FFCP PHASE1:Hg19::chr10:74653538..74653547,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=170392 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29953 | |||
|TSSclassifier=not | |||
|UniProt=Q8WWZ8,C9JXV7 | |||
|association_with_transcript=199bp_to_ENST00000334011,ENST00000415725,NM_152635,uc001jte.1,uc009xqs.1_5end | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_5_at_OIT3_5end | |||
|id=chr10:74653538..74653547,+ | |||
|ontology_enrichment_celltype=CL:0002262!1.44e-09!2;CL:1000398!1.44e-09!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.13e-11;11!UBERON:0009497;8.52e-10;13!UBERON:0003104;3.09e-09;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!5.15e-23!3;UBERON:0004854!5.15e-23!3;UBERON:0009034!5.15e-23!3;UBERON:0002095!5.15e-23!3;UBERON:0004782!5.15e-23!3;UBERON:0003281!5.15e-23!3;UBERON:0009664!5.15e-23!3;UBERON:0002296!5.15e-23!3;UBERON:0005602!5.15e-23!3;UBERON:0001179!5.15e-23!3;UBERON:0006293!5.15e-23!3;UBERON:0005057!6.66e-23!26;UBERON:0002107!1.85e-14!19;UBERON:0006925!1.85e-14!19;UBERON:0008836!1.85e-14!19;UBERON:0008835!1.56e-12!22;UBERON:0003894!1.56e-12!22;UBERON:0009854!5.30e-12!23;UBERON:0007499!4.57e-11!25;UBERON:0009497!4.57e-11!25;UBERON:0000015!4.57e-11!25;UBERON:0002423!4.57e-11!25;UBERON:0006235!4.57e-11!25;UBERON:0004161!4.57e-11!25;UBERON:0005172!9.43e-11!55;UBERON:0005173!9.43e-11!55;UBERON:0009856!1.19e-10!26;UBERON:0004177!1.94e-10!7;UBERON:0002417!1.13e-09!61;UBERON:0000916!1.13e-09!61;UBERON:0000945!3.01e-09!8;UBERON:0010039!3.01e-09!8;UBERON:0002365!5.59e-09!31;UBERON:0002330!5.59e-09!31;UBERON:0002368!5.56e-08!35;UBERON:0003497!8.62e-07!3;UBERON:0003909!8.62e-07!3;UBERON:0003835!8.62e-07!3;UBERON:0001281!8.62e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.02e-14;19!UBERON:0006925;3.02e-14;19!UBERON:0002423;5.28e-11;25!UBERON:0002106;8.99e-11;3!UBERON:0002365;7.90e-09;31!UBERON:0002330;7.90e-09;31!UBERON:0002368;3.43e-07;33!UBERON:0004177;5.70e-07;5!UBERON:0005057;5.70e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.02e-14,19;UBERON:0006925,3.02e-14,19;UBERON:0008836,3.02e-14,19;UBERON:0008835,2.09e-12,22;UBERON:0003894,2.09e-12,22;UBERON:0009854,6.73e-12,23;UBERON:0007499,5.28e-11,25;UBERON:0009497,5.28e-11,25;UBERON:0000015,5.28e-11,25;UBERON:0002423,5.28e-11,25;UBERON:0006235,5.28e-11,25;UBERON:0004161,5.28e-11,25;UBERON:0002106,8.99e-11,3;UBERON:0004854,8.99e-11,3;UBERON:0009034,8.99e-11,3;UBERON:0002095,8.99e-11,3;UBERON:0004782,8.99e-11,3;UBERON:0003281,8.99e-11,3;UBERON:0009664,8.99e-11,3;UBERON:0002296,8.99e-11,3;UBERON:0005602,8.99e-11,3;UBERON:0001179,8.99e-11,3;UBERON:0006293,8.99e-11,3;UBERON:0009856,1.31e-10,26;UBERON:0002365,5.24e-09,31;UBERON:0002330,5.24e-09,31;UBERON:0005172,6.15e-09,54;UBERON:0005173,6.15e-09,54;UBERON:0002417,4.37e-08,60;UBERON:0000916,4.37e-08,60;UBERON:0002368,4.72e-08,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,4.13552934676983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44773882019626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25001477666439,9.27548222385549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657887425858975,3.22289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@OIT3 | |||
}} |
Revision as of 03:28, 11 January 2014
Short description: | p5@OIT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_OIT3_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | 199bp_to_ENST00000334011, ENST00000415725, NM_152635, uc001jte.1, uc009xqs.1_5end |
EntrezGene: | OIT3 |
HGNC: | 29953 |
UniProt: | Q8WWZ8C9JXV7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 3.02e-14 | 19 |
digestive gland | 3.02e-14 | 19 |
liver bud | 3.02e-14 | 19 |
hepatic diverticulum | 2.09e-12 | 22 |
liver primordium | 2.09e-12 | 22 |
digestive tract diverticulum | 6.73e-12 | 23 |
epithelial sac | 5.28e-11 | 25 |
epithelium of foregut-midgut junction | 5.28e-11 | 25 |
anatomical boundary | 5.28e-11 | 25 |
hepatobiliary system | 5.28e-11 | 25 |
foregut-midgut junction | 5.28e-11 | 25 |
septum transversum | 5.28e-11 | 25 |
spleen | 8.99e-11 | 3 |
gastrointestinal system mesentery | 8.99e-11 | 3 |
stomach region | 8.99e-11 | 3 |
mesentery | 8.99e-11 | 3 |
gastrointestinal system serosa | 8.99e-11 | 3 |
mesentery of stomach | 8.99e-11 | 3 |
gut mesentery | 8.99e-11 | 3 |
dorsal mesentery | 8.99e-11 | 3 |
dorsal mesogastrium | 8.99e-11 | 3 |
peritoneal cavity | 8.99e-11 | 3 |
spleen primordium | 8.99e-11 | 3 |
sac | 1.31e-10 | 26 |
exocrine gland | 5.24e-09 | 31 |
exocrine system | 5.24e-09 | 31 |
abdomen element | 6.15e-09 | 54 |
abdominal segment element | 6.15e-09 | 54 |
abdominal segment of trunk | 4.37e-08 | 60 |
abdomen | 4.37e-08 | 60 |
endocrine gland | 4.72e-08 | 35 |