FFCP PHASE1:Hg19::chr18:55816546..55816559,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23327 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7728 | |||
|TSSclassifier=not | |||
|UniProt=Q3LSM7,Q96PU5 | |||
|association_with_transcript=-5bp_to_ENST00000357895,ENST00000435432,NM_001144965,NM_001144968,NM_001144969,NM_001144971,uc002lhb.2,uc002lhc.2,uc002lhd.2,uc002lhe.2_5end | |||
|description=CAGE_peak_10_at_NEDD4L_5end | |||
|id=chr18:55816546..55816559,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.46e-12;1!UBERON:0005754;2.46e-12;1!UBERON:0004874;4.31e-12;1!UBERON:0007297;8.52e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.14e-17!35;UBERON:0006947!4.12e-15!3;UBERON:0004054!4.12e-15!3;UBERON:0007023!8.47e-15!115;UBERON:0004921!6.22e-14!129;UBERON:0004185!6.22e-14!129;UBERON:0000160!1.07e-12!27;UBERON:0003101!2.06e-12!22;UBERON:0000079!2.06e-12!22;UBERON:0005904!1.86e-11!4;UBERON:0000007!2.84e-11!2;UBERON:0000059!3.22e-11!11;UBERON:0001007!9.52e-11!155;UBERON:0001555!9.52e-11!155;UBERON:0007026!9.52e-11!155;UBERON:0003135!1.45e-10!11;UBERON:0004119!1.68e-10!169;UBERON:0000925!1.68e-10!169;UBERON:0006595!1.68e-10!169;UBERON:0001155!3.80e-09!9;UBERON:0000481!5.86e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.98e-38;17!UBERON:0005409;1.29e-37;22!UBERON:0000059;3.23e-25;11!UBERON:0000007;8.98e-24;2!UBERON:0004921;2.12e-23;33!UBERON:0002108;3.07e-20;4!UBERON:0001155;3.45e-20;9!UBERON:0006947;1.06e-15;3!UBERON:0004054;1.06e-15;3!UBERON:0001000;1.75e-12;1!UBERON:0005352;1.75e-12;1!UBERON:0003296;2.20e-12;4!UBERON:0010133;2.20e-12;4!UBERON:0001154;2.46e-12;1!UBERON:0000998;2.46e-12;1!UBERON:0001153;2.46e-12;1!UBERON:0006868;2.46e-12;1!UBERON:0009854;2.46e-12;1!UBERON:0000989;4.31e-12;1!UBERON:0008811;4.31e-12;1!UBERON:0005904;5.10e-12;4!UBERON:0001555;6.24e-10;54!UBERON:0004907;1.08e-09;5!UBERON:0003135;1.51e-09;11!UBERON:0003101;2.80e-08;22!UBERON:0000079;2.80e-08;22!UBERON:0001894;1.90e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.64e-38,17;UBERON:0005409,3.30e-33,25;UBERON:0000059,2.92e-25,11;UBERON:0000007,8.98e-24,2;UBERON:0002108,2.97e-20,4;UBERON:0001155,3.20e-20,9;UBERON:0006947,1.14e-15,3;UBERON:0004054,1.14e-15,3;UBERON:0001000,1.75e-12,1;UBERON:0005352,1.75e-12,1;UBERON:0001154,2.20e-12,1;UBERON:0001153,2.20e-12,1;UBERON:0001045,2.20e-12,1;UBERON:0003296,2.20e-12,4;UBERON:0010133,2.20e-12,4;UBERON:0000998,2.75e-12,1;UBERON:0006868,2.75e-12,1;UBERON:0000989,4.31e-12,1;UBERON:0008811,4.31e-12,1;UBERON:0006258,4.31e-12,1;UBERON:0005876,4.31e-12,1;UBERON:0004874,4.31e-12,1;UBERON:0005904,5.40e-12,4;UBERON:0004921,9.35e-10,118;UBERON:0004907,1.01e-09,5;UBERON:0003135,1.56e-09,11;UBERON:0007023,1.94e-08,114;UBERON:0003101,2.88e-08,22;UBERON:0000079,2.88e-08,22;UBERON:0001007,1.16e-07,145;UBERON:0001555,1.16e-07,145;UBERON:0007026,1.16e-07,145;UBERON:0011216,1.36e-07,223;UBERON:0001894,1.90e-07,7;UBERON:0006222,1.90e-07,7;UBERON:0004119,8.46e-07,160;UBERON:0000925,8.46e-07,160;UBERON:0006595,8.46e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42054264849836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349839999984783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628303510868405,0.651884231532048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8862863458841,6.89969003126046,25.6632660872123,0,0,0,0,0,0,0,0,0,9.47002566838537,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0.548257766857182,1.48863353516788,0,0.255524855279191,0,0,46.7363515262206,20.7172594129681,0.177404740325278,0,0,0,0,0,0.111231401892069,23.4694347623037,0,0,2.73947616152849,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,4.23387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0588013230341,10.7272079770043,2.40415516554353,12.2282497053996,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,4.3820183294791,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.476128862927481,0,0.124149428591716,0,0,0,0,0,0.134704106029175,0.358611026963382,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p10@NEDD4L | |||
}} |
Revision as of 19:31, 20 January 2014
Short description: | p10@NEDD4L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_NEDD4L_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000357895, ENST00000435432, NM_001144965, NM_001144968, NM_001144969, NM_001144971, uc002lhb.2, uc002lhc.2, uc002lhd.2, uc002lhe.2_5end |
EntrezGene: | NEDD4L |
HGNC: | 7728 |
UniProt: | Q3LSM7Q96PU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data