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FFCP PHASE1:Hg19::chr4:103265698..103265709,-: Difference between revisions

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{{FFCP|DPIdataset=robustDPI|EntrezGene=64116|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=20862|TSSclassifier=W|UniProt=|association_with_transcript=109bp_to_CU680230,DQ892212,DQ895407_5end|description=CAGE_peak_16_at_SLC39A8_5end|id=chr4:103265698..103265709,-|ontology_enrichment_celltype=CL:0002009!3.12e-09!65;CL:0002194!5.75e-09!63;CL:0000576!5.75e-09!63;CL:0000040!5.75e-09!63;CL:0000559!5.75e-09!63;CL:0002031!6.46e-09!124;CL:0002087!1.51e-08!119;CL:0000860!3.09e-08!45;CL:0002032!3.88e-08!165;CL:0000837!3.88e-08!165;CL:0000839!4.86e-08!70;CL:0000557!8.77e-08!71;CL:0000037!2.87e-07!172;CL:0000566!2.87e-07!172;CL:0000763!5.21e-07!112;CL:0000049!5.21e-07!112;CL:0000988!5.99e-07!182|ontology_enrichment_celltype_v019=CL:0000306;1.23e-12;4!CL:0002222;1.23e-12;4!CL:0002224;1.23e-12;4!CL:0000860;1.39e-08;33!CL:0002057;1.39e-08;33|ontology_enrichment_celltype_v019_2=CL:0000306,1.47e-12,4;CL:0002222,1.47e-12,4;CL:0002224,1.47e-12,4;CL:0000860,6.00e-07,42;CL:0002057,6.00e-07,42|ontology_enrichment_development_v019=UBERON:0008801;1.93e-13;1!UBERON:0006298;5.06e-13;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001829;1.14e-24;2!UBERON:0001831;1.93e-13;1!UBERON:0001567;1.93e-13;1!UBERON:0001736;5.06e-13;1!UBERON:0002171;5.06e-13;1!UBERON:0006518;5.06e-13;1!UBERON:0008949;5.06e-13;1!UBERON:0000101;5.06e-13;1!UBERON:0002167;5.06e-13;1!UBERON:0010077;1.23e-12;4!UBERON:0005389;1.23e-12;4!UBERON:0000484;1.23e-12;4!UBERON:0000965;1.23e-12;4!UBERON:0001803;1.23e-12;4!UBERON:0001044;7.32e-09;6!UBERON:0003293;7.32e-09;6!UBERON:0003294;7.32e-09;6!UBERON:0010047;7.32e-09;6!UBERON:0003408;7.32e-09;6!UBERON:0000167;7.32e-09;6!UBERON:0004089;2.35e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001829,6.29e-25,2;UBERON:0001831,2.06e-13,1;UBERON:0001567,2.06e-13,1;UBERON:0008801,2.06e-13,1;UBERON:0001736,2.62e-13,1;UBERON:0006298,2.62e-13,1;UBERON:0002171,6.82e-13,1;UBERON:0006518,6.82e-13,1;UBERON:0008949,6.82e-13,1;UBERON:0000101,6.82e-13,1;UBERON:0002167,6.82e-13,1;UBERON:0010077,1.47e-12,4;UBERON:0005389,1.47e-12,4;UBERON:0000484,1.47e-12,4;UBERON:0002546,1.47e-12,4;UBERON:0000965,1.47e-12,4;UBERON:0001803,1.47e-12,4;UBERON:0003073,1.47e-12,4;UBERON:0005426,1.47e-12,4;UBERON:0001044,6.02e-09,6;UBERON:0003293,6.02e-09,6;UBERON:0003294,6.02e-09,6;UBERON:0010047,6.02e-09,6;UBERON:0000167,6.02e-09,6;UBERON:0004089,2.43e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0.464858073811369,0.411167888021826,0.929119112685311,0,0,0.236482229888585,0.344745680736619,0,1.35426486594342,0.188242339542605,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0,0,0,2.61188314765726,1.13477044938228,1.86846674698672,0,0,0.217188844705117,1.81619850790011,0.736555271975129,0.949387162322653,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.25618263945135,0.390178042679635,0.493313713811028,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0,0.196468613246569,0,0,0.324547393654683,0.348259474598534,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.132529768321485,0.232387885739037,0.310983165046111,0.252320850875628,0,1.56449532329816,0,0,0.464367928031979,0,0,0.337169380156203,0,0,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0.234004265139238,0.743155811443641,0,0,0,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50719688529793,0,0.599837947092342,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0.321707842287215,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0.626719583092093,0,0,0.321176150207399,0,0,0,0.307240764308458,0,0,0,0,0,0.540911356951966,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0.291604613383254,0.34724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{{FFCP
|DHSsupport=supported
|DPIdataset=robust
|EntrezGene=64116
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding
|HGNC=20862
|TSSclassifier=weak
|UniProt=
|association_with_transcript=109bp_to_CU680230,DQ892212,DQ895407_5end
|description=CAGE_peak_16_at_SLC39A8_5end
|id=chr4:103265698..103265709,-
|ontology_enrichment_celltype=CL:0002009!3.12e-09!65;CL:0002194!5.75e-09!63;CL:0000576!5.75e-09!63;CL:0000040!5.75e-09!63;CL:0000559!5.75e-09!63;CL:0002031!6.46e-09!124;CL:0002087!1.51e-08!119;CL:0000860!3.09e-08!45;CL:0002032!3.88e-08!165;CL:0000837!3.88e-08!165;CL:0000839!4.86e-08!70;CL:0000557!8.77e-08!71;CL:0000037!2.87e-07!172;CL:0000566!2.87e-07!172;CL:0000763!5.21e-07!112;CL:0000049!5.21e-07!112;CL:0000988!5.99e-07!182
|ontology_enrichment_celltype_v019=CL:0000306;1.23e-12;4!CL:0002222;1.23e-12;4!CL:0002224;1.23e-12;4!CL:0000860;1.39e-08;33!CL:0002057;1.39e-08;33
|ontology_enrichment_celltype_v019_2=CL:0000306,1.47e-12,4;CL:0002222,1.47e-12,4;CL:0002224,1.47e-12,4;CL:0000860,6.00e-07,42;CL:0002057,6.00e-07,42
|ontology_enrichment_development_v019=UBERON:0008801;1.93e-13;1!UBERON:0006298;5.06e-13;1
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019=UBERON:0001829;1.14e-24;2!UBERON:0001831;1.93e-13;1!UBERON:0001567;1.93e-13;1!UBERON:0001736;5.06e-13;1!UBERON:0002171;5.06e-13;1!UBERON:0006518;5.06e-13;1!UBERON:0008949;5.06e-13;1!UBERON:0000101;5.06e-13;1!UBERON:0002167;5.06e-13;1!UBERON:0010077;1.23e-12;4!UBERON:0005389;1.23e-12;4!UBERON:0000484;1.23e-12;4!UBERON:0000965;1.23e-12;4!UBERON:0001803;1.23e-12;4!UBERON:0001044;7.32e-09;6!UBERON:0003293;7.32e-09;6!UBERON:0003294;7.32e-09;6!UBERON:0010047;7.32e-09;6!UBERON:0003408;7.32e-09;6!UBERON:0000167;7.32e-09;6!UBERON:0004089;2.35e-07;2
|ontology_enrichment_uberon_v019_2=UBERON:0001829,6.29e-25,2;UBERON:0001831,2.06e-13,1;UBERON:0001567,2.06e-13,1;UBERON:0008801,2.06e-13,1;UBERON:0001736,2.62e-13,1;UBERON:0006298,2.62e-13,1;UBERON:0002171,6.82e-13,1;UBERON:0006518,6.82e-13,1;UBERON:0008949,6.82e-13,1;UBERON:0000101,6.82e-13,1;UBERON:0002167,6.82e-13,1;UBERON:0010077,1.47e-12,4;UBERON:0005389,1.47e-12,4;UBERON:0000484,1.47e-12,4;UBERON:0002546,1.47e-12,4;UBERON:0000965,1.47e-12,4;UBERON:0001803,1.47e-12,4;UBERON:0003073,1.47e-12,4;UBERON:0005426,1.47e-12,4;UBERON:0001044,6.02e-09,6;UBERON:0003293,6.02e-09,6;UBERON:0003294,6.02e-09,6;UBERON:0010047,6.02e-09,6;UBERON:0000167,6.02e-09,6;UBERON:0004089,2.43e-07,2
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|short_description=p16@SLC39A8
}}

Revision as of 02:29, 22 January 2014

Short description:p16@SLC39A8
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): No
DHS support(Yes/No): Yes
Description: CAGE_peak_16_at_SLC39A8_5end
Coexpression cluster:NA
Association with transcript: 109bp_to_CU680230, DQ892212, DQ895407_5end
EntrezGene:SLC39A8
HGNC: 20862
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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