FFCP PHASE1:Hg19::chr19:54969352..54969372,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114823 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15500 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-221bp_to_ENST00000421200_5end | |||
|description=CAGE_peak_5_at_LENG8_5end | |||
|id=chr19:54969352..54969372,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000624;2.31e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.34e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.52e-10!115;UBERON:0002020!2.86e-07!34;UBERON:0003528!2.86e-07!34;UBERON:0002780!2.95e-07!41;UBERON:0001890!2.95e-07!41;UBERON:0006240!2.95e-07!41;UBERON:0001049!3.37e-07!57;UBERON:0005068!3.37e-07!57;UBERON:0006241!3.37e-07!57;UBERON:0007135!3.37e-07!57;UBERON:0002791!8.92e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;8.88e-07;34!UBERON:0002020;8.88e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.03e-09,56;UBERON:0005068,1.03e-09,56;UBERON:0006241,1.03e-09,56;UBERON:0007135,1.03e-09,56;UBERON:0007023,6.12e-09,114;UBERON:0003528,1.20e-08,34;UBERON:0002020,1.20e-08,34;UBERON:0002780,2.99e-08,41;UBERON:0001890,2.99e-08,41;UBERON:0003080,2.99e-08,41;UBERON:0006240,2.99e-08,41;UBERON:0000073,4.30e-08,53;UBERON:0002616,4.30e-08,53;UBERON:0002791,1.70e-07,32;UBERON:0002346,6.38e-07,86;UBERON:0001893,8.34e-07,34 | |||
|phase1_expression=0.726713517082227,2.14100523890983,0.704772020479856,0,0.893922188854576,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0.247532705920093,0,0,0,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0.286235987131057,0.273748850145768,0.502170558379211,1.83392173795083,0.492603536699674,0.787107813136792,0.786728553697808,0.383829398097213,0.464448369948228,0,0,0,0.92960640696362,0.426507697462265,0,1.10799081706375,2.20598892217156,0,0,0,0.515151135268373,1.30858414901608,0.377875943688809,0.485168122375632,0.464858073811369,0.822335776043652,0.929119112685311,2.01384674625505,0,0.236482229888585,0.689491361473237,0.645484683583826,0,1.31769637679823,0.272906150057846,0.674170453335254,0,0,0.639337125799041,0.659702600373432,0.797854630486527,0,1.16083695451434,1.13477044938228,0.622822248995575,1.00499466102697,0.521482918420201,0.434377689410233,0.605399502633369,0,0.632924774881769,1.05627643155971,1.4882300997553,0.419317291016752,0.561643155732475,1.05123824989054,0.16072558669708,0.855038231223746,1.19350006319454,1.46131323011707,0,0,0.889509253863555,0.426730222566507,0,0.574752439954483,0,0,1.70763890732835,2.34894875748376,1.91136614062614,0,0,0.263384084775077,1.37696839079683,4.71612915298998,1.64481199199607,0.668745981562712,1.30368906653436,1.89379122293893,1.94826728407911,0.668462741311041,2.65145316727353,2.21533894583621,1.62482318259009,0.768547918354051,1.95089021339817,1.31550323682941,1.38175008892924,1.73881851441031,2.66915813691709,1.07016331235885,4.18142095219907,1.24640276967323,1.53288197440768,1.03088233644789,3.79529538029254,0.637130828648193,0,0,0,0.383959833463255,1.24930726552346,0.473554504088034,0,1.41124720257313,2.40696176205157,1.88271725047639,0,0,0,1.44575660953827,0,0.869079113764942,0,0,0.189069634328136,0.886917589850256,0.614843499851882,0.72038491523742,0,0,0.324547393654683,0.870648686496336,0.664789802594326,1.19245312152671,0,0,0,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,1.06729878806013,0.66944122552934,1.20848795132744,0,0.488124115096339,0.367663080345869,0.81014194788176,0.357198913136319,0.44905874525234,0.225222960966644,1.53316637465883,0,0.549605231791222,0,3.87780264148325,1.3082821564276,0.993943903390637,0.506522046658319,2.51577443545116,1.72101972449288,0,0,0,0.24666754841716,0.622422070799533,0.404132016209064,0.490385709340376,0.302714855289863,0,0,0.312160076830321,0,0.298897361103602,0.117434498643765,0,0,0.61246251376468,0.245668634623536,0.206651562351531,0,0,0,0.718618141816238,0.673344455816265,0.625592599359821,0,0,0.919463387397059,0.150238058906597,0.113432183160021,2.69084453533293,1.06778694409284,0.635795703478686,3.30100205692843,0.206105058476878,3.86460810068444,0.930584281657949,2.53164498361899,0.194874010322397,3.5340728394176,0.368199594569197,0.80823028409406,1.77504796258307,0.503760491138201,0.169560592310488,0,0.272746120590835,0,0.609868530647977,0.132529768321485,0.813357600086629,0.725627385107593,0.252320850875628,0.36497735907583,0,0,0,1.85747171212792,0.721879481669586,0.118306800039844,0.168584690078102,0,0.330881918197182,0.217879444092406,0.474541238222193,0.674156540800822,1.17732879075208,0.769494313892781,0,0,0,0,1.26755034821831,0.982827216677626,1.77236972004421,0.882926198829301,0.614942192715568,0.686271241194102,0.548751427043128,0,0.603173834469785,0.370353780634118,0,0,0,0.463721619900307,0.234817388471643,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0.335964256397719,0.425325291727159,0.0895585227028483,0,0,0,0.528290604079356,0.414656231081544,0.432359860250884,0.37872730027914,0.253991577168676,0,0,0,0.411309970813294,0.300343057843917,0.857479297891735,0.336393253036082,0.43596006883328,0.07333828582095,0.775630294546667,0,0,0,2.08014873822732,0.514414748524284,0,0.266422179016099,0.57191197463259,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,8.43335757932127,0,1.14861935834114,0,0.868687840005475,0.821905290201534,0.716243852959582,0.448340575974109,1.37921532141349,1.50939302401662,1.02674429023799,0.254094624222463,0,0.773288812777695,0.502548796003046,1.27587750330633,0.749007023947182,0,0.414415513436035,0.12269149171914,0.500170521059677,0,0.415941723061614,4.46072471992904,0.630809660135739,0.702848489956279,0,0,1.03473071292505,0,0,0.0868836144680828,0.587403472388222,1.02943027143257,1.86091223510599,2.5885704098234,1.60091336705167,0,0,0,1.73675465473144,1.53461973288062,1.68396056659844,0.128139149255701,0.511707249066704,0.160853921143607,1.48418066444991,0.462629081407967,0.355123450626254,0.328508624055237,0.519254429183621,0.581051892299796,0.604297247958111,1.20303882181971,0.460404944679482,0,0.546273504020151,0.524497659837696,1.35359883872224,0.0770153371044148,0,0,0.73886140225013,0,0,0.215915916102139,0,0,0,0,0,0,0,0.261435451024901,0,0.328014645699706,0.650756789328606,0.309123034943167,0.457847324091717,0.165018999841176,0,0.650060246036521,0,0.193341436584244,0.154048617114644,0.15350367472613,0.275673144969061,0.429680979473094,0.435050081742686,0.170453254832202,0.178064071293475,0.661139661443912,0.384380134730212,3.57315594984836,0.6069466851333,0.464845549297286,4.7221852024596,0,0,0,0,0,0,0,0,0.38126038784765,0,0.42793898803392,0,0,0.179872457583315,0,0.471249609382746,0,0,0,0,1.70599442741899,0,0.136499911407986,0.707027159768564,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0,0.286822704408103,0.0982490410131212,0,0.354761064070598,1.05553817648832,0.329294892959902,0,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0.229723400206959,2.02979043692868,0.764637207142375,4.5571774973933,1.42939065274673,2.46817363851717,0,1.62009431171434,2.37937552888281,0.213648142254946,0,0.245040215981032,0,0.28853842595289,0.569134746787313,0,0.399158742865633,0.383010740264733,1.48171507906718,0.324621940274555,0.842391534340376,0.228234679033192,0.626719583092093,0,0.169291777801603,0.642352300414798,0.605399121573143,0,0.343505344755765,0.614481528616916,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0,0,0,0.37428108081644,0.586032717087576,0,0.557216921387392,0.568272293612826,0,0,0,1.9882952955326,1.40669416410513,0.667852230137435,0.329607748453519,0.844501632511974,1.39473591775749,0.828851746593443,1.76352923497993,0.306806047506464,0.123084805461069,1.55519793830904,0.179736702294654,0.179021174675609,0.511572370226872,0.493217028184668,0,0,0.969332746095218,0.371072392647405,0,0,0.174919999992391,0,0.227586896570999,0.254253650292766,0,0.344743373241465,0.874813840149763,0.347249989866585,0.885741385813839,1.20596438625408,0,1.99042667876204,1.47773809476774,0.219385397153973,0.10893846351899,0.41827123283581,1.30815439456455,0.113942055847001,0.46112780877612,0.987334088507493,0.434589487688032,0.31900115973192,0.0915975934018623,2.13213910407454,0,0.627921025580099,1.32969345520125,0.451191321234361,0.392125068635479,0.503464760927528,0.189753732724185,0.317873157960757,1.26598838716816,0.326465616318295,0.141353071433941,0.216388639742091,1.99052386215701,0.353830258013357,0.611030144933625,0.296521128680622,0.741383633679017,0.522109747527277,0.741412462787447,1.60515529459758,0.468528891450678,0.91227394607833,0.391329237864179,0.728341138602278,2.36750641709634,2.41981432097328,1.53036380815245,0.505492637027904,0.300646838828985,0.207376382794494,0,0.330991955875499,0.313932918407225,0,0.569219092059585,0.416024019039416,0.694238953340524,0.0979923974143777,0.0870592065804026,1.57254001417827,0.171986032471617,0.677294319023596,0.146178634172371,0,0.581934098930517,0.441280633457501,1.58186518546373,0.274083849293502,0,0.379864775735272,0.195551382734803,0.480952921509202,0.426905989478705,0.999048047910651,0,0.458146384663663,0.857974989309823,1.58460277786965,0.124252535565433,0.471388069233591,0.67952103036807,0.209205692624666,0.713987523454252,0.577901179803038,1.20084057741958,1.50595916781192,0,1.28929632425987,0.525774708558629,1.11712960508902,0.458320848023367,0.717873024576814,0.798716001995964,1.28767814440971,0,0.671834724867263,1.44119953416961,0,0,0.247247575143499,0.471824806979294,0.0984274815147488,0.254019996197353,0,2.31545790389679,0.964518890790115,1.10031549277787,0.83088067605837,0,2.32140586367385,0.425246896606173,0.670869375198532,0.315222829196793,0.472091293214983,0.422401346077626,1.07572403599707,0.191915197319445,0,0,0,1.08599920350743,0.864221491201268,1.63293680054705,0,0.574647645245373,0.511164065356265,0,0,0,1.16354660725395,1.45455861916959,0.171086837884329,0,0.427149650270779,0.471612915298998,0.828478110694391,0.496166021811951,0.395223263795889,0.243585196761792,0.638341257770182,0,0.2506898940227,0.612691153526923,0,0,0,5.61320818549031,2.1282458220105,0,0.887432412294818,0.869349641179368,2.07522952404346,0,0,0.285465333544967,0.235265819698172,0.936669811613763,0.579684114443301,0.149254802886874,1.40227985908335,0.554805861502613,0,0.50313580350515,0.889811221596536,0.457680136793847,0.604923695052956,0.466311601748341,0,0.318593534327405,0,0.155262956876259,0.414706207840855,0.53168342911599,2.60872530905867,0.751288044986092,3.80805212168795,0,0.181848659202559,0.644463342254931,1.39210127963548,2.78667122089031,0.400027764663154,0.343395705182793,0.673498977531838,0,0.385239660814607,0.214441591374926,0,0.680117776536817,0.231522474323834,0.489473409012935,0.537266523244462,0.308801447160972,0.438568099157414,0,0.38582807654183,0.337884881306145,0.512483037175893,0.345430341731199,0.303859956177382,1.65910123382077,0,0.132864840313363,0.163565394255844,0.327609848846413,0.245772908753719,0.633936370075881,0.59996218756479,0.106691729694141,0,0.567515953566836,0,0.279759015438889,0.622077260032973,0.255788742607303,0.215649622793364,1.10086159299127,0.327628914576042,0.509197589862076,1.2754495206101,1.61116493536703,0,0.318004350653419,0.70975570501128,0.80057074828547,0.705351887381368,1.8374728641192,0.513833800771676,2.8339315265117,2.39450788585727,0.205116364240755,0.504143392443436,0.414943514785307,0.645902582527404,1.42769420259154,0.196295437002051,0,0.550285795565037,0.231051332300676,0,0,1.19349733269765,0.451261970095544,0,0.781514011233092,0.261906694481422,1.14640342257068,0.443568258651136,0.337687923091973,0.781078098613847,2.06686796501184,0.697573912132975,2.18789923607288,1.64477330057155,1.98484471355718,1.05522746615772,0.255524855279191,1.07140367175657,0.336283722218824,3.64179362541979,1.36597314810779,0.177404740325278,0.345701962667338,0.685952037749674,0.271878931907327,0.526182188502793,0.709163045303809,0.222462803784138,0.39246546425257,1.72827148907602,0,0,0.215927591218621,2.38875843943525,1.42953088353313,0.316027223465453,0.116241425368125,0.173858272302579,0,0.207216164163037,0.85359238546975,0,0,0,0.340853619036631,2.54032230114557,1.60374807980835,0.62041277132864,0,0.335566295393377,0.196300467230486,0.365753774946808,2.58971534875158,0.102662806856247,0,0.485710993059139,0.467878926924211,0.994753875806841,1.07028081699812,0.33883824611688,1.31928620094515,0,0.540219106755613,0.437119121007915,3.29222107453066,0.735444965261716,0.235676547101626,1.96308467114945,1.18818560130834,1.2679671827502,0.509781344063451,0.281951753939561,0.709036767709349,0.299823467774787,0,0,0.160482733378337,0.730336388246517,2.2936464170227,2.58011249672612,0.157771562193185,0.543931921527318,1.30905207102113,2.645134202577,2.60396512716726,0.462175628631418,0.865253124247578,0,0.109265571963696,0.253397002022874,0.61193297845189,0,0.18378979906969,1.0028301571695,0.378893491091197,1.07185652062471,0,1.65492793379032,0.852935927603924,0.952257725854961,0.129177819672012,1.24149428591716,0.448527450322454,0.318235791390825,0.606351566874658,0.653150243690884,0.342233301085281,0.606168477131288,0.430333232356058,0.332660356546013,0.0814032686109745,0.426909383510862,0,0.179650404213174,0,0.611207220914332,0.406896178315738,0.665756774185513,0.603821380773079,0.961705476909699 | |||
|short_description=p5@LENG8 | |||
}} |
Revision as of 01:05, 21 January 2014
Short description: | p5@LENG8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LENG8_5end |
Coexpression cluster: | NA |
Association with transcript: | -221bp_to_ENST00000421200_5end |
EntrezGene: | LENG8 |
HGNC: | 15500 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.34e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.03e-09 | 56 |
neural rod | 1.03e-09 | 56 |
future spinal cord | 1.03e-09 | 56 |
neural keel | 1.03e-09 | 56 |
adult organism | 6.12e-09 | 114 |
brain grey matter | 1.20e-08 | 34 |
gray matter | 1.20e-08 | 34 |
regional part of forebrain | 2.99e-08 | 41 |
forebrain | 2.99e-08 | 41 |
anterior neural tube | 2.99e-08 | 41 |
future forebrain | 2.99e-08 | 41 |
regional part of nervous system | 4.30e-08 | 53 |
regional part of brain | 4.30e-08 | 53 |
regional part of telencephalon | 1.70e-07 | 32 |
neurectoderm | 6.38e-07 | 86 |
telencephalon | 8.34e-07 | 34 |