FFCP PHASE1:Hg19::chr3:123332535..123332554,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=4638 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7590 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=194bp_to_AK025953_5end | |||
|coexpression_cluster_id=C2715 | |||
|description=CAGE_peak_12_at_MYLK_5end | |||
|id=chr3:123332535..123332554,- | |||
|ontology_enrichment_celltype=CL:0000057!5.49e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002622;1.02e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,1.57e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005795;3.54e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.85e-08;3!DOID:127;1.85e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.01e-08,3;DOID:127,2.01e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000475!4.40e-09!365;UBERON:0007023!5.00e-09!115;UBERON:0005156!2.21e-08!59;UBERON:0000990!2.21e-08!59;UBERON:0000062!4.50e-08!511;UBERON:0003101!6.38e-07!22;UBERON:0000079!6.38e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003101;7.82e-13;22!UBERON:0000079;7.82e-13;22!UBERON:0005904;1.50e-10;4!UBERON:0003937;1.54e-08;12!UBERON:0005399;1.54e-08;12!UBERON:0006947;2.25e-08;3!UBERON:0004054;2.25e-08;3!UBERON:0004175;1.08e-07;21!UBERON:0003135;1.51e-07;11!UBERON:0005156;1.97e-07;59!UBERON:0000990;1.97e-07;59!UBERON:0002367;7.53e-07;11!UBERON:0010147;7.53e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003101,1.09e-12,22;UBERON:0000079,1.09e-12,22;UBERON:0005156,9.43e-12,59;UBERON:0000990,9.43e-12,59;UBERON:0005904,1.45e-10,4;UBERON:0004122,1.45e-08,15;UBERON:0003937,1.88e-08,12;UBERON:0005399,1.88e-08,12;UBERON:0006947,2.06e-08,3;UBERON:0004054,2.06e-08,3;UBERON:0001046,4.44e-08,19;UBERON:0003064,6.20e-08,28;UBERON:0003135,1.72e-07,11;UBERON:0003133,2.08e-07,48;UBERON:0000162,4.67e-07,14;UBERON:0001353,4.67e-07,14;UBERON:0000163,4.67e-07,14;UBERON:0006866,4.67e-07,14;UBERON:0000164,4.67e-07,14;UBERON:0000931,4.67e-07,14;UBERON:0002367,9.17e-07,11;UBERON:0010147,9.17e-07,11;UBERON:0009846,9.17e-07,11;UBERON:0003353,9.17e-07,11;UBERON:0004902,9.17e-07,11;UBERON:0003820,9.17e-07,11;UBERON:0009847,9.17e-07,11 | |||
|phase1_expression=0.726713517082227,2.78330681058278,0.986680828671798,3.00219895059391,7.15137751083661,2.61701557230111,10.1319951267324,0,0,0.245733936501509,0,0,0,0.123766352960047,0,1.34465029290355,1.20538905604795,0.730310090387373,0.975865597581014,0,0.408001382488506,0.313454721478088,0.286235987131057,0.684372125364421,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,1.73815822752988,0,0,0.0945348171640679,0,0.614843499851882,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0.379891534993739,0.397227542439656,0.286836620748814,0.354668382198357,0,0,0.49333509683432,0,0,0,0,0.576175924479999,0,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0,2.37600571456411,2.22540236350701,0,0,0.168336113954066,0,0,0.438977620880838,0.919463387397059,0.45071417671979,0,2.33206526395521,2.98980344345994,0.847727604638247,0.600182192168805,0.618315175430633,2.31876486041066,1.8611685633159,0.168776332241266,0.68205903612839,1.00973509697646,0.184099797284599,0,1.06502877754984,1.71278566986988,1.3564847384839,0.193260853163297,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,1.92972281457866,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0.185176890317059,0,0,0,0.231860809950154,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,3.98907174877306,4.16029747645464,0,0,0,0.714889968290738,0,0,0,0,0,0,0,1.69954085009497,0,0,0,0.958499421966331,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,1.03985430765404,0.535286966391485,0.630809660135739,1.40569697991256,0,0,0,0,0,0.955719759148911,0,0,0,0,0,0,0,0.30239029332968,0,0.460385919864187,1.40330047216537,0.128139149255701,0.511707249066704,1.93024705372329,1.48418066444991,0,0,0.246381468041427,0.519254429183621,0.232420756919918,0.120859449591622,0.40101294060657,0,1.03333003348146,2.73136752010076,5.90059867317409,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0.831076008928724,0.447749509444357,0,0,0,0.656029291399411,0.325378394664303,0.206082023295445,0.183138929636687,0.247528499761764,0,0.650060246036521,3.21367859688319,0,0,0,0.275673144969061,0.214840489736547,0.145016693914229,0.170453254832202,0.267096106940212,0,0,0,0,0.464845549297286,0.62962469366128,0,0,0,0,0.18532421910392,0,0.372158369359667,0.316379424718726,0.38126038784765,0,1.28381696410176,0,0,0.719489830333259,0.274537029736055,0.706874414074119,0,0,0,0,0,0,2.59349831675173,1.1312434556297,1.13008116620243,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0,0,0,0.354761064070598,0.422215270595328,1.31717957183961,0,0,0,0,0,0.564862804660675,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.23874448473769,0.296964680832639,0,0,0.140669416410513,0.111308705022906,0,0,1.79323189425963,1.10513566212459,0,0.511343412510774,0,5.59871257791253,0,0,0,4.63624006493588,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0,0.520874984799877,0,0,0,0,0.295547618953547,0,0,0.83654246567162,2.46240827212151,0.227884111694002,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0.216388639742091,0,0.707660516026713,6.11030144933625,0,0,0,0.337005664903385,0,0.234264445725339,0,0,0,3.55125962564451,2.41981432097328,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,4.89234671077684,0,0,0,0,3.58859361007152,0,0.90392296312213,1.37041924646751,0,0,0,0.0801588202515337,2.77488893161158,0,0,0,0,0,0,0,0.271808412147228,0.209205692624666,0.101998217636322,0,0,0.136905378891993,0,0.859530882839914,0,0.279282401272254,1.3749625440701,0,0,0,0,0.0671834724867263,1.80149941771202,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.472834243795189,0.0524545881349981,0,0,0,0,0,0,3.25799761052228,9.50643640321395,4.24563568142232,0,0,0,0,0.293104467356165,0,0.258565912723101,0.13223260174269,0,0,0.213574825135389,0.314408610199332,1.24271716604159,1.48849806543585,0,0,0,0,0.2506898940227,0,0,0,0,0.854183854313742,0.1251909307065,1.14681839138014,0.221858103073705,0.248385611765534,0,0,0,0.285465333544967,0.470531639396343,0,0,0,0.233713309847224,0,0.947015026375446,1.0062716070103,2.66943366478961,0,0,0.15543720058278,0.147855149989634,0.159296767163702,0,0.776314784381297,0,0.797525143673985,3.65221543268214,0.601030435988874,0.761610424337591,0.406870733204662,1.09109195521536,0.64446334225493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| |||
|short_description=p12@MYLK | |||
}} |
Revision as of 20:59, 21 January 2014
Short description: | p12@MYLK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_12_at_MYLK_5end |
Coexpression cluster: | C2715_smooth_penis_rectum_seminal_uterus_umbilical_colon |
Association with transcript: | 194bp_to_AK025953_5end |
EntrezGene: | MYLK |
HGNC: | 7590 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 1.57e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
male organism | 1.09e-12 | 22 |
male reproductive system | 1.09e-12 | 22 |
reproductive structure | 9.43e-12 | 59 |
reproductive system | 9.43e-12 | 59 |
duct of male reproductive system | 1.45e-10 | 4 |
genitourinary system | 1.45e-08 | 15 |
sex gland | 1.88e-08 | 12 |
male reproductive gland | 1.88e-08 | 12 |
male genital duct | 2.06e-08 | 3 |
internal male genitalia | 2.06e-08 | 3 |
hindgut | 4.44e-08 | 19 |
intermediate mesoderm | 6.20e-08 | 28 |
male reproductive organ | 1.72e-07 | 11 |
reproductive organ | 2.08e-07 | 48 |
cloaca | 4.67e-07 | 14 |
anal region | 4.67e-07 | 14 |
embryonic cloaca | 4.67e-07 | 14 |
terminal part of digestive tract | 4.67e-07 | 14 |
primitive urogenital sinus | 4.67e-07 | 14 |
proctodeum | 4.67e-07 | 14 |
prostate gland | 9.17e-07 | 11 |
male accessory sex gland | 9.17e-07 | 11 |
embryonic cloacal epithelium | 9.17e-07 | 11 |
epithelium of hindgut | 9.17e-07 | 11 |
urogenital sinus epithelium | 9.17e-07 | 11 |
prostate bud | 9.17e-07 | 11 |
prostate field | 9.17e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.01e-08 | 3 |
leiomyoma | 2.01e-08 | 3 |