FFCP PHASE1:Hg19::chr11:9685724..9685742,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23075 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17070 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=42bp_to_ENST00000524817_5end | |||
|coexpression_cluster_id=C1651 | |||
|description=CAGE_peak_4_at_SWAP70_5end | |||
|id=chr11:9685724..9685742,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.32e-09!24;CL:0000048!5.96e-09!430;CL:0000034!1.02e-08!444;CL:0000723!1.31e-08!436;CL:0000945!1.86e-08!24;CL:0000826!1.86e-08!24;CL:0000236!9.34e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.59e-20;13!CL:0000945;1.35e-17;24!CL:0002544;2.38e-11;6!CL:1000306;6.01e-11;4!CL:0002547;6.01e-11;4!CL:1000413;1.16e-10;9!CL:0000453;2.25e-10;5!CL:0002139;1.37e-09;24!CL:0002138;1.39e-07;6!CL:0002545;9.76e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.98e-19,14;CL:0000945,4.73e-18,24;CL:0000826,4.73e-18,24;CL:0002544,3.37e-11,6;CL:1000306,7.21e-11,4;CL:0002547,7.21e-11,4;CL:1000413,1.55e-10,9;CL:0000453,2.14e-10,5;CL:0000048,8.88e-10,427;CL:0000034,1.23e-09,441;CL:0002139,1.81e-09,24;CL:0000723,1.90e-09,433;CL:0000134,1.98e-08,354;CL:0002320,4.89e-08,361;CL:0000542,1.38e-07,53;CL:0000051,1.38e-07,53;CL:0005020,1.68e-07,6;CL:0002138,1.68e-07,6;CL:0005022,1.68e-07,6;CL:0002545,7.87e-07,2;CL:0000738,9.11e-07,136 | |||
|ontology_enrichment_development_v019=CL:0005022;1.39e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.20e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.94e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000055!5.54e-13!69;UBERON:0001981!1.17e-11!60;UBERON:0007500!1.17e-11!60;UBERON:0004537!1.17e-11!60;UBERON:0006965!1.17e-11!60;UBERON:0001637!1.27e-11!42;UBERON:0003509!1.27e-11!42;UBERON:0004572!1.27e-11!42;UBERON:0002049!3.17e-11!79;UBERON:0007798!3.17e-11!79;UBERON:0004573!2.11e-09!33;UBERON:0004571!2.11e-09!33;UBERON:0000947!9.52e-09!21;UBERON:0010191!9.52e-09!21;UBERON:0004872!3.31e-08!84;UBERON:0002204!6.15e-08!167;UBERON:0004535!2.42e-07!110;UBERON:0001009!6.19e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0000947;7.42e-16;21!UBERON:0010191;7.42e-16;21!UBERON:0004573;1.29e-12;33!UBERON:0004571;1.29e-12;33!UBERON:0004797;6.01e-11;4!UBERON:0000415;6.01e-11;4!UBERON:0007240;6.01e-11;4!UBERON:0005742;6.01e-11;4!UBERON:0005734;6.01e-11;4!UBERON:0004664;6.01e-11;4!UBERON:0004663;6.01e-11;4!UBERON:0003915;1.16e-10;9!UBERON:0004700;1.16e-10;9!UBERON:0001917;1.16e-10;9!UBERON:0001637;1.18e-09;42!UBERON:0003509;1.18e-09;42!UBERON:0004572;1.18e-09;42!UBERON:0005800;9.76e-07;2!UBERON:0001515;9.76e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000947,9.82e-16,21;UBERON:0010191,9.82e-16,21;UBERON:0004573,2.19e-12,33;UBERON:0004571,2.19e-12,33;UBERON:0000415,7.21e-11,4;UBERON:0007240,7.21e-11,4;UBERON:0005742,7.21e-11,4;UBERON:0005734,7.21e-11,4;UBERON:0004664,7.21e-11,4;UBERON:0004663,7.21e-11,4;UBERON:0001637,1.20e-10,42;UBERON:0003509,1.20e-10,42;UBERON:0004572,1.20e-10,42;UBERON:0003915,1.55e-10,9;UBERON:0004700,1.55e-10,9;UBERON:0001917,1.55e-10,9;UBERON:0000055,2.27e-09,68;UBERON:0002049,1.31e-07,78;UBERON:0007798,1.31e-07,78;UBERON:0002384,1.67e-07,371;UBERON:0005800,7.87e-07,2;UBERON:0001515,7.87e-07,2 | |||
|phase1_expression=1.09007027562334,0.428201047781966,0.986680828671798,6.00439790118782,0,1.74467704820074,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,1.20538905604795,0.730310090387373,0,0,0,0,0,0.273748850145768,0,0.382067028739756,0.656804715599566,0.0787107813136792,0,0.383829398097213,0,0,0,0,1.47187681102573,6.39761546193397,0,0,0.200544447470142,0,0,0.32389366601898,0.257575567634187,0.872389432677388,1.13362783106643,0.727752183563449,0.464858073811369,0,0,0.28769239232215,0.768482119587302,0.236482229888585,0.344745680736619,0.645484683583826,0,0.941211697713023,1.63743690034707,1.57306439111559,0.306083892370903,1.28371610830437,0,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0.622822248995575,0.502497330513487,0,0,0,0.368277635987565,0.632924774881769,0,0,0.209658645508376,0,0.150176892841506,0.16072558669708,0.285012743741249,0.39783335439818,0.365328307529268,0,4.36910889009705,1.77901850772711,3.84057200309856,3.2031678962881,0.574752439954483,1.98313461835459,1.90810750907073,2.84606484554724,1.17447437874188,4.20500550937752,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.144846518960824,0,0,0.0945348171640679,0,0.263504357079378,0.130979075497713,0,0.370784442784429,0.97364218096405,0.348259474598534,0.26591592103773,0,0,0,1.19257444420023,0,1.38856200643038,1.13061588384802,2.09749718104953,0.825354125820202,0.835979866147242,1.29208379584664,3.5576626268671,1.33888245105868,0.805658634218294,0,0.732186172644509,1.47065232138347,3.24056779152704,0.535798369704479,0.673588117878509,0.450445921933289,0,0.949265659568129,0.183201743930407,0,0,0,0,1.2663051166458,1.32409180813219,1.72101972449288,1.06400514659507,0,0,0,0.622422070799533,0.134710672069688,0.490385709340376,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0,0,0,0.494533858557114,0,0,0,0,0.831192346452549,0,0.919463387397059,0.751190294532984,0.340296549480063,0.89694817844431,1.70845911054854,1.27159140695737,0.600182192168805,0.92747276314595,1.03056216018252,2.04728541964749,0.337552664482532,0.876933046450788,1.00973509697646,1.84099797284599,1.13152239773168,0.355009592516614,0.503760491138201,0.339121184620975,0.57978255948989,0.272746120590835,0.573609190778008,0,0,0.232387885739037,0,0.252320850875628,0.72995471815166,0,0,0,1.39310378409594,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0.171567810298526,0.439001141634502,0,0,0.185176890317059,0,0,0,0,0.234817388471643,1.15493158208859,0.462985512576611,0.951270761172991,0,0,0.984868024349589,0.468008530278475,0.594524649154913,0.93733833986777,0.503946384596579,0.283550194484773,0,0,0,0.492663237895943,1.84901711427775,0,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0.571652865261156,0.224262168690721,0,0.07333828582095,0.387815147273333,0,0,0,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,2.10833939483032,0.479249710983165,0,0,0.868687840005475,0.205476322550383,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.24538298343828,0,0,0.623912584592421,0.356857977594324,1.26161932027148,0,0.601892199455438,0,1.03473071292505,0,0,1.21637060255316,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0,1.48864684691266,0.61384789315225,1.12264037773229,1.53766979106841,0.511707249066704,0,1.48418066444991,0.154209693802656,0.710246901252508,0.246381468041427,0,0,0.120859449591622,0.40101294060657,0.0920809889358963,0.114814448164607,0.364182336013434,0.262248829918848,0,0.0770153371044148,0,0,0,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0.096670718292122,0.616194468458578,0,0,0.644521469209642,0,0.0852266274161009,0.178064071293475,0,0,0,0,0.464845549297286,1.25924938732256,0.6970372701606,0.924100740528266,0.532306030317022,1.73986598415015,1.11194531462352,0.858749320451947,0.372158369359667,0.316379424718726,0,0,0,0.318203247925937,0.78494864019923,0.539617372749944,0.54907405947211,0,0.808729926293264,0,0,0,0.974853958525138,1.05650146756755,0.545999645631943,0,0,0,0.66343897524122,0,0,0.655894752046633,0.405820753925408,0.30982349809975,0.563391205064483,0,0.196498082026242,0.7133421029625,0,0.211107635297664,1.97576935775941,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0.822724546172388,0,0.540031437238115,0,0.961416640147258,0,0.245040215981032,1.48642540100575,0,0,0,0.399158742865633,1.1490322207942,0.211673582723883,0.649243880549111,0.280797178113459,0.228234679033192,0.156679895773023,0,0.846458889008016,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.293016358543788,0.36408156524854,0,0,0.47748896947538,0,0,0,0.281338832821026,0.111308705022906,0,0,0.796991953004279,1.93398740871803,0,0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| |||
|short_description=p4@SWAP70 | |||
}} |
Revision as of 06:32, 11 January 2014
Short description: | p4@SWAP70 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SWAP70_5end |
Coexpression cluster: | C1651_migratory_Burkitt_lymphoma_CD19_immature_epithelioid_Adipocyte |
Association with transcript: | 42bp_to_ENST00000524817_5end |
EntrezGene: | SWAP70 |
HGNC: | 17070 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.98e-19 | 14 |
lymphocyte of B lineage | 4.73e-18 | 24 |
pro-B cell | 4.73e-18 | 24 |
aortic endothelial cell | 3.37e-11 | 6 |
fibroblast of tunica adventitia of artery | 7.21e-11 | 4 |
fibroblast of the aortic adventitia | 7.21e-11 | 4 |
endothelial cell of artery | 1.55e-10 | 9 |
Langerhans cell | 2.14e-10 | 5 |
multi fate stem cell | 8.88e-10 | 427 |
stem cell | 1.23e-09 | 441 |
endothelial cell of vascular tree | 1.81e-09 | 24 |
somatic stem cell | 1.90e-09 | 433 |
mesenchymal cell | 1.98e-08 | 354 |
connective tissue cell | 4.89e-08 | 361 |
lymphocyte | 1.38e-07 | 53 |
common lymphoid progenitor | 1.38e-07 | 53 |
lymphangioblast | 1.68e-07 | 6 |
endothelial cell of lymphatic vessel | 1.68e-07 | 6 |
vascular lymphangioblast | 1.68e-07 | 6 |
thoracic aorta endothelial cell | 7.87e-07 | 2 |
leukocyte | 9.11e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
aorta | 9.82e-16 | 21 |
aortic system | 9.82e-16 | 21 |
systemic artery | 2.19e-12 | 33 |
systemic arterial system | 2.19e-12 | 33 |
artery wall | 7.21e-11 | 4 |
tunica adventitia of artery | 7.21e-11 | 4 |
adventitia | 7.21e-11 | 4 |
tunica adventitia of blood vessel | 7.21e-11 | 4 |
aorta tunica adventitia | 7.21e-11 | 4 |
aorta wall | 7.21e-11 | 4 |
artery | 1.20e-10 | 42 |
arterial blood vessel | 1.20e-10 | 42 |
arterial system | 1.20e-10 | 42 |
endothelial tube | 1.55e-10 | 9 |
arterial system endothelium | 1.55e-10 | 9 |
endothelium of artery | 1.55e-10 | 9 |
vessel | 2.27e-09 | 68 |
vasculature | 1.31e-07 | 78 |
vascular system | 1.31e-07 | 78 |
connective tissue | 1.67e-07 | 371 |
segment of aorta | 7.87e-07 | 2 |
thoracic aorta | 7.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.94e-07 | 10 |