FFCP PHASE1:Hg19::chr21:44957893..44957903,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C362 | |||
|description=CAGE_peak_at_chr21:44957893..44957903,- | |||
|id=chr21:44957893..44957903,- | |||
|ontology_enrichment_celltype=CL:0002076!2.11e-29!43;CL:0000223!2.31e-26!59;CL:0002368!5.29e-26!13;CL:0002621!4.41e-18!3;CL:0002166!4.93e-18!3;CL:0000066!1.20e-14!254;CL:0002251!3.60e-12!21;CL:0000220!1.48e-11!246;CL:0002321!2.04e-11!248;CL:0002159!9.11e-11!13;CL:0002202!4.80e-10!9;CL:0002632!4.80e-10!9;CL:0000240!8.36e-09!6;CL:0000311!8.36e-09!6;CL:0000079!8.36e-09!6;CL:0000237!8.36e-09!6;CL:0000036!8.36e-09!6;CL:0000357!8.36e-09!6;CL:0000114!8.36e-09!6;CL:0000068!1.83e-08!3;CL:0000069!1.83e-08!3;CL:0000307!1.83e-08!3;CL:0000377!1.83e-08!3;CL:0002328!3.17e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002621;4.54e-74;3!CL:0002166;4.28e-34;3!CL:0002159;1.23e-16;14!CL:0002251;7.97e-12;20!CL:0002076;6.50e-11;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,4.55e-74,3;CL:0002166,5.51e-34,3;CL:0002159,1.26e-16,14;CL:0002251,7.97e-12,20;CL:0000223,6.25e-11,58;CL:0002076,6.58e-10,42;CL:0002077,3.08e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3151!5.89e-07!1;DOID:3149!5.89e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!4.41e-18!3;UBERON:0001708!1.18e-13!4;UBERON:0001704!1.18e-13!4;UBERON:0001004!2.54e-10!72;UBERON:0002090!2.97e-09!6;UBERON:0004119!1.39e-08!169;UBERON:0000925!1.39e-08!169;UBERON:0006595!1.39e-08!169;UBERON:0004815!3.17e-08!3;UBERON:0002031!3.17e-08!3;UBERON:0001828!4.68e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;4.54e-74;3!UBERON:0003929;2.57e-32;7!UBERON:0003350;2.17e-28;8!UBERON:0001828;2.17e-28;8!UBERON:0001708;7.17e-26;4!UBERON:0008895;7.17e-26;4!UBERON:0011159;6.32e-21;5!UBERON:0000486;3.29e-19;12!UBERON:0003729;8.57e-18;13!UBERON:0010371;1.31e-13;31!UBERON:0000161;2.07e-12;19!UBERON:0000166;2.07e-12;19!UBERON:0000344;7.97e-12;20!UBERON:0004807;8.20e-11;22!UBERON:0011137;4.52e-10;11!UBERON:0010323;4.52e-10;11!UBERON:0000165;1.23e-08;28!UBERON:0000075;3.29e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.55e-74,3;UBERON:0003350,2.17e-28,8;UBERON:0001828,2.17e-28,8;UBERON:0001708,8.66e-26,4;UBERON:0008895,8.66e-26,4;UBERON:0011159,7.35e-21,5;UBERON:0003729,8.57e-18,13;UBERON:0010188,1.44e-17,6;UBERON:0002539,1.44e-17,6;UBERON:0008816,1.44e-17,6;UBERON:0000344,7.97e-12,20;UBERON:0000033,2.54e-11,56;UBERON:0000166,8.20e-11,22;UBERON:0000153,3.00e-10,62;UBERON:0007811,3.00e-10,62;UBERON:0010323,4.83e-10,11;UBERON:0003102,4.18e-09,99;UBERON:0004807,1.23e-08,28;UBERON:0000165,2.33e-08,29;UBERON:0000930,2.33e-08,29;UBERON:0011137,4.34e-08,14;UBERON:0003929,9.60e-08,54;UBERON:0000075,3.44e-07,16;UBERON:0000161,7.52e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51239109112286,2.18196896472668,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42675371031213,0,0.201057944823262,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74935335947108,2.01578553838631,0.850650583454319,0,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.576570202095319,3.82838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr21:44957893..44957903,- | |||
}} |
Revision as of 14:04, 21 January 2014
Short description: | p@chr21:44957893..44957903, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:44957893..44957903, - |
Coexpression cluster: | C362_Small_Mallassezderived_Urothelial_Gingival_Prostate_Keratinocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 4.55e-74 | 3 |
epithelial cell of Malassez | 5.51e-34 | 3 |
general ecto-epithelial cell | 1.26e-16 | 14 |
epithelial cell of alimentary canal | 7.97e-12 | 20 |
endodermal cell | 6.25e-11 | 58 |
endo-epithelial cell | 6.58e-10 | 42 |
ecto-epithelial cell | 3.08e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 4.55e-74 | 3 |
epithelium of mucosa | 2.17e-28 | 8 |
gingiva | 2.17e-28 | 8 |
jaw skeleton | 8.66e-26 | 4 |
splanchnocranium | 8.66e-26 | 4 |
primary subdivision of cranial skeletal system | 7.35e-21 | 5 |
mouth mucosa | 8.57e-18 | 13 |
protuberance | 1.44e-17 | 6 |
pharyngeal arch | 1.44e-17 | 6 |
embryonic head | 1.44e-17 | 6 |
mucosa | 7.97e-12 | 20 |
head | 2.54e-11 | 56 |
oral opening | 8.20e-11 | 22 |
anterior region of body | 3.00e-10 | 62 |
craniocervical region | 3.00e-10 | 62 |
cranial skeletal system | 4.83e-10 | 11 |
surface structure | 4.18e-09 | 99 |
respiratory system epithelium | 1.23e-08 | 28 |
mouth | 2.33e-08 | 29 |
stomodeum | 2.33e-08 | 29 |
axial skeletal system | 4.34e-08 | 14 |
gut epithelium | 9.60e-08 | 54 |
subdivision of skeletal system | 3.44e-07 | 16 |
orifice | 7.52e-07 | 36 |