FFCP PHASE1:Hg19::chr1:100435315..100435325,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23443 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11023 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y2D2,Q9BSB7 | |||
|association_with_transcript=-19bp_to_ENST00000370155,ENST00000465289_5end | |||
|coexpression_cluster_id=C211 | |||
|description=CAGE_peak_8_at_SLC35A3_5end | |||
|id=chr1:100435315..100435325,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.25e-08!12;CL:0000417!1.25e-08!12;CL:0000668!1.25e-08!12;CL:0000414!1.25e-08!12;CL:0000412!1.25e-08!12;CL:0000182!1.25e-08!12;CL:0000083!4.57e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.39e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.64e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.97e-19;1!UBERON:0004161;1.78e-07;11 | |||
|ontology_enrichment_disease=DOID:1793!4.57e-07!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.98e-16!27;UBERON:0005409!1.06e-13!35;UBERON:0004921!5.88e-12!129;UBERON:0004185!5.88e-12!129;UBERON:0001007!1.91e-11!155;UBERON:0001555!1.91e-11!155;UBERON:0007026!1.91e-11!155;UBERON:0009497!3.42e-10!25;UBERON:0000015!3.42e-10!25;UBERON:0002423!3.42e-10!25;UBERON:0006235!3.42e-10!25;UBERON:0004161!3.42e-10!25;UBERON:0000059!4.39e-10!11;UBERON:0004119!7.33e-10!169;UBERON:0000925!7.33e-10!169;UBERON:0006595!7.33e-10!169;UBERON:0002110!2.03e-09!3;UBERON:0006242!2.03e-09!3;UBERON:0003929!6.46e-09!54;UBERON:0001155!9.22e-09!9;UBERON:0000077!1.19e-08!130;UBERON:0002417!1.35e-07!61;UBERON:0000916!1.35e-07!61;UBERON:0009854!2.77e-07!23;UBERON:0002075!4.21e-07!18;UBERON:0002107!4.92e-07!19;UBERON:0006925!4.92e-07!19;UBERON:0008836!4.92e-07!19;UBERON:0000949!5.37e-07!45;UBERON:0002108!7.26e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.55e-25;17!UBERON:0005409;9.46e-20;22!UBERON:0002108;1.68e-15;4!UBERON:0000059;1.94e-15;11!UBERON:0004921;1.25e-13;33!UBERON:0002423;6.66e-12;25!UBERON:0001007;1.51e-09;81!UBERON:0002107;3.33e-09;19!UBERON:0006925;3.33e-09;19!UBERON:0001155;4.90e-09;9!UBERON:0002110;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.69e-25,17;UBERON:0005409,1.42e-17,25;UBERON:0002108,1.40e-15,4;UBERON:0000059,1.68e-15,11;UBERON:0009497,7.80e-12,25;UBERON:0000015,7.80e-12,25;UBERON:0002423,7.80e-12,25;UBERON:0006235,7.80e-12,25;UBERON:0004161,7.80e-12,25;UBERON:0001007,1.91e-09,145;UBERON:0001555,1.91e-09,145;UBERON:0007026,1.91e-09,145;UBERON:0004921,2.81e-09,118;UBERON:0002107,3.52e-09,19;UBERON:0006925,3.52e-09,19;UBERON:0008836,3.52e-09,19;UBERON:0001155,5.00e-09,9;UBERON:0004119,1.67e-08,160;UBERON:0000925,1.67e-08,160;UBERON:0006595,1.67e-08,160;UBERON:0008835,5.26e-08,22;UBERON:0003894,5.26e-08,22;UBERON:0009854,1.11e-07,23;UBERON:0002110,3.35e-07,3;UBERON:0006242,3.35e-07,3;UBERON:0007499,4.14e-07,25;UBERON:0009856,7.41e-07,26 | |||
|phase1_expression=0,0,0.563817616383885,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,3.80265104465493,0.982827216677626,1.18157981336281,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0,0.362578348774867,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0.282706142867882,0,0.995261931078505,1.68069372556344,3.66618086960175,0,0,0,0,0,0,0,0,0.242780379534093,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0.0801588202515337,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.247247575143499,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,1.61207457045891,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82631744101899,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0.109940516745429,0,3.70435958918134,1.74847648403166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0.0673520530145875,0.358611026963382,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p8@SLC35A3 | |||
}} |
Revision as of 19:46, 10 January 2014
Short description: | p8@SLC35A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SLC35A3_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | -19bp_to_ENST00000370155, ENST00000465289_5end |
EntrezGene: | SLC35A3 |
HGNC: | 11023 |
UniProt: | Q9Y2D2Q9BSB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.64e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.69e-25 | 17 |
gastrointestinal system | 1.42e-17 | 25 |
small intestine | 1.40e-15 | 4 |
large intestine | 1.68e-15 | 11 |
epithelium of foregut-midgut junction | 7.80e-12 | 25 |
anatomical boundary | 7.80e-12 | 25 |
hepatobiliary system | 7.80e-12 | 25 |
foregut-midgut junction | 7.80e-12 | 25 |
septum transversum | 7.80e-12 | 25 |
digestive system | 1.91e-09 | 145 |
digestive tract | 1.91e-09 | 145 |
primitive gut | 1.91e-09 | 145 |
subdivision of digestive tract | 2.81e-09 | 118 |
liver | 3.52e-09 | 19 |
digestive gland | 3.52e-09 | 19 |
liver bud | 3.52e-09 | 19 |
colon | 5.00e-09 | 9 |
endoderm-derived structure | 1.67e-08 | 160 |
endoderm | 1.67e-08 | 160 |
presumptive endoderm | 1.67e-08 | 160 |
hepatic diverticulum | 5.26e-08 | 22 |
liver primordium | 5.26e-08 | 22 |
digestive tract diverticulum | 1.11e-07 | 23 |
gallbladder | 3.35e-07 | 3 |
gall bladder primordium | 3.35e-07 | 3 |
epithelial sac | 4.14e-07 | 25 |
sac | 7.41e-07 | 26 |