FFCP PHASE1:Hg19::chr12:31805091..31805134,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:31805091..31805134,+ | |||
|id=chr12:31805091..31805134,+ | |||
|ontology_enrichment_celltype=CL:0002582!1.11e-07!3;CL:0002178!1.65e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000333;9.55e-17;5!CL:0000039;2.98e-12;7!CL:0000586;2.98e-12;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.98e-12,7;CL:0000586,2.98e-12,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.36e-09;10!UBERON:0005564;7.36e-09;10 | |||
|ontology_enrichment_disease=DOID:3119!1.60e-15!14;DOID:169!3.45e-11!6;DOID:3095!2.16e-10!22;DOID:2994!2.16e-10!22;DOID:0050687!8.41e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.31e-22;22!DOID:2994;1.31e-22;22!DOID:169;3.97e-14;6!DOID:3193;3.34e-11;2!DOID:962;3.34e-11;2!DOID:171;7.36e-09;10!DOID:0060084;6.78e-08;3!DOID:1192;6.78e-08;3!DOID:127;6.78e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.38e-22,22;DOID:2994,1.38e-22,22;DOID:169,4.24e-14,6;DOID:3193,3.35e-11,2;DOID:962,3.35e-11,2;DOID:171,7.66e-09,10;DOID:0060084,5.93e-08,3;DOID:127,5.93e-08,3;DOID:1192,6.78e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000013!1.59e-13!5;UBERON:0002410!1.59e-13!5;UBERON:0000010!2.74e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;9.55e-17;5!UBERON:0002410;9.55e-17;5!UBERON:0003714;3.34e-11;2!UBERON:0000473;7.67e-11;8!UBERON:0000010;9.65e-10;8!UBERON:0003135;3.89e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.03e-16,5;UBERON:0002410,1.03e-16,5;UBERON:0003714,3.35e-11,2;UBERON:0000473,7.67e-11,8;UBERON:0000010,1.01e-09,8;UBERON:0003135,3.90e-08,11 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506328996723799,0.0974370051611986,0.252433774244115,0,0,0,0.201504196455281,0,0,0,0,0,0.132529768321485,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,2.46972101034231,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0.177561725313127,0.164254312027618,0.519254429183621,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69544237579135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0.36408156524854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.520679215005393,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0.19980960958213,0.288180834308212,0.229073192331831,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0.191915197319445,0,0,0.25426853765475,1.62899880526114,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.553394539744923,0,0,0,0,0,0.579684114443301,0.149254802886874,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736423801007363,0,0,1.02315497042921,0.431299245586727,0.314531883711793,0.764467467344097,0,0,0,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,0,0,0,0.790068058663633,0.464965701472501,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,1.19370465096821,0.237840181555137,0,0.549702583727146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0.655593431782173,4.68784453742317,1.01988829741982,0,1.8378979906969,0.50141507858475,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:31805091..31805134,+ | |||
}} |
Revision as of 12:53, 11 January 2014
Short description: | p@chr12:31805091..31805134, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:31805091..31805134, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.98e-12 | 7 |
germ cell | 2.98e-12 | 7 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.03e-16 | 5 |
autonomic nervous system | 1.03e-16 | 5 |
neural tissue | 3.35e-11 | 2 |
testis | 7.67e-11 | 8 |
peripheral nervous system | 1.01e-09 | 8 |
male reproductive organ | 3.90e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.38e-22 | 22 |
germ cell cancer | 1.38e-22 | 22 |
neuroendocrine tumor | 4.24e-14 | 6 |
peripheral nerve sheath neoplasm | 3.35e-11 | 2 |
neurofibroma | 3.35e-11 | 2 |
neuroectodermal tumor | 7.66e-09 | 10 |
cell type benign neoplasm | 5.93e-08 | 3 |
leiomyoma | 5.93e-08 | 3 |
peripheral nervous system neoplasm | 6.78e-08 | 3 |