FFCP PHASE1:Hg19::chr20:61298207..61298221,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-131bp_to_ENST00000411824_5end | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_2_at_ENST00000411824_5end | |||
|id=chr20:61298207..61298221,- | |||
|ontology_enrichment_celltype=CL:0002178!2.60e-15!3;CL:0000181!1.73e-14!12;CL:0000417!1.73e-14!12;CL:0000668!1.73e-14!12;CL:0000414!1.73e-14!12;CL:0000412!1.73e-14!12;CL:0000182!1.73e-14!12;CL:0002566!8.64e-12!1 | |||
|ontology_enrichment_celltype_v019=CL:0002178;2.39e-66;3!CL:0002251;2.29e-11;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.39e-66,3;CL:0002251,2.29e-11,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!1.20e-22!2;DOID:5662!1.19e-11!1;DOID:305!1.55e-10!106;DOID:3119!1.89e-07!14;DOID:0050687!2.18e-07!143;DOID:299!4.47e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.55e-98;2!DOID:3119;1.43e-15;14!DOID:299;2.15e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.55e-98,2;DOID:3119,1.43e-15,14;DOID:299,2.15e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0009497!4.37e-20!25;UBERON:0000015!4.37e-20!25;UBERON:0002423!4.37e-20!25;UBERON:0006235!4.37e-20!25;UBERON:0004161!4.37e-20!25;UBERON:0008835!5.00e-17!22;UBERON:0003894!5.00e-17!22;UBERON:0009854!2.84e-16!23;UBERON:0007499!6.08e-15!25;UBERON:0009856!2.36e-14!26;UBERON:0002294!4.16e-14!7;UBERON:0001173!4.16e-14!7;UBERON:0004912!4.16e-14!7;UBERON:0001041!9.24e-14!98;UBERON:0004913!5.05e-12!1;UBERON:0003703!5.05e-12!1;UBERON:0001174!5.05e-12!1;UBERON:0004914!5.05e-12!1;UBERON:0001831!5.62e-12!1;UBERON:0001567!5.62e-12!1;UBERON:0008801!5.62e-12!1;UBERON:0000077!8.82e-12!130;UBERON:0004921!9.00e-12!129;UBERON:0004185!9.00e-12!129;UBERON:0002038!1.47e-11!1;UBERON:0009661!1.47e-11!1;UBERON:0002394!1.47e-11!4;UBERON:0003928!1.47e-11!4;UBERON:0001007!3.78e-11!155;UBERON:0001555!3.78e-11!155;UBERON:0007026!3.78e-11!155;UBERON:0004119!4.70e-10!169;UBERON:0000925!4.70e-10!169;UBERON:0006595!4.70e-10!169;UBERON:0005911!2.88e-09!82;UBERON:0002107!3.16e-09!19;UBERON:0006925!3.16e-09!19;UBERON:0008836!3.16e-09!19;UBERON:0003929!6.01e-09!54;UBERON:0000466!1.65e-08!126;UBERON:0002365!1.66e-08!31;UBERON:0002330!1.66e-08!31;UBERON:0005057!8.80e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.48e-40;5!UBERON:0010039;1.48e-40;5!UBERON:0001041;1.43e-15;14!UBERON:0005409;4.42e-10;22!UBERON:0004921;2.32e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,5.22e-26,8;UBERON:0010039,5.22e-26,8;UBERON:0005409,4.34e-09,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945398187686684,0.741742725430498,0.943649613958588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896436696664224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591424344868181,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.1249478847868,0.853425474875886,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@ENST00000411824 | |||
}} |
Revision as of 12:40, 21 January 2014
Short description: | p2@ENST00000411824 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000411824_5end |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | -131bp_to_ENST00000411824_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.39e-66 | 3 |
epithelial cell of alimentary canal | 2.29e-11 | 20 |
Ontology term | p-value | n |
---|---|---|
stomach | 5.22e-26 | 8 |
food storage organ | 5.22e-26 | 8 |
gastrointestinal system | 4.34e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.55e-98 | 2 |
gastrointestinal system cancer | 1.43e-15 | 14 |
adenocarcinoma | 2.15e-09 | 25 |