FFCP PHASE1:Hg19::chr19:4338783..4338834,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55620 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30430 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UGK3 | |||
|association_with_transcript=12bp_to_ENST00000314714,ENST00000424810,NM_001013841,NM_017720_5end | |||
|coexpression_cluster_id=C543 | |||
|description=CAGE_peak_1_at_STAP2_5end | |||
|id=chr19:4338783..4338834,- | |||
|ontology_enrichment_celltype=CL:0000066!2.41e-44!254;CL:0002321!1.01e-20!248;CL:0000220!2.07e-20!246;CL:0000223!4.65e-16!59;CL:0002076!8.16e-14!43;CL:0000076!9.48e-12!62;CL:1000497!1.31e-09!18;CL:0002518!1.31e-09!18;CL:0002077!5.05e-09!33;CL:1000449!1.00e-08!16;CL:0000213!4.40e-08!57;CL:0000215!4.40e-08!57;CL:0002368!1.34e-07!13;CL:0000075!1.90e-07!27;CL:0002251!2.12e-07!21;CL:0002681!5.50e-07!13;CL:0002584!5.50e-07!13;CL:1000507!7.08e-07!12;CL:1000494!7.08e-07!12;CL:0002078!9.73e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.73e-12;42!CL:1000497;6.01e-11;17!CL:0002518;6.01e-11;17!CL:1000449;5.35e-10;15!CL:0002251;1.98e-08;20!CL:0002368;4.01e-08;13!CL:0002681;4.32e-08;12!CL:0002584;4.32e-08;12!CL:0002077;4.81e-08;34!CL:1000507;6.75e-08;10!CL:1000494;6.75e-08;10!CL:0000075;1.48e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.42e-49,253;CL:0002321,1.44e-20,250;CL:0000223,3.70e-18,58;CL:0002076,1.22e-15,42;CL:0000076,9.80e-12,63;CL:1000497,6.03e-11,17;CL:0002518,6.03e-11,17;CL:1000449,5.29e-10,15;CL:0002077,3.03e-09,34;CL:0002251,2.46e-08,20;CL:0000213,3.42e-08,58;CL:0000215,3.42e-08,58;CL:0002681,4.22e-08,12;CL:0002584,4.22e-08,12;CL:0002368,4.49e-08,13;CL:0000075,6.54e-08,27;CL:1000507,6.83e-08,10;CL:1000494,6.83e-08,10;CL:0002078,5.41e-07,45 | |||
|ontology_enrichment_development_v019=CL:0000223;4.13e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.77e-22!169;UBERON:0000925!1.77e-22!169;UBERON:0006595!1.77e-22!169;UBERON:0001007!4.84e-17!155;UBERON:0001555!4.84e-17!155;UBERON:0007026!4.84e-17!155;UBERON:0005177!5.42e-15!107;UBERON:0000466!5.59e-15!126;UBERON:0004921!9.31e-14!129;UBERON:0004185!9.31e-14!129;UBERON:0003104!2.15e-13!238;UBERON:0009142!2.15e-13!238;UBERON:0005911!1.89e-12!82;UBERON:0000077!3.61e-12!130;UBERON:0000464!1.18e-11!104;UBERON:0001008!1.34e-11!45;UBERON:0000481!1.49e-11!347;UBERON:0006554!1.51e-11!44;UBERON:0003064!1.01e-10!37;UBERON:0000058!6.92e-10!26;UBERON:0004876!8.25e-10!20;UBERON:0002100!9.02e-10!216;UBERON:0005172!1.00e-09!55;UBERON:0005173!1.00e-09!55;UBERON:0000080!1.83e-09!18;UBERON:0002120!1.83e-09!18;UBERON:0004875!1.83e-09!18;UBERON:0005721!1.83e-09!18;UBERON:0005754!1.83e-09!18;UBERON:0007297!1.83e-09!18;UBERON:0009569!2.15e-09!113;UBERON:0006555!4.94e-09!17;UBERON:0005103!4.94e-09!17;UBERON:0000083!4.94e-09!17;UBERON:0009201!4.94e-09!17;UBERON:0004819!4.94e-09!17;UBERON:0006553!4.94e-09!17;UBERON:0003074!4.94e-09!17;UBERON:0003060!4.94e-09!17;UBERON:0002530!6.24e-09!59;UBERON:0004211!1.00e-08!16;UBERON:0001285!1.00e-08!16;UBERON:0007684!1.00e-08!16;UBERON:0003220!1.00e-08!16;UBERON:0004208!1.00e-08!16;UBERON:0001041!2.05e-08!98;UBERON:0000161!2.46e-08!35;UBERON:0003929!2.85e-08!54;UBERON:0000475!4.74e-08!365;UBERON:0002365!5.32e-08!31;UBERON:0002330!5.32e-08!31;UBERON:0002113!6.00e-08!27;UBERON:0003918!6.00e-08!27;UBERON:0005095!6.00e-08!27;UBERON:0007687!6.00e-08!27;UBERON:0001444!6.56e-08!48;UBERON:0002553!2.06e-07!70;UBERON:0003887!2.31e-07!21;UBERON:0001048!2.51e-07!168;UBERON:0000489!4.08e-07!32;UBERON:0005256!4.52e-07!143;UBERON:0002417!4.65e-07!61;UBERON:0000916!4.65e-07!61;UBERON:0001225!5.50e-07!13;UBERON:0008987!5.50e-07!13;UBERON:0000166!6.55e-07!21;UBERON:0009773!7.08e-07!12;UBERON:0001231!7.08e-07!12;UBERON:0004810!7.08e-07!12;UBERON:0001851!8.86e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;3.65e-11;30!UBERON:0001008;3.65e-11;30!UBERON:0006555;5.35e-10;15!UBERON:0004819;5.35e-10;15!UBERON:0001285;5.35e-10;15!UBERON:0007684;5.35e-10;15!UBERON:0004921;1.42e-09;33!UBERON:0002365;8.01e-09;31!UBERON:0002330;8.01e-09;31!UBERON:0001225;4.32e-08;12!UBERON:0008987;4.32e-08;12!UBERON:0002113;5.34e-08;24!UBERON:0011143;5.34e-08;24!UBERON:0004211;6.75e-08;10!UBERON:0009773;6.75e-08;10!UBERON:0001231;6.75e-08;10!UBERON:0004810;6.75e-08;10!UBERON:0001851;1.62e-07;15!UBERON:0000353;1.99e-07;15!UBERON:0000489;4.32e-07;29!UBERON:0005172;5.84e-07;52!UBERON:0005173;5.84e-07;52!UBERON:0001555;8.86e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.22e-22,160;UBERON:0000925,6.22e-22,160;UBERON:0006595,6.22e-22,160;UBERON:0005177,6.77e-17,101;UBERON:0001007,1.15e-16,145;UBERON:0001555,1.15e-16,145;UBERON:0007026,1.15e-16,145;UBERON:0001008,3.03e-14,48;UBERON:0006554,3.41e-14,47;UBERON:0004921,3.72e-14,118;UBERON:0005911,2.11e-13,82;UBERON:0005172,9.95e-11,54;UBERON:0005173,9.95e-11,54;UBERON:0006555,2.56e-10,16;UBERON:0004819,2.56e-10,16;UBERON:0009569,2.98e-10,112;UBERON:0004211,5.29e-10,15;UBERON:0009773,5.29e-10,15;UBERON:0001231,5.29e-10,15;UBERON:0001285,5.29e-10,15;UBERON:0007684,5.29e-10,15;UBERON:0004208,5.29e-10,15;UBERON:0002100,1.01e-09,199;UBERON:0002530,1.69e-09,59;UBERON:0002113,7.66e-09,26;UBERON:0003918,7.66e-09,26;UBERON:0011143,7.66e-09,26;UBERON:0005095,7.66e-09,26;UBERON:0007687,7.66e-09,26;UBERON:0002365,7.71e-09,31;UBERON:0002330,7.71e-09,31;UBERON:0003929,8.77e-09,54;UBERON:0001041,1.52e-08,87;UBERON:0001225,4.22e-08,12;UBERON:0008987,4.22e-08,12;UBERON:0000489,6.17e-08,31;UBERON:0000161,6.40e-08,36;UBERON:0000153,6.69e-08,62;UBERON:0007811,6.69e-08,62;UBERON:0004810,6.83e-08,10;UBERON:0002417,7.68e-08,60;UBERON:0000916,7.68e-08,60;UBERON:0000033,1.54e-07,56;UBERON:0001851,1.59e-07,15;UBERON:0000353,2.03e-07,15;UBERON:0005631,4.85e-07,14;UBERON:0000158,4.85e-07,14;UBERON:0000058,5.25e-07,19;UBERON:0003064,6.38e-07,28;UBERON:0003104,8.78e-07,160;UBERON:0009142,8.78e-07,160 | |||
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| |||
|short_description=p1@STAP2 | |||
}} |
Revision as of 20:39, 20 January 2014
Short description: | p1@STAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STAP2_5end |
Coexpression cluster: | C543_Alveolar_Corneal_Urothelial_amniotic_Esophageal_Tracheal_esophagus |
Association with transcript: | 12bp_to_ENST00000314714, ENST00000424810, NM_001013841, NM_017720_5end |
EntrezGene: | STAP2 |
HGNC: | 30430 |
UniProt: | Q9UGK3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.42e-49 | 253 |
embryonic cell | 1.44e-20 | 250 |
endodermal cell | 3.70e-18 | 58 |
endo-epithelial cell | 1.22e-15 | 42 |
squamous epithelial cell | 9.80e-12 | 63 |
kidney cell | 6.03e-11 | 17 |
kidney epithelial cell | 6.03e-11 | 17 |
epithelial cell of nephron | 5.29e-10 | 15 |
ecto-epithelial cell | 3.03e-09 | 34 |
epithelial cell of alimentary canal | 2.46e-08 | 20 |
lining cell | 3.42e-08 | 58 |
barrier cell | 3.42e-08 | 58 |
kidney cortical cell | 4.22e-08 | 12 |
renal cortical epithelial cell | 4.22e-08 | 12 |
respiratory epithelial cell | 4.49e-08 | 13 |
columnar/cuboidal epithelial cell | 6.54e-08 | 27 |
kidney tubule cell | 6.83e-08 | 10 |
nephron tubule epithelial cell | 6.83e-08 | 10 |
meso-epithelial cell | 5.41e-07 | 45 |