FFCP PHASE1:Hg19::chr5:168272120..168272136,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11087 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-264bp_to_uc003mac.1_5end | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_12_at_SLIT3_5end | |||
|id=chr5:168272120..168272136,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;6.03e-60;5!CL:0002321;1.20e-20;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,1.06e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.89e-12;3!UBERON:0003057;2.89e-12;3 | |||
|ontology_enrichment_disease=DOID:114!7.45e-11!2;DOID:169!1.34e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:169;3.84e-50;6!DOID:171;1.68e-30;10!DOID:3095;2.38e-14;22!DOID:2994;2.38e-14;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,3.84e-50,6;DOID:171,1.68e-30,10;DOID:3095,2.38e-14,22;DOID:2994,2.38e-14,22 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.14e-35!57;UBERON:0005068!1.14e-35!57;UBERON:0006241!1.14e-35!57;UBERON:0007135!1.14e-35!57;UBERON:0000073!5.74e-31!94;UBERON:0001016!5.74e-31!94;UBERON:0003075!1.45e-29!86;UBERON:0007284!1.45e-29!86;UBERON:0002346!5.10e-28!90;UBERON:0002616!7.64e-28!59;UBERON:0002020!9.28e-28!34;UBERON:0003528!9.28e-28!34;UBERON:0007023!4.49e-27!115;UBERON:0005743!2.12e-26!86;UBERON:0001950!1.34e-25!20;UBERON:0001017!2.11e-25!82;UBERON:0000955!2.51e-25!69;UBERON:0006238!2.51e-25!69;UBERON:0002619!3.45e-23!22;UBERON:0001869!5.82e-22!32;UBERON:0002791!3.09e-21!33;UBERON:0001893!1.50e-20!34;UBERON:0000956!2.89e-20!25;UBERON:0000203!2.89e-20!25;UBERON:0003076!4.76e-20!15;UBERON:0003057!4.76e-20!15;UBERON:0002780!1.64e-19!41;UBERON:0001890!1.64e-19!41;UBERON:0006240!1.64e-19!41;UBERON:0003080!5.48e-19!42;UBERON:0004121!8.19e-18!169;UBERON:0000924!2.90e-17!173;UBERON:0006601!2.90e-17!173;UBERON:0000988!1.05e-15!3;UBERON:0002298!1.34e-15!8;UBERON:0000033!2.43e-15!123;UBERON:0000153!2.10e-14!129;UBERON:0007811!2.10e-14!129;UBERON:0004733!2.16e-14!12;UBERON:0002028!2.16e-14!12;UBERON:0007277!2.16e-14!12;UBERON:0003056!3.10e-14!61;UBERON:0004732!3.06e-13!13;UBERON:0000025!2.08e-12!194;UBERON:0002133!2.01e-11!2;UBERON:0002081!2.46e-11!2;UBERON:0002148!7.45e-11!2;UBERON:0009662!7.45e-11!2;UBERON:0000013!3.05e-10!5;UBERON:0002410!3.05e-10!5;UBERON:0001871!4.85e-10!7;UBERON:0000064!2.82e-09!219;UBERON:0002021!3.16e-09!5;UBERON:0001872!3.35e-09!5;UBERON:0002680!6.07e-09!9;UBERON:0001895!6.07e-09!9;UBERON:0010092!6.07e-09!9;UBERON:0002308!6.33e-09!9;UBERON:0000125!6.33e-09!9;UBERON:0004111!7.31e-09!241;UBERON:0007100!2.76e-08!27;UBERON:0000477!4.26e-08!286;UBERON:0003978!6.90e-08!3;UBERON:0009751!6.90e-08!3;UBERON:0000946!6.90e-08!3;UBERON:0002523!6.90e-08!3;UBERON:0005983!6.90e-08!3;UBERON:0002165!6.90e-08!3;UBERON:0002062!6.90e-08!3;UBERON:0007280!6.90e-08!3;UBERON:0004151!7.90e-08!3;UBERON:0001896!1.07e-07!3;UBERON:0005290!1.07e-07!3;UBERON:0010096!1.07e-07!3;UBERON:0002240!1.18e-07!3;UBERON:0006331!1.64e-07!3;UBERON:0000481!6.29e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;6.03e-60;5!UBERON:0002410;6.03e-60;5!UBERON:0000010;8.87e-34;8!UBERON:0002240;2.89e-12;3!UBERON:0005174;2.89e-12;3!UBERON:0002114;2.89e-12;2!UBERON:0001137;2.89e-12;3!UBERON:0002108;7.01e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,6.03e-60,5;UBERON:0002410,6.03e-60,5;UBERON:0000010,8.87e-34,8;UBERON:0002114,2.59e-12,2;UBERON:0002240,2.89e-12,3;UBERON:0005174,2.89e-12,3;UBERON:0001137,2.89e-12,3;UBERON:0001016,1.98e-09,89;UBERON:0002108,6.55e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,0.717873024576814,0.199679000498991,0.429226048136571,0.223171457441873,0.806201669840715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.332787154610557,0.620964029413834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5678388094587,29.5439983226908,0,11.7946409247375,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.319267718114302,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.815636795721981,0.0657727735628491,0,0,0,0.628462359664008,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0.196308467114945,0,1.2679671827502,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@SLIT3 | |||
}} |
Revision as of 08:55, 22 January 2014
Short description: | p12@SLIT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SLIT3_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | -264bp_to_uc003mac.1_5end |
EntrezGene: | SLIT3 |
HGNC: | 11087 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 1.06e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 6.03e-60 | 5 |
autonomic nervous system | 6.03e-60 | 5 |
peripheral nervous system | 8.87e-34 | 8 |
duodenum | 2.59e-12 | 2 |
spinal cord | 2.89e-12 | 3 |
dorsal region element | 2.89e-12 | 3 |
dorsum | 2.89e-12 | 3 |
nervous system | 1.98e-09 | 89 |
small intestine | 6.55e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 3.84e-50 | 6 |
neuroectodermal tumor | 1.68e-30 | 10 |
germ cell and embryonal cancer | 2.38e-14 | 22 |
germ cell cancer | 2.38e-14 | 22 |