FFCP PHASE1:Hg19::chr13:109248336..109248343,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23026 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29822 | |||
|TSSclassifier=weak | |||
|UniProt=Q9Y6X6,F8WBZ5 | |||
|association_with_transcript=-156bp_to_ENST00000356711,ENST00000397258,NM_015011,uc001vqt.1_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_7_at_MYO16_5end | |||
|id=chr13:109248336..109248343,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.97e-84;3!UBERON:0003057;1.97e-84;3!UBERON:0006215;1.04e-10;3!UBERON:0006601;6.23e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.26e-61!57;UBERON:0005068!4.26e-61!57;UBERON:0006241!4.26e-61!57;UBERON:0007135!4.26e-61!57;UBERON:0002616!3.84e-46!59;UBERON:0003075!1.80e-41!86;UBERON:0007284!1.80e-41!86;UBERON:0005743!6.36e-41!86;UBERON:0001017!3.96e-40!82;UBERON:0002346!2.39e-39!90;UBERON:0000955!4.74e-38!69;UBERON:0006238!4.74e-38!69;UBERON:0003076!5.33e-37!15;UBERON:0003057!5.33e-37!15;UBERON:0000073!1.71e-36!94;UBERON:0001016!1.71e-36!94;UBERON:0007023!4.00e-34!115;UBERON:0002780!6.60e-31!41;UBERON:0001890!6.60e-31!41;UBERON:0006240!6.60e-31!41;UBERON:0003080!4.32e-30!42;UBERON:0002020!1.53e-25!34;UBERON:0003528!1.53e-25!34;UBERON:0001893!2.10e-25!34;UBERON:0004733!1.64e-24!12;UBERON:0002028!1.64e-24!12;UBERON:0007277!1.64e-24!12;UBERON:0000033!1.93e-24!123;UBERON:0000153!5.10e-23!129;UBERON:0007811!5.10e-23!129;UBERON:0002791!9.24e-23!33;UBERON:0004732!1.59e-22!13;UBERON:0003056!4.97e-22!61;UBERON:0002619!2.28e-21!22;UBERON:0002298!5.25e-21!8;UBERON:0001869!5.52e-20!32;UBERON:0001950!1.73e-19!20;UBERON:0004121!4.66e-19!169;UBERON:0002680!1.00e-18!9;UBERON:0001895!1.00e-18!9;UBERON:0010092!1.00e-18!9;UBERON:0000956!1.19e-18!25;UBERON:0000203!1.19e-18!25;UBERON:0000924!1.82e-18!173;UBERON:0006601!1.82e-18!173;UBERON:0002240!1.38e-15!3;UBERON:0000988!6.94e-15!3;UBERON:0006331!8.36e-15!3;UBERON:0000025!1.61e-13!194;UBERON:0000200!6.53e-12!6;UBERON:0003296!8.96e-12!4;UBERON:0010133!8.96e-12!4;UBERON:0001905!4.35e-11!2;UBERON:0002757!4.35e-11!2;UBERON:0010134!4.35e-11!2;UBERON:0002784!4.35e-11!2;UBERON:0005408!4.35e-11!2;UBERON:0001899!4.35e-11!2;UBERON:0004111!1.46e-10!241;UBERON:0002148!1.74e-10!2;UBERON:0009662!1.74e-10!2;UBERON:0000064!6.26e-10!219;UBERON:0005174!1.58e-09!5;UBERON:0001137!1.58e-09!5;UBERON:0001872!7.06e-09!5;UBERON:0000477!1.14e-08!286;UBERON:0002308!2.44e-08!9;UBERON:0000125!2.44e-08!9;UBERON:0002037!7.49e-08!6;UBERON:0006215!7.49e-08!6;UBERON:0001896!1.90e-07!3;UBERON:0005290!1.90e-07!3;UBERON:0010096!1.90e-07!3;UBERON:0001894!6.81e-07!7;UBERON:0006222!6.81e-07!7;UBERON:0000483!7.89e-07!309;UBERON:0002771!9.07e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;1.97e-84;3!UBERON:0005174;1.97e-84;3!UBERON:0001137;1.97e-84;3!UBERON:0001905;3.10e-57;2!UBERON:0002757;3.10e-57;2!UBERON:0010134;3.10e-57;2!UBERON:0005408;3.10e-57;2!UBERON:0001899;3.10e-57;2!UBERON:0003296;2.94e-29;4!UBERON:0010133;2.94e-29;4!UBERON:0002784;2.94e-29;4!UBERON:0001894;3.28e-17;7!UBERON:0000489;1.74e-09;29!UBERON:0001016;3.84e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,4.03e-84,3;UBERON:0005174,4.03e-84,3;UBERON:0001137,4.03e-84,3;UBERON:0001905,2.02e-57,2;UBERON:0002757,2.02e-57,2;UBERON:0010134,2.02e-57,2;UBERON:0005408,2.02e-57,2;UBERON:0001899,2.02e-57,2;UBERON:0003076,2.24e-30,15;UBERON:0003057,2.24e-30,15;UBERON:0003296,2.37e-29,4;UBERON:0010133,2.37e-29,4;UBERON:0002784,2.37e-29,4;UBERON:0001049,4.52e-18,56;UBERON:0005068,4.52e-18,56;UBERON:0006241,4.52e-18,56;UBERON:0007135,4.52e-18,56;UBERON:0001894,2.90e-17,7;UBERON:0006222,2.90e-17,7;UBERON:0001017,1.68e-12,81;UBERON:0003075,1.68e-12,82;UBERON:0007284,1.68e-12,82;UBERON:0002346,6.15e-12,86;UBERON:0001016,2.66e-11,89;UBERON:0010371,6.30e-10,104;UBERON:0000489,6.88e-09,31;UBERON:0010314,7.20e-08,132 | |||
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|short_description=p7@MYO16 | |||
}} |
Revision as of 18:37, 11 January 2014
Short description: | p7@MYO16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MYO16_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -156bp_to_ENST00000356711, ENST00000397258, NM_015011, uc001vqt.1_5end |
EntrezGene: | MYO16 |
HGNC: | 29822 |
UniProt: | Q9Y6X6F8WBZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spinal cord | 4.03e-84 | 3 |
dorsal region element | 4.03e-84 | 3 |
dorsum | 4.03e-84 | 3 |
pineal body | 2.02e-57 | 2 |
regional part of epithalamus | 2.02e-57 | 2 |
secretory circumventricular organ | 2.02e-57 | 2 |
circumventricular organ | 2.02e-57 | 2 |
epithalamus | 2.02e-57 | 2 |
posterior neural tube | 2.24e-30 | 15 |
chordal neural plate | 2.24e-30 | 15 |
gland of diencephalon | 2.37e-29 | 4 |
neuroendocrine gland | 2.37e-29 | 4 |
regional part of diencephalon | 2.37e-29 | 4 |
neural tube | 4.52e-18 | 56 |
neural rod | 4.52e-18 | 56 |
future spinal cord | 4.52e-18 | 56 |
neural keel | 4.52e-18 | 56 |
diencephalon | 2.90e-17 | 7 |
future diencephalon | 2.90e-17 | 7 |
central nervous system | 1.68e-12 | 81 |
neural plate | 1.68e-12 | 82 |
presumptive neural plate | 1.68e-12 | 82 |
neurectoderm | 6.15e-12 | 86 |
nervous system | 2.66e-11 | 89 |
ecto-epithelium | 6.30e-10 | 104 |
cavitated compound organ | 6.88e-09 | 31 |
structure with developmental contribution from neural crest | 7.20e-08 | 132 |