FFCP PHASE1:Hg19::chr13:98795557..98795577,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10160 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3591 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y4F1 | |||
|association_with_transcript=52bp_to_ENST00000319562_5end | |||
|description=CAGE_peak_3_at_FARP1_5end | |||
|id=chr13:98795557..98795577,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.80e-22!180;CL:0000220!4.65e-12!246;CL:0002321!6.60e-12!248;CL:0000057!1.54e-11!75;CL:0000222!1.18e-08!119;CL:1000497!9.93e-08!18;CL:0002518!9.93e-08!18;CL:1000449!1.51e-07!16;CL:0002620!5.57e-07!23;CL:0000183!7.02e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.57e-08;17!CL:0002518;1.57e-08;17!CL:1000449;1.87e-08;15!CL:0002620;3.10e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.77e-12,76;CL:0002321,2.49e-11,250;CL:1000497,1.47e-08,17;CL:0002518,1.47e-08,17;CL:0000222,1.63e-08,121;CL:1000449,1.95e-08,15;CL:0002620,4.93e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.52e-21!365;UBERON:0000481!1.69e-18!347;UBERON:0000119!3.63e-18!312;UBERON:0000483!1.46e-17!309;UBERON:0005256!1.56e-15!143;UBERON:0000477!1.46e-14!286;UBERON:0004111!1.07e-13!241;UBERON:0000468!1.83e-13!659;UBERON:0000025!2.44e-13!194;UBERON:0002100!6.33e-13!216;UBERON:0003104!1.39e-12!238;UBERON:0009142!1.39e-12!238;UBERON:0003914!4.63e-12!118;UBERON:0005172!1.31e-11!55;UBERON:0005173!1.31e-11!55;UBERON:0000467!2.24e-11!625;UBERON:0000480!4.19e-11!626;UBERON:0002417!2.19e-10!61;UBERON:0000916!2.19e-10!61;UBERON:0000490!7.04e-10!138;UBERON:0005177!5.74e-09!107;UBERON:0000080!2.81e-08!18;UBERON:0002120!2.81e-08!18;UBERON:0004875!2.81e-08!18;UBERON:0005721!2.81e-08!18;UBERON:0005754!2.81e-08!18;UBERON:0007297!2.81e-08!18;UBERON:0009569!2.83e-08!113;UBERON:0000922!5.31e-08!612;UBERON:0006554!5.66e-08!44;UBERON:0006555!6.62e-08!17;UBERON:0005103!6.62e-08!17;UBERON:0000083!6.62e-08!17;UBERON:0009201!6.62e-08!17;UBERON:0004819!6.62e-08!17;UBERON:0006553!6.62e-08!17;UBERON:0003074!6.62e-08!17;UBERON:0003060!6.62e-08!17;UBERON:0000353!7.70e-08!17;UBERON:0001008!9.10e-08!45;UBERON:0003064!9.64e-08!37;UBERON:0000058!1.02e-07!26;UBERON:0004876!1.15e-07!20;UBERON:0000466!1.20e-07!126;UBERON:0004211!1.51e-07!16;UBERON:0001285!1.51e-07!16;UBERON:0007684!1.51e-07!16;UBERON:0003220!1.51e-07!16;UBERON:0004208!1.51e-07!16;UBERON:0002050!1.70e-07!605;UBERON:0005423!1.70e-07!605;UBERON:0000064!2.04e-07!219;UBERON:0002107!2.25e-07!19;UBERON:0006925!2.25e-07!19;UBERON:0008836!2.25e-07!19;UBERON:0003887!2.42e-07!21;UBERON:0000923!3.24e-07!604;UBERON:0005291!3.24e-07!604;UBERON:0006598!3.24e-07!604;UBERON:0002532!3.24e-07!604;UBERON:0000489!4.08e-07!32;UBERON:0002113!4.76e-07!27;UBERON:0003918!4.76e-07!27;UBERON:0005095!4.76e-07!27;UBERON:0007687!4.76e-07!27;UBERON:0007499!6.23e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.87e-08;15!UBERON:0004819;1.87e-08;15!UBERON:0001285;1.87e-08;15!UBERON:0007684;1.87e-08;15!UBERON:0000353;4.43e-08;15!UBERON:0002107;2.55e-07;19!UBERON:0006925;2.55e-07;19!UBERON:0005172;2.68e-07;52!UBERON:0005173;2.68e-07;52!UBERON:0006554;3.59e-07;30!UBERON:0001008;3.59e-07;30!UBERON:0000489;9.30e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,4.10e-17,160;UBERON:0009142,4.10e-17,160;UBERON:0000119,3.69e-16,309;UBERON:0000483,1.38e-15,306;UBERON:0004111,2.73e-13,240;UBERON:0000025,1.18e-12,192;UBERON:0005256,4.39e-12,122;UBERON:0005172,5.00e-12,54;UBERON:0005173,5.00e-12,54;UBERON:0003914,6.15e-12,117;UBERON:0002100,7.70e-12,199;UBERON:0002417,9.71e-11,60;UBERON:0000916,9.71e-11,60;UBERON:0000490,2.61e-10,148;UBERON:0011216,5.22e-09,223;UBERON:0005177,5.29e-09,101;UBERON:0006555,8.65e-09,16;UBERON:0004819,8.65e-09,16;UBERON:0004211,1.95e-08,15;UBERON:0009773,1.95e-08,15;UBERON:0001231,1.95e-08,15;UBERON:0001285,1.95e-08,15;UBERON:0007684,1.95e-08,15;UBERON:0004208,1.95e-08,15;UBERON:0009569,3.37e-08,112;UBERON:0000353,4.26e-08,15;UBERON:0006554,1.06e-07,47;UBERON:0001008,1.64e-07,48;UBERON:0000489,1.73e-07,31;UBERON:0002113,1.82e-07,26;UBERON:0003918,1.82e-07,26;UBERON:0011143,1.82e-07,26;UBERON:0005095,1.82e-07,26;UBERON:0007687,1.82e-07,26;UBERON:0002107,1.97e-07,19;UBERON:0006925,1.97e-07,19;UBERON:0008836,1.97e-07,19;UBERON:0007503,2.37e-07,78;UBERON:0007499,8.61e-07,25 | |||
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| |||
|short_description=p3@FARP1 | |||
}} |
Revision as of 18:22, 11 January 2014
Short description: | p3@FARP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FARP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 52bp_to_ENST00000319562_5end |
EntrezGene: | FARP1 |
HGNC: | 3591 |
UniProt: | Q9Y4F1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.77e-12 | 76 |
embryonic cell | 2.49e-11 | 250 |
kidney cell | 1.47e-08 | 17 |
kidney epithelial cell | 1.47e-08 | 17 |
mesodermal cell | 1.63e-08 | 121 |
epithelial cell of nephron | 1.95e-08 | 15 |
skin fibroblast | 4.93e-07 | 23 |