FFCP PHASE1:Hg19::chr1:113063958..113063969,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2514 | |||
|description=CAGE_peak_at_chr1:113063958..113063969,+ | |||
|id=chr1:113063958..113063969,+ | |||
|ontology_enrichment_celltype=CL:0000077!1.21e-08!19 | |||
|ontology_enrichment_celltype_v019=CL:0000064;3.58e-16;3!CL:0000067;3.58e-16;3!CL:0005012;3.58e-16;3!CL:0002304;3.58e-16;3!CL:0002561;2.16e-11;2!CL:0000077;6.47e-10;19!CL:0002586;5.12e-08;3!CL:0000511;7.97e-07;1!CL:0002625;7.97e-07;1!CL:0000342;7.97e-07;1!CL:0002565;7.97e-07;1!CL:0000216;7.97e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,3.69e-16,3;CL:0000067,3.69e-16,3;CL:0005012,3.69e-16,3;CL:0002304,3.69e-16,3;CL:0002561,1.85e-11,2;CL:0000077,6.39e-10,19;CL:0002586,4.87e-08,3;CL:0000342,7.35e-07,1;CL:0002565,7.35e-07,1;CL:0000511,8.67e-07,1;CL:0002625,8.67e-07,1;CL:0000216,8.67e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;2.16e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.28e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0003075!7.68e-17!86;UBERON:0007284!7.68e-17!86;UBERON:0002346!4.71e-16!90;UBERON:0003056!7.22e-12!61;UBERON:0000033!1.44e-11!123;UBERON:0000153!3.06e-11!129;UBERON:0007811!3.06e-11!129;UBERON:0004121!8.60e-11!169;UBERON:0000924!1.62e-10!173;UBERON:0006601!1.62e-10!173;UBERON:0000481!2.52e-10!347;UBERON:0007625!7.67e-10!11;UBERON:0000475!1.14e-09!365;UBERON:0007023!2.42e-09!115;UBERON:0002616!5.94e-09!59;UBERON:0000970!1.37e-08!20;UBERON:0005743!2.19e-08!86;UBERON:0001049!4.85e-08!57;UBERON:0005068!4.85e-08!57;UBERON:0006241!4.85e-08!57;UBERON:0007135!4.85e-08!57;UBERON:0000955!5.56e-08!69;UBERON:0006238!5.56e-08!69;UBERON:0002104!5.88e-08!21;UBERON:0000020!7.54e-08!23;UBERON:0000019!9.12e-08!19;UBERON:0000047!9.12e-08!19;UBERON:0004088!9.12e-08!19;UBERON:0003072!9.12e-08!19;UBERON:0003071!9.12e-08!19;UBERON:0004128!9.12e-08!19;UBERON:0000073!1.01e-07!94;UBERON:0001016!1.01e-07!94;UBERON:0001032!2.54e-07!24;UBERON:0004456!2.54e-07!24;UBERON:0000064!5.26e-07!219;UBERON:0000119!7.66e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.16e-22;11!UBERON:0000488;2.80e-21;4!UBERON:0000970;9.45e-20;20!UBERON:0002104;9.77e-19;21!UBERON:0000020;5.68e-17;23!UBERON:0000019;1.34e-16;19!UBERON:0000047;1.34e-16;19!UBERON:0004088;1.34e-16;19!UBERON:0010230;1.34e-16;19!UBERON:0001032;3.36e-16;24!UBERON:0004456;3.36e-16;24!UBERON:0001778;3.58e-16;3!UBERON:0001775;3.58e-16;3!UBERON:0001456;6.70e-15;21!UBERON:0002203;3.05e-14;6!UBERON:0001768;3.05e-14;6!UBERON:0002200;3.05e-14;6!UBERON:0010371;4.40e-14;31!UBERON:0006876;1.13e-11;11!UBERON:0005933;2.16e-11;2!UBERON:0005942;2.16e-11;2!UBERON:0005932;2.16e-11;2!UBERON:0000966;3.69e-10;5!UBERON:0005388;3.69e-10;5!UBERON:0001802;3.69e-10;5!UBERON:0001801;3.12e-09;14!UBERON:0001781;5.12e-08;3!UBERON:0001782;5.12e-08;3!UBERON:0001136;7.97e-07;1!UBERON:0001343;7.97e-07;1!UBERON:0004910;7.97e-07;1!UBERON:0002506;7.97e-07;1!UBERON:0004813;7.97e-07;1!UBERON:0001769;7.97e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,9.75e-23,11;UBERON:0000488,2.68e-21,4;UBERON:0000970,1.06e-18,21;UBERON:0002104,1.06e-18,21;UBERON:0000020,3.60e-16,24;UBERON:0001032,3.60e-16,24;UBERON:0004456,3.60e-16,24;UBERON:0001778,3.69e-16,3;UBERON:0001775,3.69e-16,3;UBERON:0000019,9.98e-16,20;UBERON:0000047,9.98e-16,20;UBERON:0010312,9.98e-16,20;UBERON:0004088,9.98e-16,20;UBERON:0010230,9.98e-16,20;UBERON:0003072,9.98e-16,20;UBERON:0004128,9.98e-16,20;UBERON:0003071,9.98e-16,20;UBERON:0005085,3.72e-15,31;UBERON:0002203,2.96e-14,6;UBERON:0001768,2.96e-14,6;UBERON:0002200,2.96e-14,6;UBERON:0001456,3.49e-14,22;UBERON:0006876,1.30e-11,11;UBERON:0005933,1.85e-11,2;UBERON:0005942,1.85e-11,2;UBERON:0005932,1.85e-11,2;UBERON:0001801,2.92e-09,14;UBERON:0000966,1.60e-08,6;UBERON:0005388,1.60e-08,6;UBERON:0001802,1.60e-08,6;UBERON:0001782,4.87e-08,3;UBERON:0005424,4.87e-08,3;UBERON:0004145,1.08e-07,3;UBERON:0000033,1.71e-07,56;UBERON:0001444,3.66e-07,49;UBERON:0002506,7.35e-07,1;UBERON:0001769,7.35e-07,1;UBERON:0001136,8.67e-07,1;UBERON:0001343,8.67e-07,1;UBERON:0004910,8.67e-07,1;UBERON:0005154,8.67e-07,1;UBERON:0005295,8.67e-07,1;UBERON:0004813,8.67e-07,1;UBERON:0005297,8.67e-07,1;UBERON:0005294,8.67e-07,1;UBERON:0010141,8.67e-07,1;UBERON:0005891,8.67e-07,1;UBERON:0010371,9.13e-07,104 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0.218441372130172,0,0.495065411840187,0,0,0,0,0,1.35433163884467,0.204000691244253,0.626909442956176,0.572471974262113,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0.276350017785848,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0,0,0.486634870302636,1.51255707462509,3.32594096193846,1.05401742831751,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.298897361103602,0.23486899728753,0,0,0,0.122834317311768,0,0,1.23633464639278,0,0.718618141816238,0,0.125118519871964,0,0.438977620880838,0.30648779579902,0.600952235626387,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,2.42469085228218,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,1.39310378409594,2.16563844500876,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,3.60292401626904,0,0,0,0.0925884451585296,0.325808305310325,0,2.88662684050547,0.579652024875384,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,1.74384027533312,0.1466765716419,0,0,0,0,1.04007436911366,0.514414748524284,1.41849132023278,0,0.285955987316295,0,0,0,0.355391948742546,0,4.82303003295338,2.61460037580088,9.79735313584159,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,0.500170521059677,0.813795071099207,0,0,0.157702415033935,0,0,0,1.03473071292505,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.0920809889358963,0,0,0.917870904715969,0,0,0,0,0,0,0,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,1.28225062558195,5.9042636225947,0.650756789328606,0.309123034943167,0,0,0,0,3.21367859688319,0.193341436584244,0.308097234229289,0.307007349452259,0.137836572484531,0.644521469209642,0.580066775656914,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,1.116475108079,0.632758849437452,0.190630193923825,0.255897791311334,0,0,0,0.719489830333259,1.09814811894422,0.471249609382746,0,0,0,0.975267478179181,0,0,0,0.848432591722276,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0.294747123039363,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0.284136146806413,0,0.296964680832639,0,0,0.281338832821026,0,0.16480387422676,0.211125408127993,0.597743964753209,0,0,0.511343412510774,0,0,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0.260427761085233,0,0.724999575434793,0,0,0,0.344743373241465,0.583209226766509,0,0,0.361789315876224,0,0.110579259931225,0,0.438770794307945,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0.995261931078505,0.619202951523374,1.22206028986725,0.593042257361244,0.123563938946503,0,0.202203398942031,0.802577647298789,0.468528891450678,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.293977192243133,0,0.34945333648406,0,0,0.0730893170861856,0,0.387956065953678,0.0882561266915003,1.12990370390266,0,0,0.189932387867636,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,1.28929632425987,0,0.279282401272254,0.458320848023367,1.43574604915363,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.332787154610557,0.0620964029413835,0.276697269872462,0,0,0.285465333544967,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,1.26184898228651,0.770479321629213,0.428883182749851,0.521988583930423,0,0.231522474323834,0.244736704506468,0.895444205407437,8.33763907334625,5.92066933862509,0,0.38582807654183,0.168942440653073,0,0,0,0.414775308455192,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0.558644917973244,0,0,0,0,0.3062454773532,0.385375350578757,0,0.478901577171454,0.205116364240755,0,0.0691572524642179,0,0,0.392590874004102,0.11796972334774,0,0,0,0,0,0.601682626794058,0.20170506870352,0,0,0,0.147856086217045,0,0,0.413373593002368,0,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0.135939465953663,0,0,0,0.549451649953598,0.157115589916002,0,0.913158720509496,3.45484145949794,0,2.07281978112303,0,0,0,2.40513409419076,0,0,0,0,0,0.426067023795788,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.385870790539723,0,0,0.245148321753905,0,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| |||
|short_description=p@chr1:113063958..113063969,+ | |||
}} |
Revision as of 20:11, 10 January 2014
Short description: | p@chr1:113063958..113063969, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:113063958..113063969, + |
Coexpression cluster: | C2514_Mesothelial_mesothelioma_Retinal_retina_Meningeal_Smooth_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.69e-16 | 3 |
ciliated epithelial cell | 3.69e-16 | 3 |
multi-ciliated epithelial cell | 3.69e-16 | 3 |
non-pigmented ciliary epithelial cell | 3.69e-16 | 3 |
outer root sheath cell | 1.85e-11 | 2 |
mesothelial cell | 6.39e-10 | 19 |
retinal pigment epithelial cell | 4.87e-08 | 3 |
pigment cell (sensu Vertebrata) | 7.35e-07 | 1 |
iris pigment epithelial cell | 7.35e-07 | 1 |
androgen binding protein secreting cell | 8.67e-07 | 1 |
seminiferous tubule epithelial cell | 8.67e-07 | 1 |
Sertoli cell | 8.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.28e-11 | 2 |