FFCP PHASE1:Hg19::chr2:128175997..128176020,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5624 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9451 | |||
|TSSclassifier=weak | |||
|UniProt=P04070,F2Z2A0,E7EVH6,E7ENR9,B4DPQ7,F5H880 | |||
|association_with_transcript=0bp_to_ENST00000234071,ENST00000419985,ENST00000429925,ENST00000442644,ENST00000453608,ENST00000474030,ENST00000537436,uc002tok.2,uc002tol.2,uc010yzi.1,uc010yzj.1,uc010yzk.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_PROC_5end | |||
|id=chr2:128175997..128176020,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.30e-20!12;CL:0000417!1.30e-20!12;CL:0000668!1.30e-20!12;CL:0000414!1.30e-20!12;CL:0000412!1.30e-20!12;CL:0000182!1.30e-20!12;CL:0000223!6.79e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.29e-37;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.29e-37,12;CL:0000223,1.35e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.38e-30;11!UBERON:0009497;3.97e-25;13!UBERON:0003104;8.57e-23;31!UBERON:0001041;1.17e-10;30!CL:0000223;1.33e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.08e-25!19;UBERON:0006925!1.08e-25!19;UBERON:0008836!1.08e-25!19;UBERON:0009497!5.55e-23!25;UBERON:0000015!5.55e-23!25;UBERON:0002423!5.55e-23!25;UBERON:0006235!5.55e-23!25;UBERON:0004161!5.55e-23!25;UBERON:0005172!1.12e-22!55;UBERON:0005173!1.12e-22!55;UBERON:0005057!5.53e-22!26;UBERON:0008835!6.41e-22!22;UBERON:0003894!6.41e-22!22;UBERON:0009854!7.01e-21!23;UBERON:0002417!4.60e-20!61;UBERON:0000916!4.60e-20!61;UBERON:0007499!4.72e-19!25;UBERON:0009856!3.03e-18!26;UBERON:0003929!1.26e-15!54;UBERON:0002365!5.52e-15!31;UBERON:0002330!5.52e-15!31;UBERON:0005177!4.01e-14!107;UBERON:0002368!4.76e-13!35;UBERON:0005911!2.62e-12!82;UBERON:0009569!1.09e-11!113;UBERON:0000949!1.01e-09!45;UBERON:0004921!1.03e-09!129;UBERON:0004185!1.03e-09!129;UBERON:0002530!1.78e-08!59;UBERON:0003914!2.12e-08!118;UBERON:0001007!2.12e-08!155;UBERON:0001555!2.12e-08!155;UBERON:0007026!2.12e-08!155;UBERON:0000466!1.04e-07!126;UBERON:0000077!1.88e-07!130;UBERON:0004119!2.34e-07!169;UBERON:0000925!2.34e-07!169;UBERON:0006595!2.34e-07!169;UBERON:0001041!3.58e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.67e-47;19!UBERON:0006925;5.67e-47;19!UBERON:0002423;2.27e-35;25!UBERON:0002365;1.43e-27;31!UBERON:0002330;1.43e-27;31!UBERON:0002368;1.86e-24;33!UBERON:0000949;8.95e-18;43!UBERON:0005172;1.54e-16;52!UBERON:0005173;1.54e-16;52!UBERON:0002417;3.27e-12;58!UBERON:0000916;3.27e-12;58!UBERON:0002530;3.34e-10;57!UBERON:0001007;2.78e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.41e-47,19;UBERON:0006925,5.41e-47,19;UBERON:0008836,5.41e-47,19;UBERON:0008835,2.12e-40,22;UBERON:0003894,2.12e-40,22;UBERON:0009854,1.39e-38,23;UBERON:0007499,2.19e-35,25;UBERON:0009497,2.19e-35,25;UBERON:0000015,2.19e-35,25;UBERON:0002423,2.19e-35,25;UBERON:0006235,2.19e-35,25;UBERON:0004161,2.19e-35,25;UBERON:0009856,5.68e-34,26;UBERON:0002365,2.89e-28,31;UBERON:0002330,2.89e-28,31;UBERON:0002368,7.17e-25,35;UBERON:0003929,1.51e-22,54;UBERON:0005172,1.60e-22,54;UBERON:0005173,1.60e-22,54;UBERON:0002417,4.44e-20,60;UBERON:0000916,4.44e-20,60;UBERON:0000949,5.09e-19,45;UBERON:0002530,3.95e-17,59;UBERON:0005911,3.44e-14,82;UBERON:0005177,3.87e-11,101;UBERON:0004921,7.51e-11,118;UBERON:0009569,7.49e-10,112;UBERON:0001041,4.15e-09,87;UBERON:0005256,7.45e-09,122;UBERON:0003104,7.76e-09,160;UBERON:0009142,7.76e-09,160;UBERON:0001007,1.92e-08,145;UBERON:0001555,1.92e-08,145;UBERON:0007026,1.92e-08,145;UBERON:0000490,2.70e-08,148;UBERON:0004119,1.88e-07,160;UBERON:0000925,1.88e-07,160;UBERON:0006595,1.88e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3775226345338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,614.76191888588,271.260311803025,245.768601179464,0,55.3447973444011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77976734060731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,163.216962449992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,163.339494347712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51932747854276,0,0,0,0,0,0,0,0,0,7.75466196876175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,0,0,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.85381197895741,0,0,0,38.4372795210801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0.134366944973453,0,37.2787038487852,107.302694302439,103.349486409983,116.742937955448,0,0,0,0,0,0,0,0,0,0,0,10.4811590707934,5.4028225779048,0,0,0,0,0,0,0,0,0,0,0,0,0,267.897483163535,169.608817807643,0,0,0.342173675768659,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.45120521581504,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p1@PROC | |||
}} |
Revision as of 05:19, 21 January 2014
Short description: | p1@PROC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PROC_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000234071, ENST00000419985, ENST00000429925, ENST00000442644, ENST00000453608, ENST00000474030, ENST00000537436, uc002tok.2, uc002tol.2, uc010yzi.1, uc010yzj.1, uc010yzk.1_5end |
EntrezGene: | PROC |
HGNC: | 9451 |
UniProt: | P04070F2Z2A0E7EVH6E7ENR9B4DPQ7F5H880 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.29e-37 | 12 |
endodermal cell | 1.35e-11 | 58 |