FFCP PHASE1:Hg19::chr12:25056160..25056161,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=976 | |||
|TSSclassifier=strong | |||
|UniProt=F5H5E4,B7Z2M5,P54687 | |||
|association_with_transcript=-151bp_to_ENST00000539282,NM_001178093_5end | |||
|description=CAGE_peak_57_at_BCAT1_5end | |||
|id=chr12:25056160..25056161,- | |||
|ontology_enrichment_celltype=CL:0000039!9.22e-08!7;CL:0000586!9.22e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.65e-29;7!CL:0000586;3.65e-29;7!CL:0002615;8.69e-18;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.65e-29,7;CL:0000586,3.65e-29,7;CL:0002615,1.12e-17,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.54e-21;10!UBERON:0005564;8.54e-21;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;4.53e-10;22!DOID:2994;4.53e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.53e-10,22;DOID:2994,4.53e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000033!3.25e-12!123;UBERON:0000153!2.49e-11!129;UBERON:0007811!2.49e-11!129;UBERON:0005743!1.36e-10!86;UBERON:0000955!2.76e-10!69;UBERON:0006238!2.76e-10!69;UBERON:0000073!3.19e-10!94;UBERON:0001016!3.19e-10!94;UBERON:0001869!3.87e-10!32;UBERON:0001893!2.06e-09!34;UBERON:0002020!2.08e-09!34;UBERON:0003528!2.08e-09!34;UBERON:0001049!2.97e-09!57;UBERON:0005068!2.97e-09!57;UBERON:0006241!2.97e-09!57;UBERON:0007135!2.97e-09!57;UBERON:0001017!4.77e-09!82;UBERON:0002616!8.03e-09!59;UBERON:0002619!9.12e-09!22;UBERON:0003075!1.38e-08!86;UBERON:0007284!1.38e-08!86;UBERON:0000200!1.53e-08!6;UBERON:0003056!3.23e-08!61;UBERON:0002791!4.49e-08!33;UBERON:0002346!5.24e-08!90;UBERON:0004121!9.25e-08!169;UBERON:0001950!1.42e-07!20;UBERON:0000956!1.45e-07!25;UBERON:0000203!1.45e-07!25;UBERON:0000924!1.98e-07!173;UBERON:0006601!1.98e-07!173;UBERON:0002780!2.01e-07!41;UBERON:0001890!2.01e-07!41;UBERON:0006240!2.01e-07!41;UBERON:0003080!3.40e-07!42;UBERON:0000473!8.88e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.11e-25;8!UBERON:0003135;5.14e-19;11!UBERON:0000991;1.69e-10;21!UBERON:0003101;4.53e-10;22!UBERON:0000079;4.53e-10;22!UBERON:0003688;1.38e-09;6!UBERON:0002358;1.38e-09;6!UBERON:0003684;1.38e-09;6!UBERON:0001178;1.38e-09;6!UBERON:0002323;2.84e-09;45!UBERON:0000922;3.83e-07;49!UBERON:0004457;8.14e-07;9!UBERON:0000042;8.14e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.11e-25,8;UBERON:0003135,5.14e-19,11;UBERON:0002323,1.44e-10,46;UBERON:0000991,1.69e-10,21;UBERON:0009196,1.69e-10,21;UBERON:0009117,1.69e-10,21;UBERON:0005564,1.69e-10,21;UBERON:0004176,4.53e-10,22;UBERON:0003101,4.53e-10,22;UBERON:0000079,4.53e-10,22;UBERON:0004458,5.64e-10,49;UBERON:0003688,1.57e-09,6;UBERON:0002358,1.57e-09,6;UBERON:0003684,1.57e-09,6;UBERON:0001178,1.57e-09,6;UBERON:0003886,3.93e-09,54;UBERON:0002553,3.51e-08,61 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0.639337125799041,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0.795229689809303,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.3755727921195,0.573409195690071,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0.270150338473579,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.543757863814654,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,1.1218771271618,1.06886962106224,0.827054095813604,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p57@BCAT1 | |||
}} |
Revision as of 12:42, 11 January 2014
Short description: | p57@BCAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_57_at_BCAT1_5end |
Coexpression cluster: | NA |
Association with transcript: | -151bp_to_ENST00000539282, NM_001178093_5end |
EntrezGene: | BCAT1 |
HGNC: | 976 |
UniProt: | F5H5E4B7Z2M5P54687 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.65e-29 | 7 |
germ cell | 3.65e-29 | 7 |
adipocyte of omentum tissue | 1.12e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.11e-25 | 8 |
male reproductive organ | 5.14e-19 | 11 |
body cavity | 1.44e-10 | 46 |
gonad | 1.69e-10 | 21 |
indifferent external genitalia | 1.69e-10 | 21 |
indifferent gonad | 1.69e-10 | 21 |
gonad primordium | 1.69e-10 | 21 |
external genitalia | 4.53e-10 | 22 |
male organism | 4.53e-10 | 22 |
male reproductive system | 4.53e-10 | 22 |
body cavity or lining | 5.64e-10 | 49 |
omentum | 1.57e-09 | 6 |
peritoneum | 1.57e-09 | 6 |
abdominal cavity | 1.57e-09 | 6 |
visceral peritoneum | 1.57e-09 | 6 |
body cavity precursor | 3.93e-09 | 54 |
anatomical cavity | 3.51e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.53e-10 | 22 |
germ cell cancer | 4.53e-10 | 22 |