FFCP PHASE1:Hg19::chr10:8097228..8097239,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2625 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4172 | |||
|TSSclassifier=strong | |||
|UniProt=P23771 | |||
|association_with_transcript=-178bp_to_X55122_5end | |||
|description=CAGE_peak_13_at_GATA3_5end | |||
|id=chr10:8097228..8097239,+ | |||
|ontology_enrichment_celltype=CL:0000084!2.12e-13!25;CL:0000827!2.12e-13!25;CL:0000791!9.89e-10!18;CL:0000789!9.89e-10!18;CL:0002420!9.89e-10!18;CL:0002419!9.89e-10!18;CL:0000790!9.89e-10!18;CL:0000838!3.26e-09!52;CL:0000542!5.99e-09!53;CL:0000051!5.99e-09!53;CL:0000039!7.59e-08!7;CL:0000586!7.59e-08!7;CL:0002541!7.94e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.88e-30;3!CL:0002536;1.05e-20;2!CL:0000349;2.71e-18;19!CL:0000039;1.21e-13;7!CL:0000586;1.21e-13;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.10e-30,3;CL:0002536,7.05e-21,2;CL:0000349,2.06e-18,19;CL:0000039,1.29e-13,7;CL:0000586,1.29e-13,7 | |||
|ontology_enrichment_development_v019=UBERON:0008425;3.11e-11;1 | |||
|ontology_enrichment_disease=DOID:5093!4.71e-10!4;DOID:1612!4.71e-10!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.42e-23;4!DOID:1612;1.42e-23;4!DOID:1799;1.30e-11;1!DOID:10165;1.30e-11;1!DOID:1798;1.30e-11;1!DOID:170;1.23e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.01e-23,4;DOID:1612,1.01e-23,4;DOID:1799,1.18e-11,1;DOID:10165,1.18e-11,1;DOID:1798,1.18e-11,1;DOID:170,1.25e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.24e-14!14;UBERON:0000158!2.24e-14!14;UBERON:0000478!7.78e-09!24;UBERON:0000305!3.45e-08!7;UBERON:0000476!7.94e-08!3;UBERON:0000920!7.94e-08!3;UBERON:0003124!8.28e-08!7;UBERON:0004871!4.32e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.26e-35;10!UBERON:0000158;5.26e-35;10!UBERON:0003124;3.88e-30;3!UBERON:0000920;3.88e-30;3!UBERON:0000478;2.07e-14;24!UBERON:0000305;2.71e-13;7!UBERON:0000310;8.86e-10;10!UBERON:0001443;6.18e-09;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.10e-30,3;UBERON:0005631,4.25e-25,14;UBERON:0000158,4.25e-25,14;UBERON:0000478,1.67e-14,24;UBERON:0000305,1.81e-13,7;UBERON:0003124,2.77e-13,7;UBERON:0004871,7.42e-12,8;UBERON:0000310,7.76e-10,10;UBERON:0001443,5.48e-09,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.52908960491121,1.58260186937072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15148819429164,0.309632246632152,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.590129310341499,0,0.822405995998037,0.334372990781356,0,0,0,0.668462741311041,0.883817722424512,0,0,0.768547918354051,1.43065282315866,0.164437904603676,0.829050053357545,0,0.14828656316206,0,1.04535523804977,0.226618685395132,0.766440987203842,0.34362744548263,0.253019692019503,0,0,0,0.301150238155546,0,0,0.236777252044017,0.821127996921047,0.604820229674197,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,5.53143078571493,0.858486162094873,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0.131124414959424,0.451199612907412,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.853702120180969,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0,0.780103689942349,0,1.90995587790152,0.890894042497916,0.614321404198464,0,0,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,5.4689829827899,1.66173999992772,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15015027898508,2.06442582142476,1.4124158349861,1.91400695839152,1.19076871422421,1.06606955203727,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0.313932918407225,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.262272940674991,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,2.11444506695002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34833881285112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0.862598491173454,0,0.982886743728125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3571602503328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0.26721740526556,0.36757959813938,0,0,0,0,0,0,0,0.710478008196067,0.744896571550295,0,0,0.404234377916439,0,0,0,0.0717222053926763,0,0.488419611665847,0,0,0.0898252021065869,0,0,0,0.665756774185513,0,0 | |||
|short_description=p13@GATA3 | |||
}} |
Revision as of 01:39, 11 January 2014
Short description: | p13@GATA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_GATA3_5end |
Coexpression cluster: | NA |
Association with transcript: | -178bp_to_X55122_5end |
EntrezGene: | GATA3 |
HGNC: | 4172 |
UniProt: | P23771 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.10e-30 | 3 |
amniotic epithelial cell | 7.05e-21 | 2 |
extraembryonic cell | 2.06e-18 | 19 |
germ line cell | 1.29e-13 | 7 |
germ cell | 1.29e-13 | 7 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.10e-30 | 3 |
extraembryonic membrane | 4.25e-25 | 14 |
membranous layer | 4.25e-25 | 14 |
extraembryonic structure | 1.67e-14 | 24 |
amnion | 1.81e-13 | 7 |
chorion | 2.77e-13 | 7 |
somatic layer of lateral plate mesoderm | 7.42e-12 | 8 |
breast | 7.76e-10 | 10 |
chest | 5.48e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.01e-23 | 4 |
breast cancer | 1.01e-23 | 4 |
islet cell tumor | 1.18e-11 | 1 |
endocrine pancreas cancer | 1.18e-11 | 1 |
pancreatic endocrine carcinoma | 1.18e-11 | 1 |
endocrine gland cancer | 1.25e-07 | 6 |