FFCP PHASE1:Hg19::chr10:105250670..105250675,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_at_chr10:105250670..105250675,+ | |||
|id=chr10:105250670..105250675,+ | |||
|ontology_enrichment_celltype=CL:0002541!2.92e-17!3;CL:0000767!7.14e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.81e-34;3!CL:0000349;1.51e-12;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.81e-34,3;CL:0000349,1.51e-12,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.58e-26;1 | |||
|ontology_enrichment_disease=DOID:1749!2.82e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:4556;1.54e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,1.54e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0000476!2.92e-17!3;UBERON:0000920!2.92e-17!3;UBERON:0003124!6.80e-13!7;UBERON:0000007!7.93e-12!2;UBERON:0005631!1.05e-09!14;UBERON:0000158!1.05e-09!14;UBERON:0002294!4.91e-07!7;UBERON:0001173!4.91e-07!7;UBERON:0004912!4.91e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.81e-34;3!UBERON:0000920;2.81e-34;3!UBERON:0005631;3.80e-23;10!UBERON:0000158;3.80e-23;10!UBERON:0000478;4.25e-17;24!UBERON:0001987;1.49e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.81e-34,3;UBERON:0003124,9.77e-33,7;UBERON:0005631,6.78e-29,14;UBERON:0000158,6.78e-29,14;UBERON:0000478,4.25e-17,24;UBERON:0001987,1.49e-07,4;UBERON:0004340,1.49e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36994326789761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91845782408015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01363417949149,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,48.1691751195198,0.549585560411174,59.6998949140871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,1.35291077473043,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0.19980960958213,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.49489756515279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924205329202706,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.91064876540519,6.12046354122208,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr10:105250670..105250675,+ | |||
}} |
Revision as of 04:47, 11 January 2014
Short description: | p@chr10:105250670..105250675, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:105250670..105250675, + |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.81e-34 | 3 |
extraembryonic cell | 1.51e-12 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.81e-34 | 3 |
chorion | 9.77e-33 | 7 |
extraembryonic membrane | 6.78e-29 | 14 |
membranous layer | 6.78e-29 | 14 |
extraembryonic structure | 4.25e-17 | 24 |
placenta | 1.49e-07 | 4 |
allantois | 1.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.54e-09 | 3 |