FFCP PHASE1:Hg19::chr1:236861252..236861256,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_at_chr1:236861252..236861256,+ | |||
|id=chr1:236861252..236861256,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;3.26e-11;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;3.99e-50;1!UBERON:0004872;2.18e-08;7 | |||
|ontology_enrichment_disease=DOID:171!3.24e-13!10 | |||
|ontology_enrichment_disease_v019=DOID:171;9.44e-21;10!DOID:3095;4.74e-10;22!DOID:2994;4.74e-10;22!DOID:169;1.44e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,9.44e-21,10;DOID:3095,4.74e-10,22;DOID:2994,4.74e-10,22;DOID:169,1.57e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.23e-13!115;UBERON:0002133!5.45e-12!2;UBERON:0009663!6.19e-12!7;UBERON:0002346!1.35e-09!90;UBERON:0002308!2.63e-09!9;UBERON:0002420!2.63e-09!9;UBERON:0000125!2.63e-09!9;UBERON:0007245!2.63e-09!9;UBERON:0010009!2.63e-09!9;UBERON:0010011!2.63e-09!9;UBERON:0000454!2.63e-09!9;UBERON:0000924!2.20e-08!173;UBERON:0006601!2.20e-08!173;UBERON:0004151!2.58e-08!3;UBERON:0003978!2.87e-08!3;UBERON:0009751!2.87e-08!3;UBERON:0000946!2.87e-08!3;UBERON:0002523!2.87e-08!3;UBERON:0005983!2.87e-08!3;UBERON:0002165!2.87e-08!3;UBERON:0002062!2.87e-08!3;UBERON:0007280!2.87e-08!3;UBERON:0001723!4.09e-08!3;UBERON:0001033!4.09e-08!3;UBERON:0010056!4.09e-08!3;UBERON:0005383!7.14e-08!3;UBERON:0005382!7.14e-08!3;UBERON:0001049!5.49e-07!57;UBERON:0005068!5.49e-07!57;UBERON:0006241!5.49e-07!57;UBERON:0007135!5.49e-07!57;UBERON:0002426!5.58e-07!1;UBERON:0003831!5.58e-07!1;UBERON:0003898!5.58e-07!1;UBERON:0004830!5.58e-07!1;UBERON:0001774!5.58e-07!1;UBERON:0003830!5.58e-07!1;UBERON:0005175!5.58e-07!1;UBERON:0003897!5.58e-07!1;UBERON:0001103!5.58e-07!1;UBERON:0010084!5.58e-07!1;UBERON:0002134!6.96e-07!1;UBERON:0005208!6.96e-07!1;UBERON:0005946!6.96e-07!1;UBERON:0005965!6.96e-07!1;UBERON:0002078!6.96e-07!1;UBERON:0002084!7.77e-07!1;UBERON:0002082!7.77e-07!1;UBERON:0004706!7.77e-07!1;UBERON:0002135!9.15e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;1.46e-50;1!UBERON:0003831;1.46e-50;1!UBERON:0003898;1.46e-50;1!UBERON:0004830;1.46e-50;1!UBERON:0003830;1.46e-50;1!UBERON:0005175;1.46e-50;1!UBERON:0001774;1.46e-50;1!UBERON:0001103;1.46e-50;1!UBERON:0005090;4.32e-26;2!UBERON:0001630;4.32e-26;2!UBERON:0002346;1.13e-13;4!UBERON:0000923;1.13e-13;4!UBERON:0010316;1.13e-13;4!UBERON:0005291;1.13e-13;4!UBERON:0000013;3.26e-11;5!UBERON:0002410;3.26e-11;5!UBERON:0002050;3.26e-11;5!UBERON:0005423;3.26e-11;5!UBERON:0000922;3.81e-08;49!UBERON:0000010;8.37e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,1.46e-50,1;UBERON:0003831,1.46e-50,1;UBERON:0003898,1.46e-50,1;UBERON:0004830,1.46e-50,1;UBERON:0003830,1.46e-50,1;UBERON:0005175,1.46e-50,1;UBERON:0001774,1.46e-50,1;UBERON:0001103,1.46e-50,1;UBERON:0010084,1.46e-50,1;UBERON:0005090,4.32e-26,2;UBERON:0001630,4.32e-26,2;UBERON:0000013,3.60e-11,5;UBERON:0002410,3.60e-11,5;UBERON:0000010,8.85e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01288823649394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0,0.717873024576814,0,0,0.223171457441873,1.47803639470798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,1.10086159299127,0,0,1.91317428091515,0.619678821295011,0,0,0,0,0,0,0,0,0,0,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.310298987585686,0.213233981900981,0,0,0,0,0,0.202117188958219,0.217716747896961,0.684466602170562,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:236861252..236861256,+ | |||
}} |
Revision as of 00:56, 11 January 2014
Short description: | p@chr1:236861252..236861256, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr1:236861252..236861256, + |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chest muscle | 1.46e-50 | 1 |
respiratory system muscle | 1.46e-50 | 1 |
skeletal muscle of trunk | 1.46e-50 | 1 |
respiratory system skeletal muscle | 1.46e-50 | 1 |
thoracic segment muscle | 1.46e-50 | 1 |
chest organ | 1.46e-50 | 1 |
muscle of trunk | 1.46e-50 | 1 |
diaphragm | 1.46e-50 | 1 |
future diaphragm | 1.46e-50 | 1 |
muscle structure | 4.32e-26 | 2 |
muscle organ | 4.32e-26 | 2 |
sympathetic nervous system | 3.60e-11 | 5 |
autonomic nervous system | 3.60e-11 | 5 |
peripheral nervous system | 8.85e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 9.44e-21 | 10 |
germ cell and embryonal cancer | 4.74e-10 | 22 |
germ cell cancer | 4.74e-10 | 22 |
neuroendocrine tumor | 1.57e-09 | 6 |