FFCP PHASE1:Hg19::chr1:165873233..165873247,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7371 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12562 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-55bp_to_ENST00000475333_5end | |||
|coexpression_cluster_id=C1109 | |||
|description=CAGE_peak_6_at_UCK2_5end | |||
|id=chr1:165873233..165873247,+ | |||
|ontology_enrichment_celltype=CL:0002076!5.01e-15!43;CL:0002368!6.71e-12!13;CL:0000220!1.03e-09!246;CL:0000244!1.51e-09!4;CL:0000731!1.51e-09!4;CL:0002321!1.59e-09!248;CL:0000066!2.17e-09!254;CL:0000223!2.45e-09!59;CL:0002159!3.02e-09!13;CL:0002166!1.53e-07!3;CL:0002621!2.00e-07!3;CL:0002251!4.28e-07!21;CL:0002077!5.78e-07!33;CL:0002328!7.46e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.70e-27;13!CL:0000244;1.15e-24;4!CL:0000731;1.15e-24;4!CL:0002076;9.84e-21;42!CL:0002166;7.23e-19;3!CL:0002621;1.52e-18;3!CL:0002159;1.10e-14;14!CL:0002327;4.14e-13;4!CL:0000317;9.00e-13;2!CL:1000448;9.00e-13;2!CL:0002308;9.00e-13;2!CL:0002140;9.00e-13;2!CL:0002202;2.26e-10;9!CL:0002632;2.26e-10;9!CL:0000307;1.21e-08;3!CL:0002328;1.59e-08;3!CL:0002251;4.45e-07;20!CL:0002252;4.84e-07;1!CL:0002336;7.95e-07;1!CL:0002261;7.95e-07;1!CL:0002170;7.95e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.45e-27,13;CL:0000244,1.15e-24,4;CL:0000731,1.15e-24,4;CL:0002076,3.21e-24,42;CL:0002166,7.24e-19,3;CL:0002621,1.56e-18,3;CL:0000223,9.77e-17,58;CL:0002159,1.12e-14,14;CL:0002327,4.41e-13,4;CL:0000317,9.00e-13,2;CL:1000448,9.00e-13,2;CL:0002308,9.00e-13,2;CL:0002140,9.00e-13,2;CL:0000066,1.77e-12,253;CL:0002202,2.05e-10,9;CL:0002632,2.05e-10,9;CL:0000068,1.24e-08,3;CL:0000069,1.24e-08,3;CL:0000307,1.24e-08,3;CL:0000377,1.24e-08,3;CL:0002328,1.34e-08,3;CL:0002077,1.43e-07,34;CL:0002251,4.63e-07,20;CL:0002252,4.85e-07,1;CL:0002336,9.18e-07,1;CL:0002261,9.18e-07,1;CL:0002170,9.18e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000223;1.67e-09;58!CL:0000377;1.21e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3350;3.62e-12;2!DOID:6193;5.29e-07;1!DOID:3571;7.95e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3350,3.62e-12,2;DOID:6193,5.45e-07,1;DOID:3571,7.73e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002185!3.02e-08!4;UBERON:0007196!9.21e-08!14;UBERON:0001558!9.21e-08!14;UBERON:0000365!1.40e-07!5;UBERON:0001949!2.00e-07!3;UBERON:0001004!3.29e-07!72;UBERON:0004815!7.46e-07!3;UBERON:0002031!7.46e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;8.20e-24;12!UBERON:0000365;8.98e-20;5!UBERON:0001949;1.52e-18;3!UBERON:0005910;1.67e-16;6!UBERON:0001708;2.77e-14;4!UBERON:0008895;2.77e-14;4!UBERON:0001911;4.14e-13;4!UBERON:0002419;9.00e-13;2!UBERON:0007771;9.00e-13;2!UBERON:0003297;9.00e-13;2!UBERON:0001821;9.00e-13;2!UBERON:0003487;9.00e-13;2!UBERON:0001820;9.00e-13;2!UBERON:0011159;1.59e-11;5!UBERON:0005911;2.48e-09;36!UBERON:0004815;1.59e-08;3!UBERON:0002031;1.59e-08;3!UBERON:0003929;3.19e-08;7!UBERON:0003729;2.31e-07;13!UBERON:0003350;3.02e-07;8!UBERON:0001828;3.02e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,8.99e-20,5;UBERON:0001949,1.56e-18,3;UBERON:0005910,1.67e-16,6;UBERON:0001708,2.77e-14,4;UBERON:0008895,2.77e-14,4;UBERON:0001911,4.41e-13,4;UBERON:0005333,4.41e-13,4;UBERON:0008425,4.41e-13,4;UBERON:0005311,4.41e-13,4;UBERON:0002419,9.00e-13,2;UBERON:0007771,9.00e-13,2;UBERON:0003297,9.00e-13,2;UBERON:0001821,9.00e-13,2;UBERON:0003487,9.00e-13,2;UBERON:0001820,9.00e-13,2;UBERON:0005089,9.00e-13,2;UBERON:0005088,9.00e-13,2;UBERON:0011159,1.59e-11,5;UBERON:0004119,3.44e-10,160;UBERON:0000925,3.44e-10,160;UBERON:0006595,3.44e-10,160;UBERON:0010188,1.12e-09,6;UBERON:0002539,1.12e-09,6;UBERON:0008816,1.12e-09,6;UBERON:0001004,5.81e-09,74;UBERON:0004815,1.34e-08,3;UBERON:0002031,1.34e-08,3;UBERON:0003729,2.43e-07,13;UBERON:0003350,3.06e-07,8;UBERON:0001828,3.06e-07,8;UBERON:0000065,3.41e-07,54;UBERON:0000076,8.84e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,13.8554722637995,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,1.94653948121054,0,0.221729397462564,0,0,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0.402829317109147,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,3.48875241714027,0,0.12663051166458,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0,0.276149695926898,0,0,0.10075209822764,0,18.7463027568398,59.1859081682111,11.4721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31700342490351,0,0.502644862058154,1.20364978706088,0,0,0,0,0,0.577465791044295,0.462985512576611,0.190254152234598,0,0,0,0,0,58.1149770718017,35.1082647935616,27.9296941567501,1.16426079513703,1.45316969256981,2.68367875415648,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0,0,18.8476082085088,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.1191525958392,9.1008434445113,0,0,0,0,0,0,0,0,0,112.063172614743,16.5283457933991,26.2882187738843,5.6648357279108,0,0.31481234683064,0,0,0,0,0,0,0,0,0.762520775695299,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,1.21746226177622,0.30982349809975,0,0,0,0.7133421029625,0,0,0,0,0,5.00354986172663,7.37332503089366,0,0,42.1895265217805,32.0095803768489,29.2663901334206,155.752465340319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.435296032902013,0,2.40780445460263,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0.480952921509202,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0.295710299979268,0.159296767163702,0,0,0,1.06336685823198,0.521745061811734,0,0,0.406870733204662,0.181848659202559,0,0.464033759878494,0.398095888698616,1.60011105865261,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,1.08858373948481,0,0.26940821205835,0.286888821570705,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@UCK2 | |||
}} |
Revision as of 22:03, 10 January 2014
Short description: | p6@UCK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_UCK2_5end |
Coexpression cluster: | C1109_Urothelial_Small_Gingival_Mallassezderived_Prostate_Sebocyte_Bronchial |
Association with transcript: | -55bp_to_ENST00000475333_5end |
EntrezGene: | UCK2 |
HGNC: | 12562 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.45e-27 | 13 |
transitional epithelial cell | 1.15e-24 | 4 |
urothelial cell | 1.15e-24 | 4 |
endo-epithelial cell | 3.21e-24 | 42 |
epithelial cell of Malassez | 7.24e-19 | 3 |
gingival epithelial cell | 1.56e-18 | 3 |
endodermal cell | 9.77e-17 | 58 |
general ecto-epithelial cell | 1.12e-14 | 14 |
mammary gland epithelial cell | 4.41e-13 | 4 |
sebum secreting cell | 9.00e-13 | 2 |
epithelial cell of sweat gland | 9.00e-13 | 2 |
epithelial cell of skin gland | 9.00e-13 | 2 |
acinar cell of sebaceous gland | 9.00e-13 | 2 |
epithelial cell | 1.77e-12 | 253 |
epithelial cell of tracheobronchial tree | 2.05e-10 | 9 |
epithelial cell of lower respiratory tract | 2.05e-10 | 9 |
duct epithelial cell | 1.24e-08 | 3 |
branched duct epithelial cell | 1.24e-08 | 3 |
tracheal epithelial cell | 1.24e-08 | 3 |
tracheoblast | 1.24e-08 | 3 |
bronchial epithelial cell | 1.34e-08 | 3 |
ecto-epithelial cell | 1.43e-07 | 34 |
epithelial cell of alimentary canal | 4.63e-07 | 20 |
epithelial cell of esophagus | 4.85e-07 | 1 |
buccal mucosa cell | 9.18e-07 | 1 |
endothelial cell of viscerocranial mucosa | 9.18e-07 | 1 |
keratinized cell of the oral mucosa | 9.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
urothelium | 8.99e-20 | 5 |
gingival epithelium | 1.56e-18 | 3 |
transitional epithelium | 1.67e-16 | 6 |
jaw skeleton | 2.77e-14 | 4 |
splanchnocranium | 2.77e-14 | 4 |
mammary gland | 4.41e-13 | 4 |
mammary bud | 4.41e-13 | 4 |
mammary ridge | 4.41e-13 | 4 |
mammary placode | 4.41e-13 | 4 |
skin gland | 9.00e-13 | 2 |
epidermis gland | 9.00e-13 | 2 |
gland of integumental system | 9.00e-13 | 2 |
sebaceous gland | 9.00e-13 | 2 |
skin sebaceous gland | 9.00e-13 | 2 |
sweat gland | 9.00e-13 | 2 |
sweat gland placode | 9.00e-13 | 2 |
sebaceous gland placode | 9.00e-13 | 2 |
primary subdivision of cranial skeletal system | 1.59e-11 | 5 |
endoderm-derived structure | 3.44e-10 | 160 |
endoderm | 3.44e-10 | 160 |
presumptive endoderm | 3.44e-10 | 160 |
protuberance | 1.12e-09 | 6 |
pharyngeal arch | 1.12e-09 | 6 |
embryonic head | 1.12e-09 | 6 |
respiratory system | 5.81e-09 | 74 |
lower respiratory tract epithelium | 1.34e-08 | 3 |
epithelium of bronchus | 1.34e-08 | 3 |
mouth mucosa | 2.43e-07 | 13 |
epithelium of mucosa | 3.06e-07 | 8 |
gingiva | 3.06e-07 | 8 |
respiratory tract | 3.41e-07 | 54 |
external ectoderm | 8.84e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 3.62e-12 | 2 |
epithelioid sarcoma | 5.45e-07 | 1 |
liver cancer | 7.73e-07 | 1 |