195347818868468,-0.0750330169203765,-0.0238157226717581,-0.0934864024357678,0.205153916392335,0.0282732737148614,-0.0300584184892392,0.525307863553721,0.277436073490829,-0.135237325413161,0.929469284777185,0.481325869926215,0.575937275620512,0.814400240494048,0.960411671145289,0.24208123508772,-0.725220497877161,-0.289906066853113,-0.110891381529894,-0.506002135115152,-0.644096220181144,-0.630132609114522,-0.664515323479115,-0.237991825142007,-0.0932842382711765,-0.139735027820881,0.504846501032956,0.195094181052876,0.29079599941893,0.409915629471733,0.516931946590644,0.558014416416931,0.52481985574821,0.604811155167802,0.580614551884246,0.404446032037104,-0.420061660401792,-0.713619725476248,0.149593531361514,0.234133599401871,0.0912929620677299,0.0956361529887752,-0.0428852599913577,-0.177622726797189,-0.226827355572138,-0.411391123959003,-0.59440591166921,-0.554605344566528,-0.355946948473193,0.047046737982821,-0.106311408096398,-0.335159367680622,-0.358333278133193,-0.447700545616186,-0.531737005303502,-0.578479636993924,-0.557816536996726,-0.623440606725414,-0.593945235106042,-0.473770100078226,-0.556826071019841,-0.501396406318961,0.597249797219525,0.411180216609453,0.60475633163122,0.801738688787188,0.792249860209921,0.0194488934627344,0.406885572038705,1.16128234113016,-0.236110963400077,-0.762157594222483,-0.762157594222483,-0.679260738008442,-0.730081500653271,-0.705502300857807,-0.762157594222483,-0.762157594222483,-0.721791545156928,-0.721580549834941,-0.716856796178239,-0.133759681215485,0.237076891371201,0.215992184483301,0.316347117753966,-0.164758352037014,-0.102145003219852,0.059592402993271,0.0357799081625309,0.0385708849944364,0.0388709106683862,0.0494368582730114,0.0822466985393792,0.111793404727,0.094014096183048,0.0653098590576024,-0.0191624252502465,0.0693607836630903,0.137430797324764,0.0520336455035545,0.149948330643691,0.0986493169713206,0.0463225809350312,0.0346169960612784,0.0474968012137101,0.0749041462286439,0.0501926156033912,0.0938081066927347,0.0454769010292861,0.0755931925532502,-0.0645201381972743,0.0684535084461126,0.0497854660435885,0.207935354260204,0.0474605399358133,0.256001050588768,0.304270655553021,0.255434407633931,0.347870754428659,0.236218142331899,0.329896491586898,0.0880090155381045
|coexpression_dpi_cluster_scores_median=-0.248122186896808,0.0617162502485096,0.177790635231042,0.433539443676573,0.445798197342604,0.194766117936571,0.199383433348773,-0.741152266284198,-0.632542797252982,-0.703281958533575,-0.73765111343344,-0.73765111343344,-0.741152266284198,-0.741152266284198,-0.288239835890882,-0.295069755874325,-0.73765111343344,-0.333263317608284,-0.333945943880328,-0.335538433376996,0.0272946723098865,-0.337236371015831,-0.695507163291812,0.469146047848224,0.481593530222453,0.198848100919405,0.0176371860646504,0.0535860972874034,0.673444659994183,0.532718145528501,0.42566330207159,0.181365613662787,0.0955002066346309,-0.0822308197872775,0.316294661642003,0.408732392371282,0.477034870644635,-0.695507163291812,-0.741152266284198,-0.741152266284198,-0.741152266284198,-0.741152266284198,-0.700726233562811,0.479771421601781,0.43655633492313,0.260083303147008,0.408700416696819,-0.301530316719485,-0.179956428697622,-0.236345651580159,0.164710008063896,0.175727079971629,-0.0957900534308069,-0.695507163291812,-0.695507163291812,-0.126446818272337,-0.0376861380637021,-0.146380112848278,-0.409531541124035,-0.420046197772463,-0.402344592624985,0.591126378702878,0.597010847271521,0.818575474135438,0.886037511506951,0.89390583670799,0.436353835706496,0.190452713461625,-0.280336337605984,-0.331430165591262,-0.313102798056027,-0.528936625387008,-0.451767775281843,-0.262174119630151,-0.177586885196932,-0.227154062217643,-0.73765111343344,-0.715057914229474,-0.666625745530148,-0.392507084608327,-0.406814349671975,-0.429265796803375,-0.690329343129546,-0.73765111343344,-0.648712486326743,-0.463103205586979,-0.490336535056379,-0.473675772954913,0.118610038822689,0.222674386648929,0.139382537044752,0.823576089132128,1.29573371333972,1.09622341726389,1.17061044660072,0.853824162574079,0.570562236050532,0.64109342687926,0.618160131478124,0.635237549160816,-0.584049670066146,0.643727075588221,0.765639004479437,0.635038749585826,1.18960703215854,1.18195469507346,1.20936242549875,0.532156542409572,-0.284603127763323,-0.455899562888825,0.0133073600166834,-0.0274682445614965,-0.026188589943223,-0.0934100063452618,-0.107386283674913,-0.317671953469524,-0.223148484320481,-0.410460510337427,-0.137052150743331,0.184894460996628,-0.0867930887170695,0.0916005503406626,0.354210152334845,-0.549685136230317,-0.533029812756303,0.264954327725983,-0.26252590031448,-0.491413583558968,-0.292830981402795,-0.710842881945962,-0.695507163291812,-0.581380427883446,-0.73765111343344,-0.741152266284198,-0.741152266284198,-0.66790078460724,-0.0613251100202378,0.169911712095225,0.497180829793881,0.154454319392438,0.23679271441099,0.147611148133608,0.184549621594567,0.00291699346519345,-0.11643741337843,-0.221296849652201,-0.116572834413371,0.107645256736751,0.638904001363933,0.445345429125787,0.549289370597537,0.596902239917519,0.613006736248118,0.621226801654213,0.637769044051012,0.0184782251281576,-0.522795308190859,-0.647488400798346,-0.58912379606556,-0.138098341544245,-0.0948349170227927,-0.116880244991966,-0.0941124019933425,-0.282191100096183,-0.120617125367581,-0.267464830212193,-0.218090463531855,-0.426414174998463,-0.246776370724706,-0.362025099007149,-0.370151284064042,-0.405711035866546,-0.466896767074564,-0.493769969773584,-0.741152266284198,-0.473288558412348,0.0345254365923302,0.0501615594879983,0.0345763350176269,0.0967578734114485,0.211580501794908,0.112846668334409,0.0529794905011746,0.0941831426987759,0.27793005842716,0.104169613098428,0.0902691853074526,0.162985126492414,0.112921743789526,0.169530200837949,0.140011629371865,0.176349977380089,0.136788411597442,-0.0285134947044888,0.0617859229272033,-0.178746970239428,-0.24205214472549,-0.243985508444651,-0.310961953462162,-0.335723127502832,-0.407259644699919,-0.367616679639735,0.812790162848987,-0.136829433963767,-0.105299917878745,-0.179275603874869,-0.0455118087273284,-0.0518068290457806,-0.0281762440433676,0.156641098774581,0.404601615293818,0.637991581110865,0.708416144472754,0.811054598552891,0.942829906140922,0.841950208359382,0.880589834274304,1.10520683338777,0.537055198089305,0.124110204609868,0.168438167468902,0.101684465182163,0.356819831265879,0.529435066378043,0.699476522025003,0.828643789450032,0.414670465880509,0.466634741893995,0.412695164925657,0.409951159752635,0.437705909936198,0.469008889396465,0.508234345158119,0.691668033023023,-0.11901514415257,-0.273267775533799,-0.695507163291812,-0.6996746793638,0.232983713404213,-0.332320929736719,-0.0438067975704107,-0.221471325745168,-0.257764592805055,0.0549187112729485,0.108640550534871,0.103403928154587,-0.0436822932131663,0.0391137903148674,-0.0446051813415191,-0.620143824914712,0.249419273611746,0.147390802855436,0.0849885631481155,0.18874822636868,-0.599722613132528,0.157072003384923,0.158144188421183,-0.089079737817141,-0.0388755767899342,-0.120629398231453,0.0287782098045942,0.0531397765824976,0.0438061755126684,-0.242681255286966,-0.12179194154156,-0.521022105263782,-0.475566603752757,-0.0172719945610798,-0.0936892892227371,-0.0328441615576774,-0.0539441217301508,0.208971325045835,0.029429804725421,-0.0293994726608619,0.496828232854753,0.295487916251876,-0.0643251520592417,0.901821042484098,0.505204476190976,0.534179032417866,0.768790026590417,0.967309568215567,0.256816441376222,-0.73765111343344,-0.357385973241235,-0.134485629833897,-0.506713514285176,-0.640379322521132,-0.659471895252154,-0.669691057059629,-0.20391711907152,-0.101389183058398,-0.142285384358929,0.581981808638298,0.159290771544248,0.282759201153073,0.430574463250396,0.522257694891375,0.592551942785046,0.530515787728569,0.644129850765203,0.586006395812418,0.333324371982749,-0.415186684627914,-0.73765111343344,0.164091170962075,0.222301776791099,0.0686663240595094,0.101966235789641,-0.0924389022320429,-0.150602157556768,-0.246673451720497,-0.418856699525211,-0.601531013728329,-0.561766687607965,-0.365449789360402,0.034644850640342,-0.0936906018487803,-0.310056575036347,-0.329113018815798,-0.449560080134923,-0.537022481870411,-0.576308668615118,-0.547901433153545,-0.657305292296688,-0.564844554491656,-0.474976904437485,-0.555155903105482,-0.505961356038277,0.597987425324873,0.47731829802612,0.658693748242976,0.825772484499111,0.802500004925368,0.0324409831382596,0.446525681493992,1.18814491425415,-0.229615786277767,-0.741152266284198,-0.741152266284198,-0.695507163291812,-0.73765111343344,-0.73765111343344,-0.741152266284198,-0.741152266284198,-0.705931976880417,-0.741152266284198,-0.696062478923039,-0.122475539554061,0.196616667902604,0.212223888027747,0.348729145789464,-0.159765228111647,-0.0839638300279775,0.0504024658226025,0.0409645681178705,0.0458886636107019,0.0620389563223789,0.0432026328055496,0.132663682160057,0.109506886191762,0.0831702039051902,0.0625793760421521,-0.00282316256727195,0.0846182979746472,0.124735132405519,0.058427094256689,0.156076805745301,0.0974817378982694,0.0542048623127616,0.0134873068401233,0.0438126797531252,0.0720546941663825,0.0614770628425213,0.0841768022988669,0.0482226373349704,0.0425486950026064,-0.0553385279933057,0.0705313458240061,0.0392229505249874,0.218626793694718,0.0604906570981157,0.247475346213894,0.354154227497244,0.244894449516912,0.328026897361915,0.255392493127872,0.385525992878063,0.0820327523292392
|gostat_on_MCL_coexpression=
|ontology_enrichment_celltype=CL:0000223!1.18e-08!20;CL:0000066!7.09e-07!25
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0004119!2.35e-10!118;UBERON:0000925!2.35e-10!118;UBERON:0006595!2.35e-10!118;UBERON:0001007!8.44e-10!116;UBERON:0001555!8.44e-10!116;UBERON:0007026!8.44e-10!116;UBERON:0004921!3.39e-09!114;UBERON:0005178!5.53e-07!17;UBERON:0005181!5.53e-07!17;UBERON:0002224!5.53e-07!17;UBERON:0000915!5.53e-07!17;UBERON:0008947!5.53e-07!17;UBERON:0003258!5.53e-07!17
|tfbs_overrepresentation_for_novel_motifs=0.641384,0.801438,0.612053,0.688265,0.483253,0.704257,0.803568,0.370124,0.381467,0.489964,0.755749,0.790506,0.37041,1.91144,0.502646,0,1.02248,0.473993,0.352304,0.683591,0.570433,0.57409,0.815872,0.481455,1.50428,0.846564,0.906602,0.727368,0.535752,3.98803,1.6946,1.12823,0.471365,1.54138,0.503207,0.30022,0.460474,0.786577,0.434783,0.40068,0.478558,0.717547,0.185353,0.504971,1.63233,0.675898,0.938241,0.744678,0.49007,2.2898,2.29438,0.875451,0.282443,1.2746,1.29252,0.82458,0.549352,0.776619,0.882473,0.822375,1.10737,0.885556,1.80941,0.992216,0.8366,1.03484,1.43193,1.78579,1.1025,1.63712,0.590754,0.377213,0.205546,1.32691,0.323563,0.310084,0.854076,0.926147,1.08947,0.575233,0.37865,1.04072,0.884013,0.362446,2.70843,0.377699,0.40635,0.290918,0.943446,1.94914,1.50286,1.21342,4.17859,0.490141,0.430015,0.409166,0.367176,1.14445,0.938512,0.264911,0.460566,1.12793,2.80621,1.00472,1.00361,0.717061,1.06633,1.75347,0.580757,0.57247,0.633483,1.25851,0.576517,0.7614,1.51002,0.476467,1.40021,0.692434,1.02384,0.456123,1.33244,2.22508,0.848526,0.925183,1.56496,1.09333,0.812403,1.13449,1.43038,0.493609,1.23918,1.62879,1.40022,0.839311,1.53196,0.195549,0.650785,0.719099,1.482,2.31884,1.91709,1.43673,0.861473,1.1391,0.996781,0.718046,0.941555,2.27909,0.653418,0.485304,0.293812,0.184289,1.27621,0.416214,0.838313,1.35996,0.87653,0.516549,0.63863,0.650472,1.49167,1.20739,1.09379,0.630949,0.993294,0.830321,0.459159,0.788782,0.280875
}}

Latest revision as of 17:55, 17 September 2013


Phase1 CAGE Peaks

 Short description
Mm9::chr12:8778151..8778167,+p2@Sdc1
Mm9::chr12:8778184..8778200,+p4@Sdc1
Mm9::chr12:8778211..8778231,+p1@Sdc1
Mm9::chr12:8778254..8778270,+p3@Sdc1


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

no results for this coexpression

Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>

Cell Type
Ontology termp-valuen
endodermal cell1.18e-0820
epithelial cell7.09e-0725

Uber Anatomy
Ontology termp-valuen
endoderm-derived structure2.35e-10118
endoderm2.35e-10118
presumptive endoderm2.35e-10118
digestive system8.44e-10116
digestive tract8.44e-10116
primitive gut8.44e-10116
subdivision of digestive tract3.39e-09114
thoracic cavity element5.53e-0717
thoracic segment organ5.53e-0717
thoracic cavity5.53e-0717
thoracic segment of trunk5.53e-0717
respiratory primordium5.53e-0717
endoderm of foregut5.53e-0717


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)
MA0003.10.331308
MA0004.10.6888
MA0006.10.497533
MA0007.10.672186
MA0009.11.15569
MA0014.11.46333
MA0017.10.528196
MA0019.12.21448
MA0024.11.11019
MA0025.11.39562
MA0027.12.81824
MA0028.10.509589
MA0029.11.08753
MA0030.11.09438
MA0031.11.05719
MA0038.10.846479
MA0040.11.16866
MA0041.10.604221
MA0042.10.589368
MA0043.11.25564
MA0046.11.1929
MA0048.10.735223
MA0050.10.731539
MA0051.10.856094
MA0052.11.17701
MA0055.10.396346
MA0056.10
MA0057.10.701847
MA0058.10.581673
MA0059.10.59559
MA0060.10.403071
MA0061.11.95592
MA0063.10
MA0066.13.23171
MA0067.11.50873
MA0068.10.713436
MA0069.11.17737
MA0070.11.16732
MA0071.10.73062
MA0072.11.15853
MA0073.10.0471131
MA0074.10.795862
MA0076.10.550092
MA0077.11.13603
MA0078.10.891476
MA0081.11.5065
MA0083.11.25482
MA0084.11.84013
MA0087.11.21037
MA0088.12.45101
MA0089.10
MA0090.12.65101
MA0091.10.703314
MA0092.10.651119
MA0093.10.519148
MA0095.10
MA0098.10
MA0100.10.783305
MA0101.10.605676
MA0103.10.540576
MA0105.10.313353
MA0106.10.899777
MA0107.10.533522
MA0108.20.989014
MA0109.10
MA0111.10.666525
MA0113.10.869608
MA0114.10.43587
MA0115.11.25852
MA0116.19.46016
MA0117.11.22527
MA0119.10.606338
MA0122.11.24573
MA0124.11.45461
MA0125.11.37907
MA0130.10
MA0131.10.960068
MA0132.10
MA0133.10
MA0135.11.29308
MA0136.10.817395
MA0139.10.365453
MA0140.10.78318
MA0141.10.563066
MA0142.11.04199
MA0143.10.887119
MA0144.10.439506
MA0145.10.608454
MA0146.10.647546
MA0147.10.453952
MA0148.10.706718
MA0149.10.611881
MA0062.20.319836
MA0035.20.788288
MA0039.26.89554
MA0138.20.951653
MA0002.20.368961
MA0137.20.559766
MA0104.20.386166
MA0047.20.845655
MA0112.20.608441
MA0065.21.14711
MA0150.10.67206
MA0151.10
MA0152.10.84577
MA0153.11.31015
MA0154.17.90751
MA0155.12.6534
MA0156.10.549102
MA0157.11.0083
MA0158.10
MA0159.10.465802
MA0160.10.71003
MA0161.10
MA0162.11.16288
MA0163.15.18171
MA0164.10.817786
MA0080.20.534538
MA0018.20.828253
MA0099.20.944966
MA0079.24.73893
MA0102.21.8929
MA0258.10.419871
MA0259.10.441366
MA0442.10
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MCL_coexpression_mm9:2049&oldid=3074048"