FFCP PHASE1:Hg19::chr2:11679754..11679759,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9687 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24885 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-209bp_to_ENST00000263834_5end | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_26_at_GREB1_5end | |||
|id=chr2:11679754..11679759,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.76e-13!12;CL:0000417!2.76e-13!12;CL:0000668!2.76e-13!12;CL:0000414!2.76e-13!12;CL:0000412!2.76e-13!12;CL:0000182!2.76e-13!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.97e-34;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.98e-34,12;CL:0000223,4.33e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.80e-37;11!UBERON:0009497;1.86e-31;13!UBERON:0001041;1.90e-14;30!UBERON:0003104;1.84e-13;31!CL:0000223;8.24e-08;58 | |||
|ontology_enrichment_disease=DOID:7!3.36e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:7;3.96e-11;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.03e-11,39 | |||
|ontology_enrichment_uberon=UBERON:0006834!8.72e-18!1;UBERON:0001882!1.70e-17!1;UBERON:0005403!1.70e-17!1;UBERON:0002107!1.85e-14!19;UBERON:0006925!1.85e-14!19;UBERON:0008836!1.85e-14!19;UBERON:0008835!1.56e-12!22;UBERON:0003894!1.56e-12!22;UBERON:0009854!5.30e-12!23;UBERON:0007499!4.57e-11!25;UBERON:0009497!4.57e-11!25;UBERON:0000015!4.57e-11!25;UBERON:0002423!4.57e-11!25;UBERON:0006235!4.57e-11!25;UBERON:0004161!4.57e-11!25;UBERON:0005057!1.19e-10!26;UBERON:0009856!1.19e-10!26;UBERON:0002365!5.59e-09!31;UBERON:0002330!5.59e-09!31;UBERON:0002368!5.56e-08!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.37e-22;19!UBERON:0006925;5.37e-22;19!UBERON:0002423;4.64e-17;25!UBERON:0002365;1.90e-14;31!UBERON:0002330;1.90e-14;31!UBERON:0002368;1.70e-11;33!UBERON:0000949;1.64e-10;43!UBERON:0002530;3.55e-08;57!UBERON:0005172;1.92e-07;52!UBERON:0005173;1.92e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.37e-22,19;UBERON:0006925,5.37e-22,19;UBERON:0008836,5.37e-22,19;UBERON:0008835,3.41e-19,22;UBERON:0003894,3.41e-19,22;UBERON:0009854,2.02e-18,23;UBERON:0007499,4.64e-17,25;UBERON:0009497,4.64e-17,25;UBERON:0000015,4.64e-17,25;UBERON:0002423,4.64e-17,25;UBERON:0006235,4.64e-17,25;UBERON:0004161,4.64e-17,25;UBERON:0009856,1.86e-16,26;UBERON:0002365,5.04e-14,31;UBERON:0002330,5.04e-14,31;UBERON:0002368,1.42e-12,35;UBERON:0000949,4.55e-10,45;UBERON:0003929,1.34e-08,54;UBERON:0005172,1.34e-08,54;UBERON:0005173,1.34e-08,54;UBERON:0002530,5.66e-08,59;UBERON:0002417,7.34e-08,60;UBERON:0000916,7.34e-08,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10296455230113,0.576911008668165,1.21326378937533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902523940191087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p26@GREB1 | |||
}} |
Revision as of 01:45, 21 January 2014
Short description: | p26@GREB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_GREB1_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -209bp_to_ENST00000263834_5end |
EntrezGene: | GREB1 |
HGNC: | 24885 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.98e-34 | 12 |
endodermal cell | 4.33e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 5.37e-22 | 19 |
digestive gland | 5.37e-22 | 19 |
liver bud | 5.37e-22 | 19 |
hepatic diverticulum | 3.41e-19 | 22 |
liver primordium | 3.41e-19 | 22 |
digestive tract diverticulum | 2.02e-18 | 23 |
epithelial sac | 4.64e-17 | 25 |
epithelium of foregut-midgut junction | 4.64e-17 | 25 |
anatomical boundary | 4.64e-17 | 25 |
hepatobiliary system | 4.64e-17 | 25 |
foregut-midgut junction | 4.64e-17 | 25 |
septum transversum | 4.64e-17 | 25 |
sac | 1.86e-16 | 26 |
exocrine gland | 5.04e-14 | 31 |
exocrine system | 5.04e-14 | 31 |
endocrine gland | 1.42e-12 | 35 |
endocrine system | 4.55e-10 | 45 |
gut epithelium | 1.34e-08 | 54 |
abdomen element | 1.34e-08 | 54 |
abdominal segment element | 1.34e-08 | 54 |
gland | 5.66e-08 | 59 |
abdominal segment of trunk | 7.34e-08 | 60 |
abdomen | 7.34e-08 | 60 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.03e-11 | 39 |