FFCP PHASE1:Hg19::chr1:46647115..46647118,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:46647115..46647118,- | |||
|id=chr1:46647115..46647118,- | |||
|ontology_enrichment_celltype=CL:0002076!4.49e-18!43;CL:0000066!5.89e-16!254;CL:0000223!2.32e-15!59;CL:0002368!3.81e-12!13;CL:0002328!2.79e-11!3;CL:0002202!1.20e-09!9;CL:0002632!1.20e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0002202;1.63e-35;9!CL:0002632;1.63e-35;9!CL:0000307;1.59e-27;3!CL:0002328;3.11e-27;3!CL:0002368;9.22e-25;13!CL:0002076;9.77e-15;42!CL:0002535;3.18e-11;2!CL:0002231;6.56e-08;3!CL:0002621;6.56e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,1.05e-35,9;CL:0002632,1.05e-35,9;CL:0002328,1.39e-27,3;CL:0000068,1.82e-27,3;CL:0000069,1.82e-27,3;CL:0000307,1.82e-27,3;CL:0000377,1.82e-27,3;CL:0002368,6.79e-25,13;CL:0002076,7.41e-23,42;CL:0000223,1.62e-16,58;CL:0002535,3.02e-11,2;CL:0002621,5.93e-08,3;CL:0002231,8.29e-08,3;CL:0000066,2.35e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000377;1.59e-27;3!CL:0000223;1.60e-10;58 | |||
|ontology_enrichment_disease=DOID:305!2.26e-12!106;DOID:0050687!2.60e-09!143;DOID:1749!7.42e-08!14;DOID:4074!2.02e-07!2;DOID:4905!2.02e-07!2;DOID:3498!2.02e-07!2;DOID:3493!2.78e-07!2;DOID:299!5.02e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.86e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.90e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0004815!2.79e-11!3;UBERON:0002031!2.79e-11!3;UBERON:0004119!6.07e-10!169;UBERON:0000925!6.07e-10!169;UBERON:0006595!6.07e-10!169;UBERON:0002185!1.52e-08!4;UBERON:0007196!3.49e-08!14;UBERON:0001558!3.49e-08!14;UBERON:0004807!5.61e-08!28;UBERON:0001007!6.35e-08!155;UBERON:0001555!6.35e-08!155;UBERON:0007026!6.35e-08!155;UBERON:0001004!1.05e-07!72;UBERON:0000065!2.01e-07!53;UBERON:0005911!3.32e-07!82;UBERON:0005153!4.81e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;3.11e-27;3!UBERON:0002031;3.11e-27;3!UBERON:0007196;1.58e-21;15!UBERON:0001558;1.58e-21;15!UBERON:0000997;1.69e-21;1!UBERON:0005056;1.69e-21;1!UBERON:0004176;1.69e-21;1!UBERON:0002185;8.81e-17;5!UBERON:0003126;2.12e-12;7!UBERON:0001005;2.12e-12;7!UBERON:0000485;2.81e-12;7!UBERON:0006955;3.18e-11;2!UBERON:0004801;3.18e-11;2!UBERON:0005178;4.24e-10;34!UBERON:0002224;4.24e-10;34!UBERON:0005181;8.98e-09;35!UBERON:0004807;9.81e-09;22!UBERON:0000072;1.79e-08;37!UBERON:0001949;6.56e-08;3!UBERON:0000065;2.07e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.39e-27,3;UBERON:0002031,1.39e-27,3;UBERON:0007196,1.21e-21,15;UBERON:0001558,1.21e-21,15;UBERON:0000997,1.53e-21,1;UBERON:0005056,1.53e-21,1;UBERON:0002185,5.45e-17,5;UBERON:0003126,2.24e-12,7;UBERON:0001005,2.24e-12,7;UBERON:0006955,3.02e-11,2;UBERON:0004801,3.02e-11,2;UBERON:0000485,7.08e-10,9;UBERON:0005178,8.96e-10,34;UBERON:0002224,8.96e-10,34;UBERON:0005181,1.67e-09,35;UBERON:0008947,8.86e-09,38;UBERON:0003258,8.86e-09,38;UBERON:0001949,5.93e-08,3;UBERON:0000072,3.75e-07,47;UBERON:0004807,4.73e-07,28;UBERON:0001004,7.52e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.50602959389125,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,1.36373060295417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0.276242966807689,0,0,0,0.451199612907412,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01090682660736,1.08890984861323,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0.23874448473769,0,0.614321404198464,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.787139999965761,0,0.1137934482855,0,0.945550727071745,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.391329237864179,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,1.04135843001079,2.44980993535944,1.30588809870604,0,0.171986032471617,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0.977756913674015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0.955538938977433,0,0.098150233615243,0.853425474875886,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0.0644578879735772,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0.112131862580613,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:46647115..46647118,- | |||
}} |
Revision as of 18:23, 10 January 2014
Short description: | p@chr1:46647115..46647118, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:46647115..46647118, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 1.05e-35 | 9 |
epithelial cell of lower respiratory tract | 1.05e-35 | 9 |
bronchial epithelial cell | 1.39e-27 | 3 |
duct epithelial cell | 1.82e-27 | 3 |
branched duct epithelial cell | 1.82e-27 | 3 |
tracheal epithelial cell | 1.82e-27 | 3 |
tracheoblast | 1.82e-27 | 3 |
respiratory epithelial cell | 6.79e-25 | 13 |
endo-epithelial cell | 7.41e-23 | 42 |
endodermal cell | 1.62e-16 | 58 |
epithelial cell of cervix | 3.02e-11 | 2 |
gingival epithelial cell | 5.93e-08 | 3 |
epithelial cell of prostate | 8.29e-08 | 3 |
epithelial cell | 2.35e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.39e-27 | 3 |
epithelium of bronchus | 1.39e-27 | 3 |
tracheobronchial tree | 1.21e-21 | 15 |
lower respiratory tract | 1.21e-21 | 15 |
mammalian vulva | 1.53e-21 | 1 |
external female genitalia | 1.53e-21 | 1 |
bronchus | 5.45e-17 | 5 |
trachea | 2.24e-12 | 7 |
respiratory airway | 2.24e-12 | 7 |
uterine epithelium | 3.02e-11 | 2 |
cervix epithelium | 3.02e-11 | 2 |
simple columnar epithelium | 7.08e-10 | 9 |
thoracic cavity element | 8.96e-10 | 34 |
thoracic cavity | 8.96e-10 | 34 |
thoracic segment organ | 1.67e-09 | 35 |
respiratory primordium | 8.86e-09 | 38 |
endoderm of foregut | 8.86e-09 | 38 |
gingival epithelium | 5.93e-08 | 3 |
segment of respiratory tract | 3.75e-07 | 47 |
respiratory system epithelium | 4.73e-07 | 28 |
respiratory system | 7.52e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.90e-13 | 14 |