FFCP PHASE1:Hg19::chr1:43736292..43736303,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=128218 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28275 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=35bp_to_uc001cis.2_5end | |||
|description=CAGE_peak_3_at_TMEM125_5end | |||
|id=chr1:43736292..43736303,+ | |||
|ontology_enrichment_celltype=CL:0000039!5.17e-10!7;CL:0000586!5.17e-10!7;CL:0000066!1.73e-09!254;CL:0002322!6.65e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002149;1.17e-09;6!CL:0002255;1.17e-09;6!CL:0000039;1.73e-08;7!CL:0000586;1.73e-08;7!CL:0000167;7.99e-08;1!CL:0000164;7.99e-08;1!CL:0000502;7.99e-08;1!CL:0000172;7.99e-08;1!CL:0000173;7.99e-08;1!CL:0002032;2.82e-07;1!CL:0000557;2.82e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,1.25e-09,6;CL:0002255,1.25e-09,6;CL:0000039,2.13e-08,7;CL:0000586,2.13e-08,7;CL:0000167,8.54e-08,1;CL:0000164,8.54e-08,1;CL:0000502,8.54e-08,1;CL:0000172,8.54e-08,1;CL:0000173,8.54e-08,1;CL:0002351,8.54e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002351;7.99e-08;1!UBERON:0005754;1.25e-07;1!UBERON:0006298;2.82e-07;1 | |||
|ontology_enrichment_disease=DOID:305!8.56e-18!106;DOID:0050687!2.50e-13!143;DOID:1749!6.20e-09!14;DOID:299!4.29e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3001;1.17e-09;6!DOID:4430;7.99e-08;1!DOID:0050619;9.39e-08;1!DOID:1357;9.39e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,1.25e-09,6;DOID:4430,8.54e-08,1;DOID:0050619,9.10e-08,1;DOID:1357,9.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.57e-12!169;UBERON:0000925!4.57e-12!169;UBERON:0006595!4.57e-12!169;UBERON:0001007!7.89e-12!155;UBERON:0001555!7.89e-12!155;UBERON:0007026!7.89e-12!155;UBERON:0000464!1.75e-11!104;UBERON:0004921!2.74e-10!129;UBERON:0004185!2.74e-10!129;UBERON:0000466!3.37e-10!126;UBERON:0005156!3.59e-09!59;UBERON:0000990!3.59e-09!59;UBERON:0000077!2.41e-08!130;UBERON:0007023!4.58e-08!115;UBERON:0002553!5.38e-08!70;UBERON:0003133!6.87e-08!48;UBERON:0005911!9.81e-08!82;UBERON:0005153!4.87e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;2.06e-13;2!UBERON:0006947;4.14e-09;3!UBERON:0004054;4.14e-09;3!UBERON:0003135;4.45e-09;11!UBERON:0001764;9.39e-08;1!UBERON:0001825;9.39e-08;1!UBERON:0000998;1.25e-07;1!UBERON:0006868;1.25e-07;1!UBERON:0000473;1.76e-07;8!UBERON:0001000;2.82e-07;1!UBERON:0001736;2.82e-07;1!UBERON:0005352;2.82e-07;1!UBERON:0003296;3.97e-07;4!UBERON:0010133;3.97e-07;4!UBERON:0004175;4.76e-07;21!UBERON:0001052;4.91e-07;4!UBERON:0005904;4.91e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.99e-13,2;UBERON:0006947,4.68e-09,3;UBERON:0004054,4.68e-09,3;UBERON:0003135,5.87e-09,11;UBERON:0001764,9.10e-08,1;UBERON:0001825,9.10e-08,1;UBERON:0000998,1.03e-07,1;UBERON:0006868,1.03e-07,1;UBERON:0000473,2.06e-07,8;UBERON:0001736,2.50e-07,1;UBERON:0006298,2.50e-07,1;UBERON:0001000,4.09e-07,1;UBERON:0005352,4.09e-07,1;UBERON:0001052,4.49e-07,4;UBERON:0003296,4.77e-07,4;UBERON:0010133,4.77e-07,4;UBERON:0005904,5.38e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,2.09340350391728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.851363990735132,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.265059536642971,0.348581828608555,0.932949495138334,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.614942192715568,0,0,0,0.100528972411631,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,1.87467667973554,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,1.28913384510255,0,0,0,0,0.539107359730903,0,0,0.422206515571503,0,0,0,0,0.270946437543853,1.00337954770971,0.254876273045038,0,0,0,0,0,0.656029291399411,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,1.92199783625545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0.140669416410513,0,0,0,0.19924798825107,0.552567831062295,0.251932747854276,0,0,0,0.539210106883961,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0.962059999958153,0,0.1137934482855,0.508507300585533,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.922255617552241,0.897576444097721,2.49888955420619,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,1.46909527343233,2.12029607150911,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0,0,0,0.978323094660449,0,1.18375320854817,1.20990716048664,0,0,0,0,0,0,0,0,1.42304773014896,0,1.21491816834592,0.0979923974143777,0,0.698906672968121,0,0,0,0,0,0,0.225980740780532,0,0,0.189932387867636,0.586654148204409,0.0801588202515337,0.640358984218058,0,0.288180834308212,0,0,0,0,0.707082103850386,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0.717873024576814,0.798716001995964,0.429226048136571,0,0,0,9.31967596219631,0,0,0,0,0,0,0,0.643012593860077,0.687697182986169,0.83088067605837,0,0,0.0607495566580247,0,1.97014268247995,0.996637174564964,0,0,1.34340638123612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.213574825135389,0.314408610199332,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,3.61224421375539,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0.633936370075881,0,0,0,0,0,1.258915569475,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.687034029507179,0.11796972334774,0,0.346576998451015,0,0,0,0.150420656698515,0.20170506870352,4.68908406739856,0,0.49131575253029,0.591424344868181,0,0,0,0.0634158101939068,0,0.548257766857182,0,0,0.638812138197976,0,0,4.85572483389305,1.13831095675649,0.177404740325278,0.115233987555779,0,0,0,0.118193840883968,0.222462803784138,0.235479278551542,0,1.40136081656895,0,0,0,0.428859265059938,0,0,0,0,0,0,0.691259661814092,3.44181887056222,0,0,2.54032230114557,2.06196181689645,0,0,0.447421727191169,0.490751168076215,0,0,0,0,0,0.701818390386317,0.198950775161368,0,0.22589216407792,0.109940516745429,5.73658805553359,0.617393264863557,0.218559560503957,1.41095188908457,0,4.47785439493089,0,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0.320965466756673,0,1.37618785021362,0,0,0.135982980381829,0.436350690340377,0.5290268405154,0,0,0,0.504665699340316,0.546327859818478,0,0.203977659483963,0.26721740526556,2.11358268930143,1.0028301571695,0,0,0,0,0.426467963801962,0.714193294391221,0.0645889098360061,0,0.112131862580613,2.29129769801394,0.808468755832877,0.217716747896961,0,0,0.645499848534087,1.33064142618405,0.407016343054873,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | |||
|short_description=p3@TMEM125 | |||
}} |
Revision as of 18:11, 10 January 2014
Short description: | p3@TMEM125 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM125_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_uc001cis.2_5end |
EntrezGene: | TMEM125 |
HGNC: | 28275 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 1.25e-09 | 6 |
stromal cell of endometrium | 1.25e-09 | 6 |
germ line cell | 2.13e-08 | 7 |
germ cell | 2.13e-08 | 7 |
peptide hormone secreting cell | 8.54e-08 | 1 |
enteroendocrine cell | 8.54e-08 | 1 |
type D enteroendocrine cell | 8.54e-08 | 1 |
somatostatin secreting cell | 8.54e-08 | 1 |
pancreatic D cell | 8.54e-08 | 1 |
progenitor cell of endocrine pancreas | 8.54e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 2.99e-13 | 2 |
male genital duct | 4.68e-09 | 3 |
internal male genitalia | 4.68e-09 | 3 |
male reproductive organ | 5.87e-09 | 11 |
maxillary sinus | 9.10e-08 | 1 |
paranasal sinus | 9.10e-08 | 1 |
seminal vesicle | 1.03e-07 | 1 |
seminal fluid secreting gland | 1.03e-07 | 1 |
testis | 2.06e-07 | 8 |
submandibular gland | 2.50e-07 | 1 |
submandibular gland primordium | 2.50e-07 | 1 |
vas deferens | 4.09e-07 | 1 |
spermatic cord | 4.09e-07 | 1 |
rectum | 4.49e-07 | 4 |
gland of diencephalon | 4.77e-07 | 4 |
neuroendocrine gland | 4.77e-07 | 4 |
duct of male reproductive system | 5.38e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.25e-09 | 6 |
somatostatinoma | 8.54e-08 | 1 |
paranasal sinus cancer | 9.10e-08 | 1 |
maxillary sinus cancer | 9.10e-08 | 1 |