FFCP PHASE1:Hg19::chr3:186739722..186739731,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6480 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10860 | |||
|TSSclassifier=strong | |||
|UniProt=P15907 | |||
|association_with_transcript=57bp_to_NM_003032,uc003frd.2_5end | |||
|coexpression_cluster_id=C995 | |||
|description=CAGE_peak_13_at_ST6GAL1_5end | |||
|id=chr3:186739722..186739731,+ | |||
|ontology_enrichment_celltype=CL:0000945!3.57e-37!24;CL:0000826!3.57e-37!24;CL:0000236!2.06e-21!14;CL:0000542!8.79e-15!53;CL:0000051!8.79e-15!53;CL:0000838!1.43e-13!52 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.93e-94;24!CL:0000236;4.93e-43;13!CL:0000542;8.87e-29;53!CL:0000946;5.59e-09;1!CL:0000786;5.59e-09;1!CL:0000785;1.10e-08;1!CL:0000819;1.10e-08;1!CL:0002087;4.22e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.87e-94,24;CL:0000826,2.87e-94,24;CL:0000236,1.27e-49,14;CL:0000542,8.09e-46,53;CL:0000051,8.09e-46,53;CL:0000838,1.01e-41,52;CL:0002087,5.55e-19,115;CL:0000785,5.56e-16,2;CL:0000955,5.56e-16,2;CL:0000818,5.56e-16,2;CL:0000954,5.56e-16,2;CL:0000816,5.56e-16,2;CL:0002031,5.73e-16,120;CL:0000738,1.64e-15,136;CL:0002032,1.49e-12,161;CL:0000837,1.49e-12,161;CL:0000037,7.00e-12,168;CL:0000988,4.28e-11,177;CL:0000817,5.87e-11,3;CL:0000946,5.59e-09,1;CL:0000786,5.59e-09,1;CL:0000980,5.59e-09,1;CL:0000819,1.02e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000051;8.87e-29;53!CL:0000954;5.98e-16;2!UBERON:0004872;1.21e-09;7!UBERON:0008801;2.95e-08;1 | |||
|ontology_enrichment_disease=DOID:0060058!4.23e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.06e-12;10!DOID:0060073;1.10e-08;1!DOID:8675;1.10e-08;1!DOID:12603;1.10e-08;1!DOID:630;1.71e-08;1!DOID:0050177;1.71e-08;1!DOID:0050427;1.71e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.81e-12,10;DOID:12603,8.78e-09,1;DOID:0060073,1.02e-08,1;DOID:8675,1.02e-08,1;DOID:630,1.84e-08,1;DOID:0050177,1.84e-08,1;DOID:0050427,1.84e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.60e-30!115;UBERON:0001049!8.17e-14!57;UBERON:0005068!8.17e-14!57;UBERON:0006241!8.17e-14!57;UBERON:0007135!8.17e-14!57;UBERON:0002780!2.02e-11!41;UBERON:0001890!2.02e-11!41;UBERON:0006240!2.02e-11!41;UBERON:0003080!4.83e-11!42;UBERON:0002616!1.09e-10!59;UBERON:0001893!8.26e-10!34;UBERON:0001869!3.95e-09!32;UBERON:0000955!4.83e-09!69;UBERON:0006238!4.83e-09!69;UBERON:0002791!8.18e-09!33;UBERON:0005743!1.85e-08!86;UBERON:0001017!2.22e-08!82;UBERON:0002020!2.44e-08!34;UBERON:0003528!2.44e-08!34;UBERON:0003075!7.76e-08!86;UBERON:0007284!7.76e-08!86;UBERON:0002346!3.16e-07!90;UBERON:0000073!4.34e-07!94;UBERON:0001016!4.34e-07!94;UBERON:0003056!4.77e-07!61;UBERON:0001950!6.75e-07!20;UBERON:0002106!7.62e-07!3;UBERON:0004854!7.62e-07!3;UBERON:0009034!7.62e-07!3;UBERON:0002095!7.62e-07!3;UBERON:0004782!7.62e-07!3;UBERON:0003281!7.62e-07!3;UBERON:0009664!7.62e-07!3;UBERON:0002296!7.62e-07!3;UBERON:0005602!7.62e-07!3;UBERON:0001179!7.62e-07!3;UBERON:0006293!7.62e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;3.47e-10;3!UBERON:0002372;2.95e-08;1!UBERON:0001831;2.95e-08;1!UBERON:0001961;2.95e-08;1!UBERON:0001744;2.95e-08;1!UBERON:0001042;2.95e-08;1!UBERON:0001567;2.95e-08;1!UBERON:0001735;2.95e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.01e-10,3;UBERON:0004854,3.01e-10,3;UBERON:0009034,3.01e-10,3;UBERON:0002095,3.01e-10,3;UBERON:0004782,3.01e-10,3;UBERON:0003281,3.01e-10,3;UBERON:0009664,3.01e-10,3;UBERON:0002296,3.01e-10,3;UBERON:0005602,3.01e-10,3;UBERON:0001179,3.01e-10,3;UBERON:0006293,3.01e-10,3;UBERON:0002372,2.64e-08,1;UBERON:0001961,2.64e-08,1;UBERON:0001744,2.64e-08,1;UBERON:0001735,2.64e-08,1;UBERON:0001831,3.79e-08,1;UBERON:0001567,3.79e-08,1;UBERON:0008801,3.79e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.79416738629103,6.23964479819588,5.66717625458491,0,0,0.154816123316076,0,0,0,3.64095842727418,2.13253848731132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,1.75996244461323,2.73069305631066,0.889509253863555,0.853460445133014,1.60158394814405,3.4485146397269,3.30522436392431,0,1.1384259382189,2.93618594685469,4.20500550937752,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,1.70894156152249,0.476463550915578,0.822724546172388,0,1.08006287447623,0.79312517629427,0,0,0,3.71606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0,3.20020494198781,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0.539209063845416,0,0.702793337176017,3.46664099509765,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.189932387867636,2.54216797555244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.242998226632099,0,0.709251365692784,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,6.82038550933017,0,0,0,0,0,0,0,0.122026264901963,0,0,0.443716206147409,0.869349641179368,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.319267718114302,0,0,0.276629009856872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0.0634158101939068,0,1.09651553371436,0.496211178389294,0,0,0,0,0,0,0.354809480650555,8.41208109157188,0,0.271878931907327,0.197318320688547,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.594092800654172,0,0,1.78569444161722,1.28915775947154,0.0999411559249289,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.20686599172379,0,0,0,0.0620747142958579,0,0.12729431655633,1.61693751166575,0,0,1.68380132536469,0.0717222053926763,0,0,0,0,0,0,0,0,0,3.01910690386539,2.24397944612263 | |||
|short_description=p13@ST6GAL1 | |||
}} |
Revision as of 23:09, 21 January 2014
Short description: | p13@ST6GAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ST6GAL1_5end |
Coexpression cluster: | C995_B_plasma_lymphoma_xeroderma_acute_Burkitt_b |
Association with transcript: | 57bp_to_NM_003032, uc003frd.2_5end |
EntrezGene: | ST6GAL1 |
HGNC: | 10860 |
UniProt: | P15907 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.87e-94 | 24 |
pro-B cell | 2.87e-94 | 24 |
B cell | 1.27e-49 | 14 |
lymphocyte | 8.09e-46 | 53 |
common lymphoid progenitor | 8.09e-46 | 53 |
lymphoid lineage restricted progenitor cell | 1.01e-41 | 52 |
nongranular leukocyte | 5.55e-19 | 115 |
mature B cell | 5.56e-16 | 2 |
pre-B-II cell | 5.56e-16 | 2 |
transitional stage B cell | 5.56e-16 | 2 |
small pre-B-II cell | 5.56e-16 | 2 |
immature B cell | 5.56e-16 | 2 |
hematopoietic lineage restricted progenitor cell | 5.73e-16 | 120 |
leukocyte | 1.64e-15 | 136 |
hematopoietic oligopotent progenitor cell | 1.49e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.49e-12 | 161 |
hematopoietic stem cell | 7.00e-12 | 168 |
hematopoietic cell | 4.28e-11 | 177 |
precursor B cell | 5.87e-11 | 3 |
antibody secreting cell | 5.59e-09 | 1 |
plasma cell | 5.59e-09 | 1 |
plasmablast | 5.59e-09 | 1 |
B-1 B cell | 1.02e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.01e-10 | 3 |
gastrointestinal system mesentery | 3.01e-10 | 3 |
stomach region | 3.01e-10 | 3 |
mesentery | 3.01e-10 | 3 |
gastrointestinal system serosa | 3.01e-10 | 3 |
mesentery of stomach | 3.01e-10 | 3 |
gut mesentery | 3.01e-10 | 3 |
dorsal mesentery | 3.01e-10 | 3 |
dorsal mesogastrium | 3.01e-10 | 3 |
peritoneal cavity | 3.01e-10 | 3 |
spleen primordium | 3.01e-10 | 3 |
tonsil | 2.64e-08 | 1 |
mucosa-associated lymphoid tissue | 2.64e-08 | 1 |
lymphoid tissue | 2.64e-08 | 1 |
tonsillar ring | 2.64e-08 | 1 |
parotid gland | 3.79e-08 | 1 |
cheek | 3.79e-08 | 1 |
parotid gland primordium | 3.79e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.81e-12 | 10 |
acute leukemia | 8.78e-09 | 1 |
lymphatic system cancer | 1.02e-08 | 1 |
lymphosarcoma | 1.02e-08 | 1 |
genetic disease | 1.84e-08 | 1 |
monogenic disease | 1.84e-08 | 1 |
xeroderma pigmentosum | 1.84e-08 | 1 |