FFCP PHASE1:Hg19::chr1:197036364..197036401,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=2165 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3534 | |||
|TSSclassifier=not | |||
|UniProt=P05160 | |||
|association_with_transcript=0bp_to_ENST00000367412,NM_001994,uc001gtt.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_F13B_5end | |||
|id=chr1:197036364..197036401,- | |||
|ontology_enrichment_celltype=CL:0000181!5.24e-30!12;CL:0000417!5.24e-30!12;CL:0000668!5.24e-30!12;CL:0000414!5.24e-30!12;CL:0000412!5.24e-30!12;CL:0000182!5.24e-30!12;CL:0000223!5.45e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;8.97e-37;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.26e-37,12;CL:0000223,6.74e-13,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.96e-28;11!UBERON:0009497;1.30e-23;13!UBERON:0001041;3.11e-10;30!CL:0000223;6.79e-10;58!UBERON:0003104;1.48e-09;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.03e-31!19;UBERON:0006925!7.03e-31!19;UBERON:0008836!7.03e-31!19;UBERON:0009497!1.91e-28!25;UBERON:0000015!1.91e-28!25;UBERON:0002423!1.91e-28!25;UBERON:0006235!1.91e-28!25;UBERON:0004161!1.91e-28!25;UBERON:0005057!2.81e-27!26;UBERON:0008835!1.73e-26!22;UBERON:0003894!1.73e-26!22;UBERON:0009854!2.80e-25!23;UBERON:0007499!3.78e-23!25;UBERON:0009856!3.31e-22!26;UBERON:0002365!2.09e-18!31;UBERON:0002330!2.09e-18!31;UBERON:0003929!6.21e-18!54;UBERON:0002368!3.82e-16!35;UBERON:0005172!1.43e-14!55;UBERON:0005173!1.43e-14!55;UBERON:0004921!1.91e-13!129;UBERON:0004185!1.91e-13!129;UBERON:0005911!4.38e-13!82;UBERON:0002417!5.98e-13!61;UBERON:0000916!5.98e-13!61;UBERON:0000949!3.00e-12!45;UBERON:0001007!3.84e-12!155;UBERON:0001555!3.84e-12!155;UBERON:0007026!3.84e-12!155;UBERON:0002530!3.59e-11!59;UBERON:0004119!7.32e-11!169;UBERON:0000925!7.32e-11!169;UBERON:0006595!7.32e-11!169;UBERON:0007190!2.06e-08!1;UBERON:0005177!6.66e-08!107;UBERON:0009569!2.26e-07!113;UBERON:0001041!2.35e-07!98;UBERON:0000077!2.47e-07!130;UBERON:0002405!4.06e-07!115;UBERON:0005409!5.79e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.88e-41;19!UBERON:0006925;5.88e-41;19!UBERON:0002423;5.58e-31;25!UBERON:0002365;6.19e-24;31!UBERON:0002330;6.19e-24;31!UBERON:0002108;1.03e-22;4!UBERON:0002368;1.30e-21;33!UBERON:0000949;4.23e-13;43!UBERON:0000160;2.91e-11;17!UBERON:0001007;9.71e-11;81!UBERON:0005172;2.92e-10;52!UBERON:0005173;2.92e-10;52!UBERON:0002530;5.54e-10;57!UBERON:0005409;7.28e-09;22!UBERON:0002417;9.10e-07;58!UBERON:0000916;9.10e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.04e-41,19;UBERON:0006925,6.04e-41,19;UBERON:0008836,6.04e-41,19;UBERON:0008835,2.80e-35,22;UBERON:0003894,2.80e-35,22;UBERON:0009854,1.02e-33,23;UBERON:0007499,5.70e-31,25;UBERON:0009497,5.70e-31,25;UBERON:0000015,5.70e-31,25;UBERON:0002423,5.70e-31,25;UBERON:0006235,5.70e-31,25;UBERON:0004161,5.70e-31,25;UBERON:0009856,9.36e-30,26;UBERON:0002365,7.55e-25,31;UBERON:0002330,7.55e-25,31;UBERON:0002108,9.93e-23,4;UBERON:0002368,6.27e-22,35;UBERON:0003929,7.99e-22,54;UBERON:0000949,6.80e-17,45;UBERON:0002530,4.65e-16,59;UBERON:0004921,5.07e-16,118;UBERON:0005911,5.59e-14,82;UBERON:0005172,5.98e-14,54;UBERON:0005173,5.98e-14,54;UBERON:0001007,9.28e-13,145;UBERON:0001555,9.28e-13,145;UBERON:0007026,9.28e-13,145;UBERON:0002417,1.78e-12,60;UBERON:0000916,1.78e-12,60;UBERON:0004119,2.05e-11,160;UBERON:0000925,2.05e-11,160;UBERON:0006595,2.05e-11,160;UBERON:0000160,2.87e-11,17;UBERON:0011216,5.44e-09,223;UBERON:0001041,2.40e-08,87;UBERON:0005409,7.21e-08,25;UBERON:0005256,3.14e-07,122;UBERON:0000490,3.44e-07,148;UBERON:0005177,4.53e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,121.684833428958,84.5231406342758,36.6289742142471,0,18.0793004658377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65890789101569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,111.799497637779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,115.137868350001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945398187686684,1.2362378757175,1.14586024552114,1.57483970423598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,107.276235052356,14.5757577803443,0,0,0.855434189421647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46630900405095,4.5897507705831,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@F13B | |||
}} |
Revision as of 23:04, 10 January 2014
Short description: | p1@F13B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_1_at_F13B_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000367412, NM_001994, uc001gtt.1_5end |
EntrezGene: | F13B |
HGNC: | 3534 |
UniProt: | P05160 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.26e-37 | 12 |
endodermal cell | 6.74e-13 | 58 |