FFCP PHASE1:Hg19::chr19:41356347..41356353,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=1548 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2610 | |||
|TSSclassifier=weak | |||
|UniProt=P11509 | |||
|association_with_transcript=0bp_to_ENST00000301141,NM_000762,uc002opl.3,uc010ehe.1,uc010ehf.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_CYP2A6_5end | |||
|id=chr19:41356347..41356353,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.82e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.75e-14,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.49e-07;11 | |||
|ontology_enrichment_disease=DOID:114!9.02e-15!2;DOID:178!2.69e-08!1;DOID:326!2.69e-08!1;DOID:3978!2.69e-08!1;DOID:3394!2.69e-08!1;DOID:5844!2.69e-08!1;DOID:1287!7.97e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:3493;3.13e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.99e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.13e-10!115;UBERON:0009497!8.16e-10!25;UBERON:0000015!8.16e-10!25;UBERON:0002423!8.16e-10!25;UBERON:0006235!8.16e-10!25;UBERON:0004161!8.16e-10!25;UBERON:0002107!2.24e-09!19;UBERON:0006925!2.24e-09!19;UBERON:0008836!2.24e-09!19;UBERON:0002146!3.33e-08!1;UBERON:0005623!3.33e-08!1;UBERON:0008835!4.62e-08!22;UBERON:0003894!4.62e-08!22;UBERON:0006834!5.82e-08!1;UBERON:0007190!6.68e-08!1;UBERON:0009854!1.06e-07!23;UBERON:0003929!2.96e-07!54;UBERON:0007499!4.61e-07!25;UBERON:0005911!6.60e-07!82;UBERON:0005057!8.83e-07!26;UBERON:0009856!8.83e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.18e-24;19!UBERON:0006925;6.18e-24;19!UBERON:0002423;3.07e-18;25!UBERON:0002365;1.04e-14;31!UBERON:0002330;1.04e-14;31!UBERON:0002368;9.72e-13;33!UBERON:0000949;2.56e-09;43!UBERON:0005172;8.44e-07;52!UBERON:0005173;8.44e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.18e-24,19;UBERON:0006925,6.18e-24,19;UBERON:0008836,6.18e-24,19;UBERON:0008835,1.06e-20,22;UBERON:0003894,1.06e-20,22;UBERON:0009854,8.25e-20,23;UBERON:0007499,3.07e-18,25;UBERON:0009497,3.07e-18,25;UBERON:0000015,3.07e-18,25;UBERON:0002423,3.07e-18,25;UBERON:0006235,3.07e-18,25;UBERON:0004161,3.07e-18,25;UBERON:0009856,1.52e-17,26;UBERON:0002365,9.71e-15,31;UBERON:0002330,9.71e-15,31;UBERON:0002368,4.55e-13,35;UBERON:0003929,6.19e-12,54;UBERON:0000949,3.50e-10,45;UBERON:0005172,1.72e-08,54;UBERON:0005173,1.72e-08,54;UBERON:0005911,8.48e-08,82;UBERON:0002530,8.99e-08,59;UBERON:0002417,1.21e-07,60;UBERON:0000916,1.21e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70272798147026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,328.295540188542,18.6737171168749,530.529336199901,0,2.45976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,438.233422537763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,422.423234085408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,19.3866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0.599037001496973,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,503.113818216857,18.550964447711,0,0,0,0,0.854299300541557,0.628817220398664,0,0,0,0,0,0.544017803369474,0.7520696820681,0,0,0,0,0,0,0,0,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8041122745922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p1@CYP2A6 | |||
}} |
Revision as of 23:24, 20 January 2014
Short description: | p1@CYP2A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CYP2A6_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000301141, NM_000762, uc002opl.3, uc010ehe.1, uc010ehf.1_5end |
EntrezGene: | CYP2A6 |
HGNC: | 2610 |
UniProt: | P11509 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.75e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 6.18e-24 | 19 |
digestive gland | 6.18e-24 | 19 |
liver bud | 6.18e-24 | 19 |
hepatic diverticulum | 1.06e-20 | 22 |
liver primordium | 1.06e-20 | 22 |
digestive tract diverticulum | 8.25e-20 | 23 |
epithelial sac | 3.07e-18 | 25 |
epithelium of foregut-midgut junction | 3.07e-18 | 25 |
anatomical boundary | 3.07e-18 | 25 |
hepatobiliary system | 3.07e-18 | 25 |
foregut-midgut junction | 3.07e-18 | 25 |
septum transversum | 3.07e-18 | 25 |
sac | 1.52e-17 | 26 |
exocrine gland | 9.71e-15 | 31 |
exocrine system | 9.71e-15 | 31 |
endocrine gland | 4.55e-13 | 35 |
gut epithelium | 6.19e-12 | 54 |
endocrine system | 3.50e-10 | 45 |
abdomen element | 1.72e-08 | 54 |
abdominal segment element | 1.72e-08 | 54 |
endo-epithelium | 8.48e-08 | 82 |
gland | 8.99e-08 | 59 |
abdominal segment of trunk | 1.21e-07 | 60 |
abdomen | 1.21e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.99e-10 | 2 |