FFCP PHASE1:Hg19::chr11:1942642..1942649,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7140 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11950 | |||
|TSSclassifier=strong | |||
|UniProt=P45378 | |||
|association_with_transcript=53bp_to_ENST00000381558_5end | |||
|coexpression_cluster_id=C134 | |||
|description=CAGE_peak_13_at_TNNT3_5end | |||
|id=chr11:1942642..1942649,+ | |||
|ontology_enrichment_celltype=CL:0000188!1.73e-34!9;CL:0000594!2.51e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002575;1.54e-15;2!CL:0000632;1.04e-10;3!CL:0000669;1.96e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,1.54e-15,2;CL:0000632,1.09e-10,3;CL:0000669,1.96e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.21e-15;2!UBERON:0010056;2.21e-15;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!6.01e-15!63;UBERON:0001015!6.01e-15!63;UBERON:0000383!6.01e-15!63;UBERON:0001630!1.54e-14!2;UBERON:0005090!1.54e-14!2;UBERON:0000341!2.16e-14!2;UBERON:0001134!3.77e-13!61;UBERON:0002036!3.77e-13!61;UBERON:0003082!3.77e-13!61;UBERON:0004290!3.60e-11!70;UBERON:0001723!5.02e-10!3;UBERON:0001033!5.02e-10!3;UBERON:0010056!5.02e-10!3;UBERON:0000486!3.29e-09!82;UBERON:0000914!4.52e-09!83;UBERON:0002329!4.52e-09!83;UBERON:0003077!4.52e-09!83;UBERON:0003059!4.52e-09!83;UBERON:0007282!4.52e-09!83;UBERON:0009618!4.52e-09!83;UBERON:0007285!4.52e-09!83;UBERON:0002426!3.32e-08!1;UBERON:0003831!3.32e-08!1;UBERON:0003898!3.32e-08!1;UBERON:0004830!3.32e-08!1;UBERON:0001774!3.32e-08!1;UBERON:0003830!3.32e-08!1;UBERON:0005175!3.32e-08!1;UBERON:0003897!3.32e-08!1;UBERON:0001103!3.32e-08!1;UBERON:0010084!3.32e-08!1;UBERON:0005418!4.99e-08!1;UBERON:0001389!4.99e-08!1;UBERON:0000026!4.99e-08!1;UBERON:0008784!4.99e-08!1;UBERON:0006058!4.99e-08!1;UBERON:0003663!4.99e-08!1;UBERON:0001383!4.99e-08!1;UBERON:0004256!4.99e-08!1;UBERON:0002529!4.99e-08!1;UBERON:0004708!4.99e-08!1;UBERON:0002101!4.99e-08!1;UBERON:0004709!4.99e-08!1;UBERON:0003661!4.99e-08!1;UBERON:0002471!4.99e-08!1;UBERON:0004357!4.99e-08!1;UBERON:0009872!4.99e-08!1;UBERON:0004347!4.99e-08!1;UBERON:0005420!4.99e-08!1;UBERON:0005732!4.99e-08!1;UBERON:0006057!4.99e-08!1;UBERON:0000978!4.99e-08!1;UBERON:0002103!4.99e-08!1;UBERON:0001665!4.99e-08!1;UBERON:0003823!4.99e-08!1;UBERON:0000154!4.99e-08!1;UBERON:0005733!4.99e-08!1;UBERON:0005730!4.99e-08!1;UBERON:0002372!1.54e-07!1;UBERON:0001961!1.54e-07!1;UBERON:0001744!1.54e-07!1;UBERON:0001735!1.54e-07!1;UBERON:0005256!3.10e-07!143;UBERON:0003104!6.37e-07!238;UBERON:0009142!6.37e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;3.19e-38;3!UBERON:0001033;3.19e-38;3!UBERON:0002426;2.73e-29;1!UBERON:0003831;2.73e-29;1!UBERON:0003898;2.73e-29;1!UBERON:0004830;2.73e-29;1!UBERON:0003830;2.73e-29;1!UBERON:0005175;2.73e-29;1!UBERON:0001774;2.73e-29;1!UBERON:0001103;2.73e-29;1!UBERON:0001134;1.04e-16;16!UBERON:0002036;1.04e-16;16!UBERON:0005090;2.21e-15;2!UBERON:0001630;2.21e-15;2!UBERON:0002385;8.44e-09;31!UBERON:0001015;8.44e-09;31!UBERON:0000383;8.44e-09;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,3.86e-38,3;UBERON:0001033,3.86e-38,3;UBERON:0010056,3.86e-38,3;UBERON:0002426,1.78e-29,1;UBERON:0003831,1.78e-29,1;UBERON:0003898,1.78e-29,1;UBERON:0004830,1.78e-29,1;UBERON:0003830,1.78e-29,1;UBERON:0005175,1.78e-29,1;UBERON:0001774,1.78e-29,1;UBERON:0001103,1.78e-29,1;UBERON:0010084,1.78e-29,1;UBERON:0005090,1.78e-15,2;UBERON:0001630,1.78e-15,2;UBERON:0001042,3.15e-12,10;UBERON:0009145,3.15e-12,10;UBERON:0006562,3.30e-11,11;UBERON:0008814,3.24e-07,18;UBERON:0001557,6.97e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05886054286514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0.308097234229289,0.307007349452259,0.689182862422653,0,0.145016693914229,0.170453254832202,9.5264278142009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.513314034281235,10.4383298820438,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.714193294391221,0,0,0,0,0,1.52401723527873,1.36893320434112,0.134704106029175,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@TNNT3 | |||
}} |
Revision as of 06:05, 11 January 2014
Short description: | p13@TNNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TNNT3_5end |
Coexpression cluster: | C134_skeletal_diaphragm_tongue_throat_Skeletal_skin_penis |
Association with transcript: | 53bp_to_ENST00000381558_5end |
EntrezGene: | TNNT3 |
HGNC: | 11950 |
UniProt: | P45378 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 1.54e-15 | 2 |
hepatic stellate cell | 1.09e-10 | 3 |
pericyte cell | 1.96e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
tongue | 3.86e-38 | 3 |
gustatory system | 3.86e-38 | 3 |
future tongue | 3.86e-38 | 3 |
chest muscle | 1.78e-29 | 1 |
respiratory system muscle | 1.78e-29 | 1 |
skeletal muscle of trunk | 1.78e-29 | 1 |
respiratory system skeletal muscle | 1.78e-29 | 1 |
thoracic segment muscle | 1.78e-29 | 1 |
chest organ | 1.78e-29 | 1 |
muscle of trunk | 1.78e-29 | 1 |
diaphragm | 1.78e-29 | 1 |
future diaphragm | 1.78e-29 | 1 |
muscle structure | 1.78e-15 | 2 |
muscle organ | 1.78e-15 | 2 |
chordate pharynx | 3.15e-12 | 10 |
pharyngeal region of foregut | 3.15e-12 | 10 |
pharynx | 3.30e-11 | 11 |
pharyngeal arch system | 3.24e-07 | 18 |
upper respiratory tract | 6.97e-07 | 19 |