FFCP PHASE1:Hg19::chr12:52430849..52430860,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3164 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7980 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-100bp_to_ENST00000546842_5end | |||
|description=CAGE_peak_23_at_NR4A1_5end | |||
|id=chr12:52430849..52430860,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.46e-10!42;CL:0000860!1.69e-09!45;CL:0000557!1.17e-08!71;CL:0000839!6.58e-08!70;CL:0000766!8.25e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0002537;3.16e-12;5!CL:0002593;1.44e-08;2!CL:0001014;2.31e-08;2!CL:0001016;2.31e-08;2!CL:0000860;2.83e-07;33!CL:0002057;2.83e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,3.35e-12,5;CL:0002593,1.61e-08,2;CL:0001014,2.00e-08,2;CL:0001016,2.00e-08,2;CL:0000557,2.72e-07,67 | |||
|ontology_enrichment_development_v019=UBERON:0005754;8.02e-16;1!UBERON:0007297;1.44e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.62e-11!115;UBERON:0000062!4.06e-07!511;UBERON:0002371!5.75e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;8.02e-16;1!UBERON:0006868;8.02e-16;1!UBERON:0000996;2.06e-15;1!UBERON:0002135;2.06e-15;1!UBERON:0000305;5.37e-09;7!UBERON:0002456;1.44e-08;2!UBERON:0002133;2.31e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,8.63e-16,1;UBERON:0006868,8.63e-16,1;UBERON:0002135,1.16e-15,1;UBERON:0000996,2.38e-15,1;UBERON:0000305,5.59e-09,7;UBERON:0002456,1.61e-08,2;UBERON:0002133,1.73e-08,2;UBERON:0004871,5.76e-08,8;UBERON:0003081,2.88e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.697287110717054,0.411167888021826,2.47765096716083,0.28769239232215,0.256160706529101,0,1.37898272294647,0.645484683583826,2.70852973188684,0,0,0,0.612167784741805,0.641858054152187,0.639337125799041,0,0.199463657621632,0,0,0,0.622822248995575,0.251248665256743,0,0.65156653411535,1.21079900526674,0,0.949387162322653,0,0,0,0,0,0,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.621984346622316,0.432359860250884,3.66103056936502,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11300293513511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,1.43246690842614,0,1.22864280839693,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0.508507300585533,0,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0.108647371922008,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0.296521128680622,0,0,0.337005664903385,0.802577647298789,0.234264445725339,0,0.978323094660449,0,0,0,0,0.126373159256976,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,0,0.717873024576814,0.199679000498991,0,0,0.268733889946905,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,1.5476039091159,0,0,0.0788057072991982,0.209818352539992,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.320362237703084,0.628817220398664,0.414239055347196,0,0,0,0,0,0.5013797880454,0.612691153526923,0.327872630709804,0.157054096250234,0,0,0,1.14681839138014,0.221858103073705,0.248385611765534,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0.381382095467167,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,0,0.879356221798103,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.235479278551542,0,0.280272163313789,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,2.11693525095465,0.68732060563215,0,0,0,0,0.121917924982269,0,0.307988420568741,0,0,0,0.198950775161368,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.515663103788617,0,0,0.352894871715692,0,0,0,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0.380095503034311,0,0,0,0,0.151557396436479,0.267964130156178,0.829169439458779,0.103432995861895,0,0.23806443146374,0,0,0,0.318235791390825,1.81905470062397,0.435433495793923,0,0,0.215166616178029,0,0,0,0,0,0,0,0,1.33151354837103,0,0 | |||
|short_description=p23@NR4A1 | |||
}} |
Revision as of 13:31, 11 January 2014
Short description: | p23@NR4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_NR4A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -100bp_to_ENST00000546842_5end |
EntrezGene: | NR4A1 |
HGNC: | 7980 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 3.35e-12 | 5 |
smooth muscle cell of the internal thoracic artery | 1.61e-08 | 2 |
CD1a-positive Langerhans cell | 2.00e-08 | 2 |
immature CD1a-positive Langerhans cell | 2.00e-08 | 2 |
granulocyte monocyte progenitor cell | 2.72e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 8.63e-16 | 1 |
seminal fluid secreting gland | 8.63e-16 | 1 |
mitral valve | 1.16e-15 | 1 |
vagina | 2.38e-15 | 1 |
amnion | 5.59e-09 | 7 |
internal thoracic artery | 1.61e-08 | 2 |
atrioventricular valve | 1.73e-08 | 2 |
somatic layer of lateral plate mesoderm | 5.76e-08 | 8 |
lateral plate mesoderm | 2.88e-07 | 203 |