FFCP PHASE1:Hg19::chr4:106892267..106892271,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1031 | |||
|description=CAGE_peak_at_chr4:106892267..106892271,+ | |||
|id=chr4:106892267..106892271,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002097;6.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,5.94e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.30e-13;5 | |||
|ontology_enrichment_disease=DOID:305!2.15e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3493;6.93e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,6.42e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.28e-11!115;UBERON:0001737!1.58e-11!9;UBERON:0004921!1.66e-10!129;UBERON:0004185!1.66e-10!129;UBERON:0001007!2.44e-10!155;UBERON:0001555!2.44e-10!155;UBERON:0007026!2.44e-10!155;UBERON:0000481!2.04e-09!347;UBERON:0004119!2.56e-09!169;UBERON:0000925!2.56e-09!169;UBERON:0006595!2.56e-09!169;UBERON:0008947!7.70e-07!38;UBERON:0003258!7.70e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;6.47e-17;1!UBERON:0006518;6.47e-17;1!UBERON:0008949;6.47e-17;1!UBERON:0000101;6.47e-17;1!UBERON:0002167;6.47e-17;1!UBERON:0002046;2.30e-13;5!UBERON:0000341;3.43e-09;2!UBERON:0003127;6.93e-09;2!UBERON:0001905;6.93e-09;2!UBERON:0002757;6.93e-09;2!UBERON:0010134;6.93e-09;2!UBERON:0005408;6.93e-09;2!UBERON:0001899;6.93e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,5.53e-17,1;UBERON:0006518,5.53e-17,1;UBERON:0008949,5.53e-17,1;UBERON:0000101,5.53e-17,1;UBERON:0002167,5.53e-17,1;UBERON:0002046,2.37e-13,5;UBERON:0004117,2.37e-13,5;UBERON:0007689,2.37e-13,5;UBERON:0007123,2.37e-13,5;UBERON:0003091,2.37e-13,5;UBERON:0000341,3.43e-09,2;UBERON:0003127,5.49e-09,2;UBERON:0001905,8.09e-09,2;UBERON:0002757,8.09e-09,2;UBERON:0010134,8.09e-09,2;UBERON:0005408,8.09e-09,2;UBERON:0001899,8.09e-09,2;UBERON:0002368,2.81e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0.236613600079688,1.01150814046861,0.723033089650446,0.441175890929576,0.435758888184812,0,0.808987848960987,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0.295547618953547,0.219385397153973,0,1.11538995422883,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0.442287822516696,3.05515072466813,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.640358984218058,0,0,0.114536596165916,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0.470284307407084,0,0,0,0.164831716762333,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0.213574825135389,0.628817220398664,3.31391244277756,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28664954824955,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0.756215088665154,0,0,0,0,0,0,0,0,0,0.397832444232549,0.0752103283492573,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0.766574565837572,1.07140367175657,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,0.171488009437418,0,0,0,0.444925607568277,0.39246546425257,0.157115589916002,1.12108865325516,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0.955538938977433,0,0,1.21917924982269,0,0.205325613712494,0,0,0,0.596852325484105,0,0.11294608203896,0,0.150962843566674,0.848915739187391,0.437119121007915,0,0,0,0.196308467114945,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0.286679166302903,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,9.28451282708587,0,0,0.224263725161227,2.60953348940476,3.03175783437329,0,0.684466602170562,0,0,1.33064142618405,0,0,0,0.0898252021065869,0,0.122241444182866,0.406896178315738,0,0,0.320568492303233 | |||
|short_description=p@chr4:106892267..106892271,+ | |||
}} |
Revision as of 02:37, 22 January 2014
Short description: | p@chr4:106892267..106892271, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:106892267..106892271, + |
Coexpression cluster: | C1031_throat_thyroid_skeletal_Adipocyte_trachea_bone_skin |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 5.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 5.53e-17 | 1 |
right lung lobe | 5.53e-17 | 1 |
lower lobe of lung | 5.53e-17 | 1 |
lobe of lung | 5.53e-17 | 1 |
right lung | 5.53e-17 | 1 |
thyroid gland | 2.37e-13 | 5 |
pharyngeal pouch | 2.37e-13 | 5 |
thyroid diverticulum | 2.37e-13 | 5 |
pharyngeal pouch 2 | 2.37e-13 | 5 |
thyroid primordium | 2.37e-13 | 5 |
throat | 3.43e-09 | 2 |
open tracheal system trachea | 5.49e-09 | 2 |
pineal body | 8.09e-09 | 2 |
regional part of epithalamus | 8.09e-09 | 2 |
secretory circumventricular organ | 8.09e-09 | 2 |
circumventricular organ | 8.09e-09 | 2 |
epithalamus | 8.09e-09 | 2 |
endocrine gland | 2.81e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 6.42e-09 | 2 |