FFCP PHASE1:Hg19::chr17:18330200..18330213,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt=C9JH30 | |||
|association_with_transcript=25bp_to_ENST00000326333,uc010vxz.1_5end | |||
|coexpression_cluster_id=C2397 | |||
|description=CAGE_peak_2_at_ENST00000326333_5end,CAGE_peak_2_at_uc010vxz.1_5end | |||
|id=chr17:18330200..18330213,+ | |||
|ontology_enrichment_celltype=CL:0002166!5.63e-23!3;CL:0000197!1.40e-11!6;CL:0000098!1.40e-11!6;CL:0002167!1.40e-11!6;CL:0002541!3.16e-10!3;CL:0002327!8.28e-08!4;CL:0002077!1.50e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002166;3.70e-38;3!CL:0000197;1.75e-09;6!CL:0000098;1.75e-09;6!CL:0002167;1.75e-09;6!CL:0002159;1.13e-08;14!CL:0002077;2.57e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,3.06e-38,3;CL:0000197,1.68e-09,6;CL:0000098,1.68e-09,6;CL:0002167,1.68e-09,6;CL:0002077,2.81e-09,34;CL:0002159,1.09e-08,14;CL:0000066,6.27e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.11e-26;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!8.03e-64!9;UBERON:0001557!1.48e-29!19;UBERON:0001708!2.20e-17!4;UBERON:0001704!2.20e-17!4;UBERON:0008947!4.33e-14!38;UBERON:0003258!4.33e-14!38;UBERON:0000065!4.68e-12!53;UBERON:0002090!9.09e-12!6;UBERON:0000072!2.14e-11!46;UBERON:0000476!3.16e-10!3;UBERON:0000920!3.16e-10!3;UBERON:0001004!1.96e-08!72;UBERON:0005631!3.32e-08!14;UBERON:0000158!3.32e-08!14;UBERON:0001911!8.28e-08!4;UBERON:0005333!8.28e-08!4;UBERON:0008425!8.28e-08!4;UBERON:0005311!8.28e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.44e-86;9!UBERON:0001557;2.44e-86;9!UBERON:0001708;8.11e-29;4!UBERON:0008895;8.11e-29;4!UBERON:0011159;3.34e-23;5!UBERON:0000065;1.33e-20;44!UBERON:0000072;2.03e-19;37!UBERON:0011137;6.86e-11;11!UBERON:0010323;6.86e-11;11!UBERON:0001004;3.04e-10;65!UBERON:0000075;1.19e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.42e-86,9;UBERON:0001557,1.47e-40,19;UBERON:0001708,7.04e-29,4;UBERON:0008895,7.04e-29,4;UBERON:0011159,2.99e-23,5;UBERON:0008947,5.96e-20,38;UBERON:0003258,5.96e-20,38;UBERON:0010188,1.71e-19,6;UBERON:0002539,1.71e-19,6;UBERON:0008816,1.71e-19,6;UBERON:0000065,1.61e-17,54;UBERON:0000072,5.45e-16,47;UBERON:0001004,1.61e-12,74;UBERON:0010323,6.53e-11,11;UBERON:0011137,1.09e-08,14;UBERON:0001041,2.88e-08,87;UBERON:0000075,1.15e-07,16;UBERON:0008814,7.23e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0.863077176966451,0,0.709446689665756,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828147600278907,1.85443159085912,2.41011029883482,1.32352767278873,2.17879444092406,2.37270619111097,1.48314438976181,1.56977172100277,3.07797725557112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,3.02367830757947,4.67857820899875,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67986696238627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41361390913056,3.11038630016486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@ENST00000326333,p2@uc010vxz.1 | |||
}} |
Revision as of 14:10, 20 January 2014
Short description: | p2@ENST00000326333, p2@uc010vxz.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_2_at_ENST00000326333_5end, CAGE_peak_2_at_uc010vxz.1_5end |
Coexpression cluster: | C2397_nasal_immature_Hep2_Mallassezderived_Small_amniotic_acute |
Association with transcript: | 25bp_to_ENST00000326333, uc010vxz.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 3.06e-38 | 3 |
receptor cell | 1.68e-09 | 6 |
sensory epithelial cell | 1.68e-09 | 6 |
olfactory epithelial cell | 1.68e-09 | 6 |
ecto-epithelial cell | 2.81e-09 | 34 |
general ecto-epithelial cell | 1.09e-08 | 14 |
epithelial cell | 6.27e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.42e-86 | 9 |
upper respiratory tract | 1.47e-40 | 19 |
jaw skeleton | 7.04e-29 | 4 |
splanchnocranium | 7.04e-29 | 4 |
primary subdivision of cranial skeletal system | 2.99e-23 | 5 |
respiratory primordium | 5.96e-20 | 38 |
endoderm of foregut | 5.96e-20 | 38 |
protuberance | 1.71e-19 | 6 |
pharyngeal arch | 1.71e-19 | 6 |
embryonic head | 1.71e-19 | 6 |
respiratory tract | 1.61e-17 | 54 |
segment of respiratory tract | 5.45e-16 | 47 |
respiratory system | 1.61e-12 | 74 |
cranial skeletal system | 6.53e-11 | 11 |
axial skeletal system | 1.09e-08 | 14 |
foregut | 2.88e-08 | 87 |
subdivision of skeletal system | 1.15e-07 | 16 |
pharyngeal arch system | 7.23e-07 | 18 |