FFCP PHASE1:Hg19::chr4:40194621..40194632,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=399 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=686 | |||
|TSSclassifier=strong | |||
|UniProt=D6R8Z1 | |||
|association_with_transcript=11bp_to_ENST00000508513_5end | |||
|coexpression_cluster_id=C1183 | |||
|description=CAGE_peak_17_at_RHOH_5end | |||
|id=chr4:40194621..40194632,+ | |||
|ontology_enrichment_celltype=CL:0000945!5.16e-78!24;CL:0000826!5.16e-78!24;CL:0000236!1.42e-46!14;CL:0000542!8.04e-38!53;CL:0000051!8.04e-38!53;CL:0000838!3.22e-34!52;CL:0002087!1.48e-16!119;CL:0002031!6.59e-14!124;CL:0000738!1.58e-13!140;CL:0002032!6.41e-11!165;CL:0000837!6.41e-11!165;CL:0000037!2.52e-10!172;CL:0000566!2.52e-10!172;CL:0000817!1.17e-09!3;CL:0000988!1.48e-09!182;CL:0000819!5.40e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.37e-40;24!CL:0000236;7.49e-38;13!CL:0000542;4.74e-18;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.78e-40,24;CL:0000826,4.78e-40,24;CL:0000236,2.98e-35,14;CL:0000542,1.62e-23,53;CL:0000051,1.62e-23,53;CL:0000838,1.89e-18,52;CL:0002087,1.41e-10,115;CL:0000738,6.86e-09,136;CL:0002031,8.73e-08,120;CL:0002032,1.91e-07,161;CL:0000837,1.91e-07,161;CL:0000037,4.07e-07,168;CL:0000988,9.89e-07,177 | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.12e-21;1!CL:0000051;4.74e-18;53 | |||
|ontology_enrichment_disease=DOID:0060058!4.11e-17!10;DOID:12603!2.90e-08!1;DOID:630!3.58e-08!1;DOID:0050177!3.58e-08!1;DOID:0050427!3.58e-08!1;DOID:0060073!5.40e-08!1;DOID:8675!5.40e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:12603;6.98e-21;1!DOID:0060058;9.77e-19;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,7.72e-21,1;DOID:0060058,1.01e-18,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!2.24e-20!3;UBERON:0004854!2.24e-20!3;UBERON:0009034!2.24e-20!3;UBERON:0002095!2.24e-20!3;UBERON:0004782!2.24e-20!3;UBERON:0003281!2.24e-20!3;UBERON:0009664!2.24e-20!3;UBERON:0002296!2.24e-20!3;UBERON:0005602!2.24e-20!3;UBERON:0001179!2.24e-20!3;UBERON:0006293!2.24e-20!3;UBERON:0004177!3.68e-15!7;UBERON:0001154!2.35e-08!1;UBERON:0001153!2.35e-08!1;UBERON:0002372!4.71e-08!1;UBERON:0001961!4.71e-08!1;UBERON:0001744!4.71e-08!1;UBERON:0001735!4.71e-08!1;UBERON:0000945!5.68e-08!8;UBERON:0010039!5.68e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;3.12e-21;1!UBERON:0001153;3.12e-21;1!UBERON:0009854;3.12e-21;1!UBERON:0002106;4.52e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,4.22e-21,1;UBERON:0001153,4.22e-21,1;UBERON:0001045,4.22e-21,1;UBERON:0002106,4.52e-08,3;UBERON:0004854,4.52e-08,3;UBERON:0009034,4.52e-08,3;UBERON:0002095,4.52e-08,3;UBERON:0004782,4.52e-08,3;UBERON:0003281,4.52e-08,3;UBERON:0009664,4.52e-08,3;UBERON:0002296,4.52e-08,3;UBERON:0005602,4.52e-08,3;UBERON:0001179,4.52e-08,3;UBERON:0006293,4.52e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,0.410502947249729,0.787107813136792,0,0,0,0,0,0,2.55641761914995,3.12772311472327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,1.77901850772711,2.98711155796555,0.400395987036012,1.14950487990897,2.64417949113945,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0,0,0,1.48642540100575,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21027132424918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,5.99646935549574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0.606168477131288,0.215166616178029,0,0,0,0,0,0,0,0,0,0.603821380773079,0.961705476909699 | |||
|short_description=p17@RHOH | |||
}} |
Revision as of 00:47, 22 January 2014
Short description: | p17@RHOH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_RHOH_5end |
Coexpression cluster: | C1183_splenic_CD19_Burkitt_acute_xeroderma_B_appendix |
Association with transcript: | 11bp_to_ENST00000508513_5end |
EntrezGene: | RHOH |
HGNC: | 686 |
UniProt: | D6R8Z1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.78e-40 | 24 |
pro-B cell | 4.78e-40 | 24 |
B cell | 2.98e-35 | 14 |
lymphocyte | 1.62e-23 | 53 |
common lymphoid progenitor | 1.62e-23 | 53 |
lymphoid lineage restricted progenitor cell | 1.89e-18 | 52 |
nongranular leukocyte | 1.41e-10 | 115 |
leukocyte | 6.86e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 8.73e-08 | 120 |
hematopoietic oligopotent progenitor cell | 1.91e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.91e-07 | 161 |
hematopoietic stem cell | 4.07e-07 | 168 |
hematopoietic cell | 9.89e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 4.22e-21 | 1 |
caecum | 4.22e-21 | 1 |
midgut | 4.22e-21 | 1 |
spleen | 4.52e-08 | 3 |
gastrointestinal system mesentery | 4.52e-08 | 3 |
stomach region | 4.52e-08 | 3 |
mesentery | 4.52e-08 | 3 |
gastrointestinal system serosa | 4.52e-08 | 3 |
mesentery of stomach | 4.52e-08 | 3 |
gut mesentery | 4.52e-08 | 3 |
dorsal mesentery | 4.52e-08 | 3 |
dorsal mesogastrium | 4.52e-08 | 3 |
peritoneal cavity | 4.52e-08 | 3 |
spleen primordium | 4.52e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 7.72e-21 | 1 |
lymphoma | 1.01e-18 | 10 |