FFCP PHASE1:Hg19::chr12:56710118..56710147,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10330 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13529 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y2B0 | |||
|association_with_transcript=0bp_to_ENST00000273308,NM_001190991,NM_014255,uc001sku.1,uc001skv.2_5end | |||
|description=CAGE_peak_5_at_CNPY2_5end | |||
|id=chr12:56710118..56710147,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.63e-13!57;UBERON:0005068!1.63e-13!57;UBERON:0006241!1.63e-13!57;UBERON:0007135!1.63e-13!57;UBERON:0001017!2.44e-13!82;UBERON:0005743!3.07e-13!86;UBERON:0002616!2.39e-12!59;UBERON:0000073!4.95e-12!94;UBERON:0001016!4.95e-12!94;UBERON:0002346!4.87e-11!90;UBERON:0003075!1.85e-10!86;UBERON:0007284!1.85e-10!86;UBERON:0000955!2.25e-10!69;UBERON:0006238!2.25e-10!69;UBERON:0003080!1.80e-09!42;UBERON:0002780!3.75e-09!41;UBERON:0001890!3.75e-09!41;UBERON:0006240!3.75e-09!41;UBERON:0003056!1.49e-08!61;UBERON:0002020!3.57e-08!34;UBERON:0003528!3.57e-08!34;UBERON:0001893!3.99e-08!34;UBERON:0007023!7.49e-08!115;UBERON:0002791!8.13e-08!33;UBERON:0001869!2.78e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;7.15e-07;53!UBERON:0002616;7.15e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.60e-13,56;UBERON:0005068,4.60e-13,56;UBERON:0006241,4.60e-13,56;UBERON:0007135,4.60e-13,56;UBERON:0001017,4.74e-13,81;UBERON:0001016,5.25e-12,89;UBERON:0000073,8.16e-12,53;UBERON:0002616,8.16e-12,53;UBERON:0002346,1.85e-10,86;UBERON:0003075,6.28e-10,82;UBERON:0007284,6.28e-10,82;UBERON:0000955,6.76e-10,68;UBERON:0006238,6.76e-10,68;UBERON:0002780,1.06e-08,41;UBERON:0001890,1.06e-08,41;UBERON:0003080,1.06e-08,41;UBERON:0006240,1.06e-08,41;UBERON:0010314,4.85e-08,132;UBERON:0003528,5.94e-08,34;UBERON:0002020,5.94e-08,34;UBERON:0001893,6.67e-08,34;UBERON:0002791,3.50e-07,32;UBERON:0003056,3.90e-07,61;UBERON:0004121,5.17e-07,171;UBERON:0000924,5.17e-07,171;UBERON:0006601,5.17e-07,171;UBERON:0001869,5.25e-07,32 | |||
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| |||
|short_description=p5@CNPY2 | |||
}} |
Revision as of 14:01, 11 January 2014
Short description: | p5@CNPY2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CNPY2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000273308, NM_001190991, NM_014255, uc001sku.1, uc001skv.2_5end |
EntrezGene: | CNPY2 |
HGNC: | 13529 |
UniProt: | Q9Y2B0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 4.60e-13 | 56 |
neural rod | 4.60e-13 | 56 |
future spinal cord | 4.60e-13 | 56 |
neural keel | 4.60e-13 | 56 |
central nervous system | 4.74e-13 | 81 |
nervous system | 5.25e-12 | 89 |
regional part of nervous system | 8.16e-12 | 53 |
regional part of brain | 8.16e-12 | 53 |
neurectoderm | 1.85e-10 | 86 |
neural plate | 6.28e-10 | 82 |
presumptive neural plate | 6.28e-10 | 82 |
brain | 6.76e-10 | 68 |
future brain | 6.76e-10 | 68 |
regional part of forebrain | 1.06e-08 | 41 |
forebrain | 1.06e-08 | 41 |
anterior neural tube | 1.06e-08 | 41 |
future forebrain | 1.06e-08 | 41 |
structure with developmental contribution from neural crest | 4.85e-08 | 132 |
brain grey matter | 5.94e-08 | 34 |
gray matter | 5.94e-08 | 34 |
telencephalon | 6.67e-08 | 34 |
regional part of telencephalon | 3.50e-07 | 32 |
pre-chordal neural plate | 3.90e-07 | 61 |
ectoderm-derived structure | 5.17e-07 | 171 |
ectoderm | 5.17e-07 | 171 |
presumptive ectoderm | 5.17e-07 | 171 |
cerebral hemisphere | 5.25e-07 | 32 |