FFCP PHASE1:Hg19::chr1:154148671..154148694,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7170 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12012 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=23bp_to_ENST00000505010_5end | |||
|description=CAGE_peak_5_at_TPM3_5end | |||
|id=chr1:154148671..154148694,- | |||
|ontology_enrichment_celltype=CL:0002009!6.26e-08!65;CL:0002194!2.85e-07!63;CL:0000576!2.85e-07!63;CL:0000040!2.85e-07!63;CL:0000559!2.85e-07!63;CL:0000557!4.09e-07!71;CL:0000763!4.86e-07!112;CL:0000049!4.86e-07!112;CL:0000839!6.59e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.56e-09;39!CL:0000234;1.56e-09;39!CL:0000860;5.45e-08;33!CL:0002057;5.45e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.00e-10,48;CL:0000234,7.00e-10,48;CL:0002009,1.71e-08,61;CL:0000860,6.56e-08,42;CL:0002057,6.56e-08,42;CL:0000557,1.67e-07,67;CL:0002194,2.05e-07,59;CL:0000576,2.05e-07,59;CL:0000040,2.05e-07,59;CL:0000559,2.05e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;2.72e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0.522371256399677,0.245733936501509,0,0.218441372130172,1.31883489114227,0.247532705920093,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0,0.286235987131057,0.136874425072884,0.502170558379211,0.458480434487708,0.0821005894499457,0.472264687882075,0.786728553697808,0,0.154816123316076,0,0,0,0.0774672005803016,0,0.293600439334847,0,0.200544447470142,2.38711957787437,0,0,0,0.872389432677388,1.51150377475524,0.970336244751265,0.697287110717054,1.6446715520873,1.23882548358041,2.3015391385772,1.0246428261164,0.47296445977717,0,1.29096936716765,0,1.50593871634084,0.545812300115692,0.898893937780338,0.306083892370903,0.320929027076094,0.639337125799041,0.989553900560148,0.598390972864896,0,1.45104619314292,0,0.622822248995575,0.251248665256743,1.5644487552606,0.434377689410233,0.605399502633369,0,0,0.211255286311942,0.212604299965044,0,0.336985893439485,0.450530678524519,0,0.285012743741249,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0.473447805734733,0,0.445641827540694,0,0.443067789167242,0.541607727530031,0.128091319725675,0.520237390239513,0.493313713811028,0,0,0.14828656316206,0,0,0.339928028092699,0,0.34362744548263,0.506039384039006,0.318565414324097,0,0.950452044448374,0,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0.802320587350522,0.724122019413995,0,0,0.383587685530591,0,0,0.144846518960824,0.795285947051099,0.486634870302636,0.189069634328136,0,0.614843499851882,0.0654895377488563,0,0.370784442784429,0.97364218096405,0.348259474598534,0.398873881556595,0,0,0.371457501329565,0.596287222100115,0.860234595106124,0.347140501607594,0.56530794192401,0.838998872419812,2.20094433552054,0,0.775250277507987,0,0,1.20848795132744,0.760272105718513,0.732186172644509,0,0,0.535798369704479,0.44905874525234,0.225222960966644,0,0,0.916008719652036,0,0,0.436094052142534,0.496971951695318,0.886413581652058,0,0,0,0.560677600142307,0,0.49333509683432,0,0.404132016209064,0.653847612453835,0,0,0.234321431833797,0.936480230490962,0,0.597794722207204,0.117434498643765,0,0.140450806702248,0.408308342509787,0.859840221182376,0.103325781175765,0,0.247266929278557,0,0,0.336672227908132,0.250237039743928,0,0,0,0.150238058906597,0.226864366320042,0,0,0.211931901159562,0,0,0,0,0,0.194874010322397,0,0,0.161646056818812,0,0,0.169560592310488,0.193260853163297,0,0,0.121973706129595,0,0.116193942869518,0.414644220061482,1.00928340350251,0,0,0,0,0.464367928031979,0,0.354920400119532,0.505754070234305,0.482022059766964,0.772057809126758,0.217879444092406,0,1.21348177344148,0,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0.109750285408626,0,0.904760751704678,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0.469634776943287,0,0.462985512576611,1.71228737011138,0,0,0.246217006087397,0.468008530278475,0.594524649154913,0,0.16798212819886,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0.414656231081544,0.144119953416961,0.12624243342638,0.126995788584338,0.381988425558278,0,0,0.411309970813294,0.300343057843917,0,0,0,0.22001485746285,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0.499864955910285,0,1.50677127429638,2.10833939483032,0,0,0,0.289562613335158,0.61642896765115,0.179060963239896,0.896681151948218,0.591092280605782,1.72502059887614,0.77005821767849,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0.749007023947182,0,0,0.24538298343828,0,0.271265023699736,0.207970861530807,1.07057393278297,0.157702415033935,0.819989904948992,0,0,0,1.32845119707087,1.47495334833363,0.434418072340414,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0.30239029332968,0,0,0,0,0,0.321707842287215,0,0.154209693802656,0.710246901252508,0.0821271560138091,0,0.116210378459959,0.362578348774867,0,0.368323955743585,0.459257792658427,0.910455840033585,0.262248829918848,0,0,0,0,0.105551628892876,0,0.340187410553031,4.31831832204279,0,0,0,0,0,1.34324852833307,0.219259876645935,0.261435451024901,0,0.328014645699706,0,0.206082023295445,1.00726411300178,0,0,0.650060246036521,0,0,0,0,0.275673144969061,0.322260734604821,0.435050081742686,0.340906509664404,0,0,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,1.00187420719394,0.372158369359667,0,0.38126038784765,0,0.42793898803392,0.318203247925937,0,0.179872457583315,0,0.353437207037059,0.404364963146632,0,0.842516912477962,0.48763373908959,0.487426979262569,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0.92947049429925,0.563391205064483,0.143411352204052,0,0.35667105148125,0,0.211107635297664,0,0,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0.747768497892312,0,0.245040215981032,0.557409525377156,0,0.142283686696828,0.478278818186467,1.1974762285969,0,0.423347165447766,0.649243880549111,0.561594356226918,0.228234679033192,0.783399478865116,0,1.35433422241283,0.321176150207399,0.403599414382095,0,0.687010689511529,0.9217222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| |||
|short_description=p5@TPM3 | |||
}} |
Revision as of 21:07, 10 January 2014
Short description: | p5@TPM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TPM3_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000505010_5end |
EntrezGene: | TPM3 |
HGNC: | 12012 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.00e-10 | 48 |
phagocyte | 7.00e-10 | 48 |
macrophage dendritic cell progenitor | 1.71e-08 | 61 |
classical monocyte | 6.56e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.56e-08 | 42 |
granulocyte monocyte progenitor cell | 1.67e-07 | 67 |
monopoietic cell | 2.05e-07 | 59 |
monocyte | 2.05e-07 | 59 |
monoblast | 2.05e-07 | 59 |
promonocyte | 2.05e-07 | 59 |