FFCP PHASE1:Hg19::chr11:111224162..111224190,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C442 | |||
|description=CAGE_peak_at_chr11:111224162..111224190,- | |||
|id=chr11:111224162..111224190,- | |||
|ontology_enrichment_celltype=CL:0000945!3.33e-83!24;CL:0000826!3.33e-83!24;CL:0000236!3.01e-39!14;CL:0000542!1.55e-38!53;CL:0000051!1.55e-38!53;CL:0000838!1.16e-35!52;CL:0002087!1.41e-15!119;CL:0000817!4.76e-15!3;CL:0002031!2.93e-13!124;CL:0000738!1.84e-12!140;CL:0000785!8.55e-11!2;CL:0000955!8.55e-11!2;CL:0000818!8.55e-11!2;CL:0000954!8.55e-11!2;CL:0000816!8.55e-11!2;CL:0002032!8.52e-10!165;CL:0000837!8.52e-10!165;CL:0000037!3.43e-09!172;CL:0000566!3.43e-09!172;CL:0000988!2.08e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.50e-70;24!CL:0000236;1.81e-27;13!CL:0000542;3.49e-20;53!CL:0000785;5.56e-16;1!CL:0000819;5.56e-16;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.28e-70,24;CL:0000826,4.28e-70,24;CL:0000838,7.12e-32,52;CL:0000542,2.97e-31,53;CL:0000051,2.97e-31,53;CL:0000236,1.46e-25,14;CL:0000819,5.56e-16,1;CL:0002087,1.07e-13,115;CL:0002031,4.42e-13,120;CL:0000738,2.05e-11,136;CL:0002032,1.83e-09,161;CL:0000837,1.83e-09,161;CL:0000037,5.09e-09,168;CL:0000785,1.20e-08,2;CL:0000955,1.20e-08,2;CL:0000818,1.20e-08,2;CL:0000954,1.20e-08,2;CL:0000816,1.20e-08,2;CL:0000988,1.69e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000051;3.49e-20;53!UBERON:0001045;2.06e-15;1!CL:0000954;1.20e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!3.45e-17!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.15e-50;10!DOID:0060073;5.56e-16;1!DOID:8675;5.56e-16;1!DOID:630;8.63e-16;1!DOID:0050177;8.63e-16;1!DOID:0050427;8.63e-16;1!DOID:4960;2.06e-15;1!DOID:0070004;2.06e-15;1!DOID:2355;2.06e-15;1!DOID:74;2.31e-08;2!DOID:2531;1.73e-07;51!DOID:0060083;1.73e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.77e-50,10;DOID:0060073,5.56e-16,1;DOID:8675,5.56e-16,1;DOID:630,9.99e-16,1;DOID:0050177,9.99e-16,1;DOID:0050427,9.99e-16,1;DOID:4960,2.06e-15,1;DOID:0070004,2.06e-15,1;DOID:2355,3.66e-15,1;DOID:2531,4.07e-13,51;DOID:0060083,4.07e-13,51;DOID:74,3.08e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002106!3.05e-14!3;UBERON:0004854!3.05e-14!3;UBERON:0009034!3.05e-14!3;UBERON:0002095!3.05e-14!3;UBERON:0004782!3.05e-14!3;UBERON:0003281!3.05e-14!3;UBERON:0009664!3.05e-14!3;UBERON:0002296!3.05e-14!3;UBERON:0005602!3.05e-14!3;UBERON:0001179!3.05e-14!3;UBERON:0006293!3.05e-14!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;2.06e-15;1!UBERON:0001153;2.06e-15;1!UBERON:0009854;2.06e-15;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.34e-15,1;UBERON:0001153,1.34e-15,1;UBERON:0001045,1.34e-15,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,0.57470412614962,0.787107813136792,0,0,0,0,0,0,1.85921281392724,1.13735385989937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,1.09227722252426,0.889509253863555,2.98711155796555,0.800791974072025,2.29900975981793,1.98313461835459,0,0.569212969109448,0.587237189370939,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.929015875628594,0.577076851905779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0,0,0.984678443688556,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,4.56136973039165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,1.01607998478941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7785046870815,3.41019275466509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54993481694734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.469919589899268,0.0644578879735772,1.49911733887393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0.201273793591026,2.24397944612263 | |||
|short_description=p@chr11:111224162..111224190,- | |||
}} |
Revision as of 10:15, 11 January 2014
Short description: | p@chr11:111224162..111224190, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:111224162..111224190, - |
Coexpression cluster: | C442_diffuse_xeroderma_lymphoma_Burkitt_plasma_b_lymphangiectasia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.28e-70 | 24 |
pro-B cell | 4.28e-70 | 24 |
lymphoid lineage restricted progenitor cell | 7.12e-32 | 52 |
lymphocyte | 2.97e-31 | 53 |
common lymphoid progenitor | 2.97e-31 | 53 |
B cell | 1.46e-25 | 14 |
B-1 B cell | 5.56e-16 | 1 |
nongranular leukocyte | 1.07e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 4.42e-13 | 120 |
leukocyte | 2.05e-11 | 136 |
hematopoietic oligopotent progenitor cell | 1.83e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.83e-09 | 161 |
hematopoietic stem cell | 5.09e-09 | 168 |
mature B cell | 1.20e-08 | 2 |
pre-B-II cell | 1.20e-08 | 2 |
transitional stage B cell | 1.20e-08 | 2 |
small pre-B-II cell | 1.20e-08 | 2 |
immature B cell | 1.20e-08 | 2 |
hematopoietic cell | 1.69e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 1.34e-15 | 1 |
caecum | 1.34e-15 | 1 |
midgut | 1.34e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.77e-50 | 10 |
lymphatic system cancer | 5.56e-16 | 1 |
lymphosarcoma | 5.56e-16 | 1 |
genetic disease | 9.99e-16 | 1 |
monogenic disease | 9.99e-16 | 1 |
xeroderma pigmentosum | 9.99e-16 | 1 |
bone marrow cancer | 2.06e-15 | 1 |
myeloma | 2.06e-15 | 1 |
anemia | 3.66e-15 | 1 |
hematologic cancer | 4.07e-13 | 51 |
immune system cancer | 4.07e-13 | 51 |
hematopoietic system disease | 3.08e-08 | 2 |