FFCP PHASE1:Hg19::chr12:121416489..121416503,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6927 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11621 | |||
|TSSclassifier=strong | |||
|UniProt=F5H3E7 | |||
|association_with_transcript=0bp_to_ENST00000545458_5end | |||
|coexpression_cluster_id=C3246 | |||
|description=CAGE_peak_4_at_HNF1A_5end | |||
|id=chr12:121416489..121416503,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.78e-15!12;CL:0000417!1.78e-15!12;CL:0000668!1.78e-15!12;CL:0000414!1.78e-15!12;CL:0000412!1.78e-15!12;CL:0000182!1.78e-15!12;CL:0000223!8.11e-11!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.05e-37;12!CL:0002535;2.72e-10;2!CL:0002231;2.79e-07;3!CL:0002178;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.77e-38,12;CL:0000223,1.59e-19,58;CL:0002535,3.58e-10,2;CL:0002178,2.47e-07,3;CL:0002231,2.97e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.22e-41;11!UBERON:0009497;7.91e-35;13!UBERON:0001041;3.26e-15;30!UBERON:0003104;3.59e-14;31!CL:0000223;3.72e-13;58 | |||
|ontology_enrichment_disease=DOID:305!9.56e-11!106;DOID:0050687!1.69e-08!143;DOID:7!1.85e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:7;2.91e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,9.75e-12,39;DOID:305,5.03e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0008835!1.23e-15!22;UBERON:0003894!1.23e-15!22;UBERON:0009854!6.40e-15!23;UBERON:0007499!1.16e-13!25;UBERON:0009497!1.16e-13!25;UBERON:0000015!1.16e-13!25;UBERON:0002423!1.16e-13!25;UBERON:0006235!1.16e-13!25;UBERON:0004161!1.16e-13!25;UBERON:0002107!1.32e-13!19;UBERON:0006925!1.32e-13!19;UBERON:0008836!1.32e-13!19;UBERON:0009856!4.20e-13!26;UBERON:0004921!3.21e-11!129;UBERON:0004185!3.21e-11!129;UBERON:0005057!8.47e-10!26;UBERON:0003929!1.13e-09!54;UBERON:0005172!2.68e-09!55;UBERON:0005173!2.68e-09!55;UBERON:0005409!5.01e-09!35;UBERON:0001007!7.75e-09!155;UBERON:0001555!7.75e-09!155;UBERON:0007026!7.75e-09!155;UBERON:0000160!9.31e-09!27;UBERON:0002417!3.02e-08!61;UBERON:0000916!3.02e-08!61;UBERON:0002365!3.96e-08!31;UBERON:0002330!3.96e-08!31;UBERON:0004119!7.39e-08!169;UBERON:0000925!7.39e-08!169;UBERON:0006595!7.39e-08!169;UBERON:0005911!2.78e-07!82;UBERON:0000949!3.36e-07!45;UBERON:0002368!3.90e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.47e-24;19!UBERON:0006925;6.47e-24;19!UBERON:0002423;3.18e-18;25!UBERON:0002365;3.50e-14;31!UBERON:0002330;3.50e-14;31!UBERON:0002368;9.75e-13;33!UBERON:0006955;2.72e-10;2!UBERON:0004801;2.72e-10;2!UBERON:0005409;1.08e-07;22!UBERON:0000949;1.39e-07;43!UBERON:0002530;2.63e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.18e-24,19;UBERON:0006925,6.18e-24,19;UBERON:0008836,6.18e-24,19;UBERON:0008835,1.06e-20,22;UBERON:0003894,1.06e-20,22;UBERON:0009854,8.25e-20,23;UBERON:0007499,3.07e-18,25;UBERON:0009497,3.07e-18,25;UBERON:0000015,3.07e-18,25;UBERON:0002423,3.07e-18,25;UBERON:0006235,3.07e-18,25;UBERON:0004161,3.07e-18,25;UBERON:0009856,1.52e-17,26;UBERON:0003929,3.84e-16,54;UBERON:0002365,9.71e-15,31;UBERON:0002330,9.71e-15,31;UBERON:0002368,4.55e-13,35;UBERON:0004921,9.32e-12,118;UBERON:0002530,6.42e-11,59;UBERON:0005911,1.59e-10,82;UBERON:0000949,3.50e-10,45;UBERON:0006955,3.58e-10,2;UBERON:0004801,3.58e-10,2;UBERON:0001007,1.82e-09,145;UBERON:0001555,1.82e-09,145;UBERON:0007026,1.82e-09,145;UBERON:0004119,1.61e-08,160;UBERON:0000925,1.61e-08,160;UBERON:0006595,1.61e-08,160;UBERON:0005172,1.72e-08,54;UBERON:0005173,1.72e-08,54;UBERON:0002417,1.21e-07,60;UBERON:0000916,1.21e-07,60;UBERON:0001041,2.34e-07,87;UBERON:0011216,2.76e-07,223;UBERON:0005409,6.83e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44367627920718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0077309914171,0,0,0,0,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.22206028986725,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87317542300338,0,0.857974989309823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,2.52106183383116,1.89556474276683,2.89835238572995,5.11822903876694,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0,0.874238242015829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359300808426348,0,0,0,0,0,0 | |||
|short_description=p4@HNF1A | |||
}} |
Revision as of 16:18, 11 January 2014
Short description: | p4@HNF1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HNF1A_5end |
Coexpression cluster: | C3246_hepatoma_hepatocellular_rhabdomyosarcoma_hepatoblastoma_liver_Prostate_Intestinal |
Association with transcript: | 0bp_to_ENST00000545458_5end |
EntrezGene: | HNF1A |
HGNC: | 11621 |
UniProt: | F5H3E7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.77e-38 | 12 |
endodermal cell | 1.59e-19 | 58 |
epithelial cell of cervix | 3.58e-10 | 2 |
epithelial cell of stomach | 2.47e-07 | 3 |
epithelial cell of prostate | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 9.75e-12 | 39 |
carcinoma | 5.03e-08 | 106 |