FFCP PHASE1:Hg19::chr1:3607307..3607317,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7161 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12003 | |||
|TSSclassifier=strong | |||
|UniProt=O15350 | |||
|association_with_transcript=71bp_to_ENST00000378280,ENST00000378285,ENST00000378288,NM_001126240,NM_001126241,NM_001126242,NM_001204189,NM_001204190,NM_001204191,uc001akr.2,uc001aks.2,uc009vlk.1,uc010nzj.1_5end | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_15_at_TP73_5end | |||
|id=chr1:3607307..3607317,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;3.61e-34;2!CL:0000242;3.61e-34;2!CL:0002623;3.66e-23;3!CL:0000312;1.40e-14;5!CL:0000622;1.71e-14;5!CL:0000240;2.19e-12;6!CL:0000311;2.19e-12;6!CL:0000079;2.19e-12;6!CL:0000237;2.19e-12;6!CL:0000154;2.59e-12;6!CL:0000362;1.04e-08;9!CL:0000150;1.16e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.61e-34,2;CL:0002623,4.09e-23,3;CL:0000312,1.40e-14,5;CL:0000622,1.83e-14,5;CL:0000240,2.19e-12,6;CL:0000311,2.19e-12,6;CL:0000079,2.19e-12,6;CL:0000237,2.19e-12,6;CL:0000036,2.19e-12,6;CL:0000357,2.19e-12,6;CL:0000114,2.19e-12,6;CL:0000154,2.74e-12,6;CL:0000362,1.04e-08,9;CL:0000150,1.21e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000357;2.19e-12;6!CL:0000114;2.19e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!7.71e-22!3;UBERON:0005290!7.71e-22!3;UBERON:0010096!7.71e-22!3;UBERON:0000341!2.41e-15!2;UBERON:0001897!2.41e-15!2;UBERON:0002298!2.51e-14!8;UBERON:0007023!8.47e-13!115;UBERON:0000974!1.78e-11!10;UBERON:0000153!8.05e-11!129;UBERON:0007811!8.05e-11!129;UBERON:0004733!1.31e-09!12;UBERON:0002028!1.31e-09!12;UBERON:0007277!1.31e-09!12;UBERON:0002171!6.03e-09!1;UBERON:0006518!6.03e-09!1;UBERON:0008949!6.03e-09!1;UBERON:0000101!6.03e-09!1;UBERON:0002167!6.03e-09!1;UBERON:0004732!7.01e-09!13;UBERON:0001301!8.78e-09!1;UBERON:0002336!1.10e-08!1;UBERON:0001018!1.10e-08!1;UBERON:0002473!1.10e-08!1;UBERON:0005340!1.10e-08!1;UBERON:0002316!1.10e-08!1;UBERON:0003544!1.10e-08!1;UBERON:0001020!1.10e-08!1;UBERON:0005970!1.10e-08!1;UBERON:0002437!1.10e-08!1;UBERON:0000955!2.32e-08!69;UBERON:0006238!2.32e-08!69;UBERON:0001017!2.52e-08!82;UBERON:0005743!7.34e-08!86;UBERON:0003076!1.03e-07!15;UBERON:0003057!1.03e-07!15;UBERON:0000924!2.43e-07!173;UBERON:0006601!2.43e-07!173;UBERON:0000033!3.07e-07!123;UBERON:0003408!5.38e-07!10;UBERON:0000073!5.85e-07!94;UBERON:0001016!5.85e-07!94;UBERON:0001049!9.89e-07!57;UBERON:0005068!9.89e-07!57;UBERON:0006241!9.89e-07!57;UBERON:0007135!9.89e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;3.34e-66;1!UBERON:0006518;3.34e-66;1!UBERON:0008949;3.34e-66;1!UBERON:0000101;3.34e-66;1!UBERON:0002167;3.34e-66;1!UBERON:0001044;2.59e-12;6!UBERON:0003293;2.59e-12;6!UBERON:0003294;2.59e-12;6!UBERON:0010047;2.59e-12;6!UBERON:0003408;2.59e-12;6!UBERON:0000167;2.59e-12;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.39e-66,1;UBERON:0006518,2.39e-66,1;UBERON:0008949,2.39e-66,1;UBERON:0000101,2.39e-66,1;UBERON:0002167,2.39e-66,1;UBERON:0001044,2.74e-12,6;UBERON:0003293,2.74e-12,6;UBERON:0003294,2.74e-12,6;UBERON:0010047,2.74e-12,6;UBERON:0000167,2.74e-12,6;UBERON:0003408,6.56e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539209063845416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.427149650270779,0.943225830597996,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.18628920882415,0,0.74988244777264,0,0,0,0,5.36207805860053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38251932362818,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0.213233981900981,0.476128862927481,0.0645889098360061,0,0,0,0,0,0,0,0.502055437748735,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p15@TP73 | |||
}} |
Revision as of 15:59, 10 January 2014
Short description: | p15@TP73 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_TP73_5end |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | 71bp_to_ENST00000378280, ENST00000378285, ENST00000378288, NM_001126240, NM_001126241, NM_001126242, NM_001204189, NM_001204190, NM_001204191, uc001akr.2, uc001aks.2, uc009vlk.1, uc010nzj.1_5end |
EntrezGene: | TP73 |
HGNC: | 12003 |
UniProt: | O15350 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.61e-34 | 2 |
acinar cell of salivary gland | 4.09e-23 | 3 |
keratinocyte | 1.40e-14 | 5 |
acinar cell | 1.83e-14 | 5 |
stratified squamous epithelial cell | 2.19e-12 | 6 |
keratin accumulating cell | 2.19e-12 | 6 |
stratified epithelial cell | 2.19e-12 | 6 |
keratinizing barrier epithelial cell | 2.19e-12 | 6 |
epithelial fate stem cell | 2.19e-12 | 6 |
stratified epithelial stem cell | 2.19e-12 | 6 |
surface ectodermal cell | 2.19e-12 | 6 |
protein secreting cell | 2.74e-12 | 6 |
epidermal cell | 1.04e-08 | 9 |
glandular epithelial cell | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.39e-66 | 1 |
right lung lobe | 2.39e-66 | 1 |
lower lobe of lung | 2.39e-66 | 1 |
lobe of lung | 2.39e-66 | 1 |
right lung | 2.39e-66 | 1 |
saliva-secreting gland | 2.74e-12 | 6 |
gland of oral region | 2.74e-12 | 6 |
gland of foregut | 2.74e-12 | 6 |
oral gland | 2.74e-12 | 6 |
oral cavity | 2.74e-12 | 6 |
gland of gut | 6.56e-08 | 10 |