FFCP PHASE1:Hg19::chr3:168991187..168991198,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C133 | |||
|description=CAGE_peak_at_chr3:168991187..168991198,- | |||
|id=chr3:168991187..168991198,- | |||
|ontology_enrichment_celltype=CL:0002563!1.37e-09!4;CL:0000313!2.67e-09!1 | |||
|ontology_enrichment_celltype_v019=CL:0002563;5.15e-19;4!CL:0002253;2.99e-10;2!CL:0002076;6.97e-08;42!CL:0002231;2.05e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.29e-19,4;CL:0002253,2.72e-10,2;CL:0000223,6.50e-08,58;CL:0002231,2.19e-07,3;CL:0002076,2.94e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.91e-19;1 | |||
|ontology_enrichment_disease=DOID:299!1.32e-11!25;DOID:2152!2.67e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.43e-10;2!DOID:299;3.64e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.43e-10,2;DOID:299,3.57e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0000160!1.60e-28!27;UBERON:0000059!3.08e-27!11;UBERON:0005409!1.90e-26!35;UBERON:0001155!1.87e-23!9;UBERON:0004907!7.80e-16!5;UBERON:0004921!2.98e-10!129;UBERON:0004185!2.98e-10!129;UBERON:0001154!7.50e-10!1;UBERON:0001153!7.50e-10!1;UBERON:0001242!1.37e-09!4;UBERON:0001262!1.37e-09!4;UBERON:0004786!1.37e-09!4;UBERON:0004808!1.37e-09!4;UBERON:0001277!1.37e-09!4;UBERON:0001007!1.77e-09!155;UBERON:0001555!1.77e-09!155;UBERON:0007026!1.77e-09!155;UBERON:0001052!2.08e-09!4;UBERON:0004911!2.67e-09!1;UBERON:0004119!1.77e-08!169;UBERON:0000925!1.77e-08!169;UBERON:0006595!1.77e-08!169;UBERON:0003350!7.71e-08!5;UBERON:0001046!2.34e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.79e-48;17!UBERON:0005409;1.13e-37;22!UBERON:0001155;5.20e-32;9!UBERON:0000059;2.74e-26;11!UBERON:0004921;5.74e-23;33!UBERON:0001154;3.91e-19;1!UBERON:0001153;3.91e-19;1!UBERON:0009854;3.91e-19;1!UBERON:0001242;5.15e-19;4!UBERON:0001262;5.15e-19;4!UBERON:0004786;5.15e-19;4!UBERON:0004808;5.15e-19;4!UBERON:0001277;5.15e-19;4!UBERON:0002108;3.12e-15;4!UBERON:0004907;3.12e-15;5!UBERON:0000485;2.69e-11;7!UBERON:0003929;2.69e-11;7!UBERON:0001555;4.15e-10;54!UBERON:0003350;5.29e-10;8!UBERON:0001007;3.37e-08;81!UBERON:0002114;2.97e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.66e-48,17;UBERON:0005409,2.51e-33,25;UBERON:0001155,4.26e-32,9;UBERON:0000059,2.33e-26,11;UBERON:0001154,3.91e-19,1;UBERON:0001153,3.91e-19,1;UBERON:0001045,3.91e-19,1;UBERON:0001242,4.29e-19,4;UBERON:0001262,4.29e-19,4;UBERON:0004786,4.29e-19,4;UBERON:0004808,4.29e-19,4;UBERON:0001277,4.29e-19,4;UBERON:0004907,2.90e-15,5;UBERON:0002108,3.88e-15,4;UBERON:0004921,1.14e-11,118;UBERON:0003350,4.84e-10,8;UBERON:0001007,2.16e-09,145;UBERON:0001555,2.16e-09,145;UBERON:0007026,2.16e-09,145;UBERON:0001046,3.73e-09,19;UBERON:0000485,5.00e-09,9;UBERON:0004119,1.87e-08,160;UBERON:0000925,1.87e-08,160;UBERON:0006595,1.87e-08,160;UBERON:0002114,3.35e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30459534900897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23008073570678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69623685720729,0,1.99052386215701,2.83064206410685,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26914319044689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0.576361668616424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95282444544246,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,30.7233170955319,0,0,0,0,0,0,0,0,0,0,1.54348316215889,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:168991187..168991198,- | |||
}} |
Revision as of 22:29, 21 January 2014
Short description: | p@chr3:168991187..168991198, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:168991187..168991198, - |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.29e-19 | 4 |
epithelial cell of large intestine | 2.72e-10 | 2 |
endodermal cell | 6.50e-08 | 58 |
epithelial cell of prostate | 2.19e-07 | 3 |
endo-epithelial cell | 2.94e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.66e-48 | 17 |
gastrointestinal system | 2.51e-33 | 25 |
colon | 4.26e-32 | 9 |
large intestine | 2.33e-26 | 11 |
vermiform appendix | 3.91e-19 | 1 |
caecum | 3.91e-19 | 1 |
midgut | 3.91e-19 | 1 |
intestinal mucosa | 4.29e-19 | 4 |
wall of intestine | 4.29e-19 | 4 |
gastrointestinal system mucosa | 4.29e-19 | 4 |
gastrointestinal system epithelium | 4.29e-19 | 4 |
intestinal epithelium | 4.29e-19 | 4 |
lower digestive tract | 2.90e-15 | 5 |
small intestine | 3.88e-15 | 4 |
subdivision of digestive tract | 1.14e-11 | 118 |
epithelium of mucosa | 4.84e-10 | 8 |
digestive system | 2.16e-09 | 145 |
digestive tract | 2.16e-09 | 145 |
primitive gut | 2.16e-09 | 145 |
hindgut | 3.73e-09 | 19 |
simple columnar epithelium | 5.00e-09 | 9 |
endoderm-derived structure | 1.87e-08 | 160 |
endoderm | 1.87e-08 | 160 |
presumptive endoderm | 1.87e-08 | 160 |
duodenum | 3.35e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.43e-10 | 2 |
adenocarcinoma | 3.57e-07 | 25 |