FFCP PHASE1:Hg19::chr12:86268065..86268080,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4922 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8038 | |||
|TSSclassifier=not | |||
|UniProt=P30990,G3V1X6,Q6FH20 | |||
|association_with_transcript=0bp_to_ENST00000256010,ENST00000551529,NM_006183,uc001tag.2_5end | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_1_at_NTS_5end | |||
|id=chr12:86268065..86268080,+ | |||
|ontology_enrichment_celltype=CL:0000047!4.87e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.38e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.03e-08,8;CL:0002322,4.48e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.96e-20!115;UBERON:0001017!6.81e-13!82;UBERON:0005743!6.86e-13!86;UBERON:0000073!1.28e-12!94;UBERON:0001016!1.28e-12!94;UBERON:0003075!1.47e-12!86;UBERON:0007284!1.47e-12!86;UBERON:0002346!5.91e-12!90;UBERON:0001049!3.02e-11!57;UBERON:0005068!3.02e-11!57;UBERON:0006241!3.02e-11!57;UBERON:0007135!3.02e-11!57;UBERON:0002616!5.26e-08!59;UBERON:0004121!1.02e-07!169;UBERON:0000924!1.65e-07!173;UBERON:0006601!1.65e-07!173;UBERON:0002780!2.90e-07!41;UBERON:0001890!2.90e-07!41;UBERON:0006240!2.90e-07!41;UBERON:0000955!3.16e-07!69;UBERON:0006238!3.16e-07!69;UBERON:0003080!6.50e-07!42;UBERON:0003056!8.92e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.84e-13;49!UBERON:0005409;4.65e-07;22!UBERON:0000349;5.10e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.81e-11,114;UBERON:0001017,4.19e-09,81;UBERON:0001016,8.06e-09,89;UBERON:0011216,1.24e-08,223;UBERON:0001049,1.31e-07,56;UBERON:0005068,1.31e-07,56;UBERON:0006241,1.31e-07,56;UBERON:0007135,1.31e-07,56;UBERON:0000349,5.39e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.945348171640679,0.665188192387692,1.58102614247627,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0.300091096084402,0,0,0.18611685633159,18.7341728787806,0.0974370051611986,0,0,0,0,0,0,0,0,0,4.14710600840624,37.1083351300159,63.7904746353656,11.2990549966754,28.512256148946,29.1981887260664,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,2.95394953340702,0.441463099414651,6.76436411987125,0,0,0,0,0,0,0,1.44331342025273,1.85488647960123,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.243213326358,0,0,0,0,0.126995788584338,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,6.86055485400651,1.30139853857622,0.773288812777695,1.00509759200609,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.587403472388222,0,0,0,0,0,0,0,0,0,0,0.384417447767103,0,0,0,0,0,4.43486642474569,0,0.116210378459959,2.41718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.512900250232778,0.984043937099117,0,1.854738209659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0.202182481573316,0,0,0,6.33655073041339,0,0,0.141405431953713,56.5040583101214,2.75682671773062,0,0,0,0,0,0,0.281695602532241,0,0,0,27.316601933436,0,0.329294892959902,0.379473173765715,0,0.0962221127255121,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,21.5784623677496,0,0.980160863924127,0,0.144269212976445,1.77854608371035,0,0,0,2.96343015813436,0,0,0.228234679033192,0,0,12.1890080017154,0,0,0,0,0,0,0,0,39.2552705192292,46.7732116001307,28.3978462399782,0,0,0,0.146508179271894,2937.65278946872,0,0,0,0,0,15.9063623642608,3.37606599385231,0,0,41.3805799930867,5.97743964753209,1.38141957765574,0.503865495708552,0,0.492339221844278,0,0,0,0,1.67693789582787,0,0,0,0.649376687132959,3.99227596002388,0,0.0874599999961957,0,0.455173793141999,0,0,0.689486746482929,0.583209226766509,0,11.5146380155799,1.32656082487949,0,0.442317039724898,0.591095237907095,4.16832254592548,0,31.6491899512429,1.30815439456455,0.113942055847001,0,0,0.54323685961004,0.31900115973192,0,0,0,0,4.82013877510454,0,0,0.503464760927528,17.2675896779008,49.5882126418782,0,0,0.141353071433941,0.216388639742091,0.995261931078505,12.2071439014608,26.8853263770795,0.593042257361244,0,0.104421949505455,5.93129970229958,16.8541305932746,59.9716981056868,0,0,0.728341138602278,0,14.5188859258397,85.7003732565372,0.189559738885464,1.80388103297391,5.18440956986236,0,0.330991955875499,0.313932918407225,0,0.569219092059585,10.5392751489985,2.2562765983567,0,0,3.84398670132466,0,5.2248418896106,5.77405604980866,5.66596653667144,5.33439590686307,0.617792886840502,0.225980740780532,0,0,0.0633107959558787,0,0,1.92107695265417,0,0,245.910071968221,0,0.14405479798815,0.49701014226173,2.82832841540154,0.135904206073614,0.523014231561666,0,0,0,0.547621515567972,0,0,0,1.95497680890578,0.229160424011684,0,0.199679000498991,0,0.446342914883745,5.44186127142483,0,0,0,0,0.13480708770837,0.492137407573744,0,14.3141344165675,4.22230558945884,281.318009813784,83.8990563243126,105.937286197442,0.2249738915515,0,0.121499113316049,0,2.04894838977915,1.31136470337495,0,0,0,2.85878130549347,0,0,0.542999601753713,0.864221491201268,8.16468400273523,0,17.7319844818572,0.170388021785422,0,0.732761168390412,3.97520666736664,18.0996138906171,5.81823447667836,1263.98955828943,0,6.62081957919707,3.45849471219265,0,34.2354555050246,0,0,0,1.08803560673895,0,0,0,0.314108192500469,0,0,0,94.0391080931717,24.5153203896444,8.258821591204,0,0,0.303298235083296,0.285465333544967,0,0,0,0,0,0,0,0,7.11848977277229,2.51724075236616,0.453692771289717,56.7345782127149,0,0.63718706865481,0,3.88157392190648,0,0,0,0,0.380805212168795,0,0,3.54454838240212,20.4174854346537,0,0,0.686791410365586,3.03074539889327,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0.107824811396682,5.34704202310048,0.109209638192014,0,0,1.11542187833102,8.37967376959866,0,0,962.286039439135,0,0,2.376481328569,0,0,0.82046545696302,0.756215088665154,0.0691572524642179,0.322951291263702,0,0,1.41563668017288,0,0,0,0,0,1.50420656698514,0,0.781514011233092,0,0,0,0.405225507710368,0,0.206686796501184,0.19024743058172,40.4761358673482,0,3.96968942711435,0,0,0,0,16.3880713143891,12.5214205243214,0.0887023701626388,1.95897778844825,0,0.815636795721981,0.131545547125698,0,0.556157009460346,0.941917114206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| |||
|short_description=p1@NTS | |||
}} |
Revision as of 14:59, 11 January 2014
Short description: | p1@NTS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NTS_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | 0bp_to_ENST00000256010, ENST00000551529, NM_006183, uc001tag.2_5end |
EntrezGene: | NTS |
HGNC: | 8038 |
UniProt: | P30990G3V1X6Q6FH20 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.03e-08 | 8 |
embryonic stem cell | 4.48e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.81e-11 | 114 |
central nervous system | 4.19e-09 | 81 |
nervous system | 8.06e-09 | 89 |
organ system subdivision | 1.24e-08 | 223 |
neural tube | 1.31e-07 | 56 |
neural rod | 1.31e-07 | 56 |
future spinal cord | 1.31e-07 | 56 |
neural keel | 1.31e-07 | 56 |
limbic system | 5.39e-07 | 5 |