FFCP PHASE1:Hg19::chr16:2255710..2255789,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64223 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24825 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BVC4 | |||
|association_with_transcript=0bp_to_ENST00000397124,NM_001199174,uc002cpf.2,uc002cpg.2,uc002cph.2,uc010uvy.1_5end | |||
|description=CAGE_peak_2_at_MLST8_5end | |||
|id=chr16:2255710..2255789,+ | |||
|ontology_enrichment_celltype=CL:0002321!4.27e-18!248;CL:0000220!2.57e-17!246;CL:0000066!1.70e-13!254;CL:0000055!2.32e-10!180;CL:0000221!2.93e-09!71;CL:0000333!5.40e-09!41;CL:0000133!2.26e-08!59;CL:0000222!4.25e-07!119;CL:0000147!9.76e-07!14;CL:0000548!9.90e-07!679;CL:0000004!9.90e-07!679;CL:0000255!9.90e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000147;8.39e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.91e-18,250;CL:0000066,2.14e-13,253;CL:0000221,4.83e-09,72;CL:0000333,5.40e-09,41;CL:0000133,2.26e-08,59;CL:0000222,2.37e-07,121;CL:0000147,9.76e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.04e-10!239;DOID:162!3.07e-10!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.04e-10,239;DOID:162,3.07e-10,235 | |||
|ontology_enrichment_uberon=UBERON:0000483!8.27e-12!309;UBERON:0000119!1.44e-11!312;UBERON:0000481!2.60e-09!347;UBERON:0000475!2.75e-09!365;UBERON:0000064!1.07e-08!219 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000483,6.18e-11,306;UBERON:0000119,1.05e-10,309 | |||
|phase1_expression=14.1709135831034,19.2690471501885,10.5715803071978,12.0087958023756,19.2193270603734,18.3191090061077,65.8579683237607,24.6370750636464,49.8864549861692,33.1740814277037,78.8515319808843,8.08233076881637,14.2434168243365,12.0053362371245,16.5698687863958,20.1697543935533,10.2458069764076,13.1455816269727,14.1500511649247,25.1166958476647,30.1921023041494,35.4203835270239,16.6016872536013,19.9836660606411,22.2210472082801,8.9403684725103,10.2625736812432,9.05173985107311,1.18009283054671,2.30297638858328,4.4896675761662,48.7293248973831,76.5063033696755,49.1772833521828,15.41597291548,15.7807848061038,11.7440175733939,3.87796785972314,4.01088894940283,2.38711957787437,11.867520134716,11.6601719766833,13.6515050846119,2.18097358169347,3.77875943688809,1.69808842831471,1.39457422143411,3.70051099219643,4.02618282163635,2.01384674625505,5.12321413058201,1.89185783910868,2.41321976515633,2.5819387343353,4.06279459783025,2.07066573496865,3.0019676506363,0.898893937780338,2.44867113896722,3.85114832491312,1.27867425159808,2.30895910130701,3.59034583718937,2.98357325372886,2.32167390902867,0,0,1.7587406567972,3.12889751052121,1.3031330682307,1.21079900526674,1.84138817993782,0.316462387440884,3.80259515361495,1.91343869968539,3.56419697364239,5.72876018847125,2.85336096398862,6.10757229448904,1.71007646244749,0.99458338599545,1.27864907635244,0,3.82297027883492,2.66852776159066,2.56038133539904,2.80277190925209,2.87376219977242,2.64417949113945,1.90810750907073,0.569212969109448,1.76171156811282,3.05818582500183,3.96513985737078,3.36305137788922,11.8522838148785,1.180258620683,2.35806457649499,4.11202997999018,4.01247588937627,1.30368906653436,1.89379122293893,3.89653456815823,4.56782873229212,2.06224135232386,0.886135578334485,0.541607727530031,3.0741916734162,4.29195846947598,4.76869923350661,5.52700035571697,3.76744011455568,2.96573126324121,1.33770414044857,2.09071047609954,3.28597093822942,0.766440987203842,1.71813722741315,1.51811815211702,2.54852331459277,1.95325036156926,2.85135613334512,4.21610333417764,1.4078527226986,2.49861453104692,3.07810427657222,1.64225599384209,2.01606743224732,2.40696176205157,2.02754165435919,4.87613732627923,12.0726154746655,16.4942704778154,16.9876401620746,17.0454889616202,14.774344934004,15.905718941022,23.8451086448292,14.4638270261024,14.1906814376041,17.391287567239,10.3473469643193,56.8300649736366,43.3817798057782,7.14004266040303,8.35822739036483,8.11043559165077,1.19245312152671,0.571994910780128,0.74291500265913,21.6651024029709,28.3877416385021,16.6627440771645,31.6572447477445,21.8139706829151,27.2366861520667,22.3624614194387,17.313922864345,13.8748842447817,14.0582657361161,9.26507429351038,16.7259863258073,15.3759096255347,15.4418493745265,18.6332648012805,14.1986567971687,20.6567022816076,18.9187287211981,33.7296602424943,31.3257667657483,25.4650424063266,0,0,48.8425338399638,12.424298792383,9.49728837484348,4.10468460520978,4.01571269048339,13.4773985235376,18.5023608046961,17.0798393167528,29.6001058100592,14.9381296991888,15.3570166159444,12.0961808303959,12.1085942115945,12.67587033856,34.4452504795681,33.088968144014,42.7853866158337,25.7051730549098,28.8888866663662,20.2341180460164,16.9945476109721,11.6367877615289,15.5999582985945,22.4216945151411,19.0080457165129,15.3305496152705,20.9337113245746,35.9309070908119,16.3286030535444,20.6445557788741,10.528436388399,9.2185300384976,9.80760946556863,18.0285670687916,10.549193033882,3.94657198515496,11.7456563850212,12.080118366095,5.40163972951924,9.2747276314595,2.57640540045629,11.5392450925586,3.20675031258406,12.4719366606334,4.54380793639406,15.0041334786948,13.739914829599,2.4850671476163,8.7654325458047,8.98671139245584,13.5282597214308,10.3643525824517,8.31733326628111,44.8863238556911,35.783037446801,33.3476616035518,32.2385881097802,43.1468654997325,31.3880528805214,17.2094485562798,12.2215778256648,13.8134921352481,10.6804623447355,11.5500717067134,16.7995656056578,17.0270536978883,22.1730147492803,16.5440959098591,16.1230788628381,22.066167577332,22.7864910790678,22.1730255591641,19.6221050042659,21.4065081841148,26.6459370226547,13.9935163852676,20.5812195939759,10.1404027857465,7.86261773342101,6.49868897349544,8.82926198829301,13.6517166782856,16.1273741680614,22.1695576525424,49.4567714333526,24.7301272132612,22.5915806186812,27.042089340757,29.1181739878282,14.4331342025273,28.8666708387941,15.8501737218359,11.9824151641691,11.5746378144153,7.03940363268014,1.58040879591855,4.29243081047436,8.8638122191463,10.9982004615442,14.1199604174292,8.43604505880993,7.72717789714754,7.79763034833126,12.0008420421817,15.6942326797539,28.7537009373908,0.492663237895943,5.45900290882001,1.4512968087854,1.44119953416961,1.13618190083742,29.2090313743978,84.0374536228211,83.2243875191334,66.718253948855,23.2390133509511,23.4267585118256,43.1597913272173,13.4557301214433,14.3866822714982,8.72725601269305,28.4397774667111,200.287609677054,15.215449546008,12.4990914794889,16.6411899058186,2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| |||
|short_description=p2@MLST8 | |||
}} |
Revision as of 01:52, 12 January 2014
Short description: | p2@MLST8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MLST8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000397124, NM_001199174, uc002cpf.2, uc002cpg.2, uc002cph.2, uc010uvy.1_5end |
EntrezGene: | MLST8 |
HGNC: | 24825 |
UniProt: | Q9BVC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.91e-18 | 250 |
epithelial cell | 2.14e-13 | 253 |
ectodermal cell | 4.83e-09 | 72 |
migratory neural crest cell | 5.40e-09 | 41 |
neurectodermal cell | 2.26e-08 | 59 |
mesodermal cell | 2.37e-07 | 121 |
pigment cell | 9.76e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
epithelium | 6.18e-11 | 306 |
cell layer | 1.05e-10 | 309 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.04e-10 | 239 |
cancer | 3.07e-10 | 235 |