FFCP PHASE1:Hg19::chr12:13061810..13061833,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9052 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9836 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-169bp_to_ENST00000540125_5end | |||
|coexpression_cluster_id=C814 | |||
|description=CAGE_peak_5_at_GPRC5A_5end | |||
|id=chr12:13061810..13061833,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.12e-24!254;CL:0000077!2.59e-09!19;CL:1000497!3.48e-07!18;CL:0002518!3.48e-07!18;CL:1000507!3.75e-07!12;CL:1000494!3.75e-07!12;CL:0002076!8.35e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000077;2.09e-16;19!CL:1000497;2.47e-08;17!CL:0002518;2.47e-08;17!CL:1000449;7.74e-07;15!CL:1000507;8.58e-07;10!CL:1000494;8.58e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,4.26e-16,19;CL:0000066,3.32e-14,253;CL:1000497,3.39e-08,17;CL:0002518,3.39e-08,17 | |||
|ontology_enrichment_development_v019=UBERON:0005795;4.42e-07;10 | |||
|ontology_enrichment_disease=DOID:305!8.61e-21!106;DOID:0050687!1.32e-18!143;DOID:14566!1.53e-12!239;DOID:162!4.85e-11!235;DOID:1749!1.07e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.33e-13;3!DOID:127;1.33e-13;3!DOID:0060072;2.58e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.08e-14,3;DOID:127,7.08e-14,3;DOID:0060072,1.62e-10,4;DOID:14566,1.34e-08,239;DOID:305,2.26e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.28e-16!169;UBERON:0000925!8.28e-16!169;UBERON:0006595!8.28e-16!169;UBERON:0001007!3.83e-14!155;UBERON:0001555!3.83e-14!155;UBERON:0007026!3.83e-14!155;UBERON:0004921!1.24e-12!129;UBERON:0004185!1.24e-12!129;UBERON:0006554!9.58e-12!44;UBERON:0003064!1.04e-11!37;UBERON:0000077!2.52e-11!130;UBERON:0003104!2.77e-11!238;UBERON:0009142!2.77e-11!238;UBERON:0001008!2.87e-11!45;UBERON:0008947!2.26e-10!38;UBERON:0003258!2.26e-10!38;UBERON:0005153!2.58e-10!37;UBERON:0000065!5.30e-10!53;UBERON:0002367!8.33e-10!11;UBERON:0010147!8.33e-10!11;UBERON:0009846!8.33e-10!11;UBERON:0003353!8.33e-10!11;UBERON:0004902!8.33e-10!11;UBERON:0003820!8.33e-10!11;UBERON:0009847!8.33e-10!11;UBERON:0005911!1.09e-09!82;UBERON:0000162!2.30e-09!14;UBERON:0001353!2.30e-09!14;UBERON:0000163!2.30e-09!14;UBERON:0006866!2.30e-09!14;UBERON:0000164!2.30e-09!14;UBERON:0000931!2.30e-09!14;UBERON:0001737!2.39e-09!9;UBERON:0003937!1.06e-08!12;UBERON:0005399!1.06e-08!12;UBERON:0004122!1.79e-08!15;UBERON:0001046!3.29e-08!19;UBERON:0005157!3.46e-08!51;UBERON:0003101!9.30e-08!22;UBERON:0000079!9.30e-08!22;UBERON:0000481!1.55e-07!347;UBERON:0001004!1.61e-07!72;UBERON:0009773!3.75e-07!12;UBERON:0001231!3.75e-07!12;UBERON:0004810!3.75e-07!12;UBERON:0005177!4.89e-07!107;UBERON:0000464!4.98e-07!104;UBERON:0000072!7.39e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.69e-07;9!UBERON:0001557;1.69e-07;9!UBERON:0006555;7.74e-07;15!UBERON:0000353;7.74e-07;15!UBERON:0004819;7.74e-07;15!UBERON:0001285;7.74e-07;15!UBERON:0007684;7.74e-07;15!UBERON:0004211;8.58e-07;10!UBERON:0009773;8.58e-07;10!UBERON:0001231;8.58e-07;10!UBERON:0004810;8.58e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.35e-07,9;UBERON:0006554,8.62e-07,47 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,1.72013755551056,9.76921635161399,0,0.263766978228454,0.37129905888014,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0.612167784741805,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0.50133791063589,0.289693037921647,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0.261958150995425,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0,0.300476117813194,0.113432183160021,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709840800239063,0.842923450390509,0.482022059766964,1.7647035637183,1.30727666455444,1.66089433377768,0.539325232640658,0.98110732562673,2.30848294167834,0,1.40241773803446,0,0,0,0,0,0,0.860919069801795,0.343135620597051,0,0,0,0,0,0,2.88662684050547,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0.300343057843917,0,0.112131084345361,0.87192013766656,0.1466765716419,0.129271715757778,0,0,0.26593811658487,2.08014873822732,0,0,0.266422179016099,0.285955987316295,0,0,0,0,0,0,0,1.19967589418468,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,2.20557117333613,0.920809889358963,0.68888668898764,1.27463817604702,0.393373244878272,0.902399225814824,1.30926073077505,0,1.46139224653261,0.422206515571503,0,0.510281115829547,0,0,0.270946437543853,0.501689773854853,1.01950509218015,3.3243040357149,0.447749509444357,0,0,0,1.64007322849853,0,0.309123034943167,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0.330569830721956,0.192190067365106,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0,0,0.744316738719335,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.353437207037059,0,0,0.421258456238981,0,0.487426979262569,0,0.409499734223957,0.848432591722276,0,1.65409603063837,0.66343897524122,0.438450885253763,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,0.422215270595328,0,0,0,0,0.670302275535787,0,0.282431402330337,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0,0.568272293612826,0.71623345421307,0.593929361665277,0.921482106297696,0,0,0,0,0,0.19924798825107,0,0,0.20453736500431,0,0,1.70749867179921,0.179021174675609,0,0.295930216910801,0,0,0,0,0,0,0,0,0.341380344856499,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0.325942115766024,0.638002319463839,0.366390373607449,1.5991043280559,0,0,0,0,0,0,0,0,0.210998064528027,0.652931232636591,0.424059214301822,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0.782658475728359,0.728341138602278,0,0,0,0,0.150323419414493,0,0,0.661983911750998,0.627865836814451,0,0,0,0.694238953340524,0.489961987071888,0.174118413160805,0,0,1.45134496933628,0.584714536689484,0.821154570532092,0,0,0,0.274083849293502,0,0,0.782205530939212,0.0801588202515337,0.213452994739353,0,1.72908500584927,0,0,0.720273989940749,0,0.471388069233591,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0.896436696664224,0.959575986597226,0,0,0,2.17199840701485,3.45688596480507,1.95952416065645,0,0.082092520749339,0.170388021785422,0.226624183040251,0,0,0,0,0.171086837884329,0,1.38823636338003,0.471612915298998,1.65695622138878,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,4.9405822136616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90402606084398,0.406870733204662,0,0.107410557042488,0,0.796191777397232,0,0,0,0,0.770479321629213,0.643324774124777,0.782982875895635,1.58694147858591,3.24131464053368,0.734210113519403,2.32815493405934,4.63202170741458,1.31570429747224,0.883445729729405,2.31496845925098,1.18259708457151,0,0,1.21543982470953,0,0,0,0,0,0.491545817507439,0.422624246717254,0,0,0,1.70254786070051,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.0981477185010256,0.353909170043221,0.917142992608395,0.924205329202706,0,0,0,0,0,0,0,5.2407013603231,1.47856086217045,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0,0,0,0,0,0,1.18193840883968,0.667388411352415,0.078493092850514,0,0.560544326627578,0,0.215927591218621,1.43325506366115,0,0,0.23248285073625,0,0.801711364730253,0,0,0,0,0.236664001461131,0,0,2.7492824225286,0,0,0,0.785201868921944,0.853425474875886,0,0,0,0,0,0,0,0,0,0,0.077174158107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| |||
|short_description=p5@GPRC5A | |||
}} |
Revision as of 12:20, 11 January 2014
Short description: | p5@GPRC5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GPRC5A_5end |
Coexpression cluster: | C814_Alveolar_mesothelioma_bile_Renal_papillotubular_papillary_serous |
Association with transcript: | -169bp_to_ENST00000540125_5end |
EntrezGene: | GPRC5A |
HGNC: | 9836 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 4.26e-16 | 19 |
epithelial cell | 3.32e-14 | 253 |
kidney cell | 3.39e-08 | 17 |
kidney epithelial cell | 3.39e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.35e-07 | 9 |
urinary system structure | 8.62e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.08e-14 | 3 |
leiomyoma | 7.08e-14 | 3 |
benign neoplasm | 1.62e-10 | 4 |
disease of cellular proliferation | 1.34e-08 | 239 |
carcinoma | 2.26e-07 | 106 |