FFCP PHASE1:Hg19::chr12:48164812..48164829,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=10411 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16629 | |||
|TSSclassifier=strong | |||
|UniProt=F8VRX1,E7EQC8 | |||
|association_with_transcript=0bp_to_ENST00000397089,ENST00000548919,ENST00000549151,uc009zks.2_5end | |||
|coexpression_cluster_id=C2207 | |||
|description=CAGE_peak_14_at_RAPGEF3_5end | |||
|id=chr12:48164812..48164829,- | |||
|ontology_enrichment_celltype=CL:0000575!1.25e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000575;1.37e-31;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,1.00e-31,2 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.38e-14;10!UBERON:0007687;2.38e-14;10 | |||
|ontology_enrichment_disease=DOID:171!3.90e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.64e-10!90;UBERON:0003075!6.42e-09!86;UBERON:0007284!6.42e-09!86;UBERON:0007023!6.20e-08!115;UBERON:0000924!1.37e-07!173;UBERON:0006601!1.37e-07!173;UBERON:0002308!1.38e-07!9;UBERON:0000125!1.38e-07!9;UBERON:0000073!1.41e-07!94;UBERON:0001016!1.41e-07!94;UBERON:0000007!1.60e-07!2;UBERON:0001017!1.80e-07!82;UBERON:0000369!5.70e-07!4;UBERON:0002435!5.70e-07!4;UBERON:0000204!5.70e-07!4;UBERON:0010082!5.70e-07!4;UBERON:0005743!6.11e-07!86;UBERON:0002360!7.47e-07!2;UBERON:0000094!7.47e-07!2;UBERON:0007645!7.47e-07!2;UBERON:0003056!9.49e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;4.04e-31;2!UBERON:0000964;2.44e-16;4!UBERON:0010409;2.44e-16;4!UBERON:0003296;4.18e-16;4!UBERON:0010133;4.18e-16;4!UBERON:0001894;1.29e-09;7!UBERON:0010313;4.39e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.46e-31,2;UBERON:0000964,2.09e-16,4;UBERON:0010409,2.09e-16,4;UBERON:0004348,2.09e-16,4;UBERON:0005427,2.09e-16,4;UBERON:0003296,3.87e-16,4;UBERON:0010133,3.87e-16,4;UBERON:0001894,1.24e-09,7;UBERON:0006222,1.24e-09,7;UBERON:0010313,4.13e-07,10;UBERON:0002342,4.13e-07,10;UBERON:0005062,4.13e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,1.82147644146271,4.07862887062872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,1.92495971052672,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,4.25497827182285,0.344743373241465,0,0.694499979733169,0,0.361789315876224,0,0,0,0.219385397153973,0.762569244632931,1.81250867562184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.252746318513952,1.05226393590145,0.207376382794494,0,0,0,0,0.853828638089378,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0.687219576995494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0.272406812223151,0,0,0,0,0,0,0,0.315222829196793,2.46536564234491,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0.415045904808692,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04397716786085,0,0,0,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.218419276384028,0,0.212574920101683,2.10690799240304,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,1.82089681270989,1.36597314810779,0,0,0,0,0,0,0,0,0.157115589916002,0.280272163313789,0,0.647782773655864,0,0,0,6.16079554451064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p14@RAPGEF3 | |||
}} |
Revision as of 13:11, 11 January 2014
Short description: | p14@RAPGEF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_14_at_RAPGEF3_5end |
Coexpression cluster: | C2207_rhabdomyosarcoma_Corneal_bronchogenic_kidney_cervical_neuroepithelioma_neuroectodermal |
Association with transcript: | 0bp_to_ENST00000397089, ENST00000548919, ENST00000549151, uc009zks.2_5end |
EntrezGene: | RAPGEF3 |
HGNC: | 16629 |
UniProt: | F8VRX1E7EQC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 1.00e-31 | 2 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 3.46e-31 | 2 |
cornea | 2.09e-16 | 4 |
eye surface | 2.09e-16 | 4 |
optic eminence | 2.09e-16 | 4 |
corneal primordium | 2.09e-16 | 4 |
gland of diencephalon | 3.87e-16 | 4 |
neuroendocrine gland | 3.87e-16 | 4 |
diencephalon | 1.24e-09 | 7 |
future diencephalon | 1.24e-09 | 7 |
neural crest-derived structure | 4.13e-07 | 10 |
neural crest | 4.13e-07 | 10 |
neural fold | 4.13e-07 | 10 |