FFCP PHASE1:Hg19::chr6:73935069..73935097,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=100129128 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37274 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=395bp_to_ENST00000471312_5end | |||
|coexpression_cluster_id=C196 | |||
|description=CAGE_peak_6_at_KHDC1L_5end | |||
|id=chr6:73935069..73935097,- | |||
|ontology_enrichment_celltype=CL:0000039!5.80e-65!7;CL:0000586!5.80e-65!7;CL:1000415!2.37e-15!2 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.28e-84;7!CL:0000586;1.28e-84;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.28e-84,7;CL:0000586,1.28e-84,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.10e-59;10!UBERON:0005564;1.10e-59;10 | |||
|ontology_enrichment_disease=DOID:8552!2.37e-29!1;DOID:3095!3.56e-21!22;DOID:2994!3.56e-21!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;7.08e-28;22!DOID:2994;7.08e-28;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.08e-28,22;DOID:2994,7.08e-28,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.15e-32!8;UBERON:0003135!5.23e-24!11;UBERON:0000991!5.82e-13!21;UBERON:0009196!5.82e-13!21;UBERON:0009117!5.82e-13!21;UBERON:0005564!5.82e-13!21;UBERON:0004176!2.09e-12!22;UBERON:0003101!2.09e-12!22;UBERON:0000079!2.09e-12!22;UBERON:0002110!1.09e-10!3;UBERON:0006242!1.09e-10!3;UBERON:0002323!2.16e-10!46;UBERON:0004458!8.77e-10!49;UBERON:0003886!1.05e-07!63;UBERON:0002553!5.66e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.11e-74;8!UBERON:0003135;2.16e-54;11!UBERON:0000991;3.84e-29;21!UBERON:0003101;7.08e-28;22!UBERON:0000079;7.08e-28;22!UBERON:0003133;6.93e-12;44!UBERON:0002323;6.93e-12;45!UBERON:0000922;5.58e-11;49!UBERON:0004458;2.05e-08;48!UBERON:0002553;2.07e-08;52!UBERON:0005156;7.28e-07;59!UBERON:0000990;7.28e-07;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.11e-74,8;UBERON:0003135,2.16e-54,11;UBERON:0000991,3.84e-29,21;UBERON:0009196,3.84e-29,21;UBERON:0009117,3.84e-29,21;UBERON:0005564,3.84e-29,21;UBERON:0004176,7.08e-28,22;UBERON:0003101,7.08e-28,22;UBERON:0000079,7.08e-28,22;UBERON:0002323,5.85e-14,46;UBERON:0003133,2.00e-13,48;UBERON:0004458,3.57e-13,49;UBERON:0003886,4.68e-12,54;UBERON:0005156,3.99e-11,59;UBERON:0000990,3.99e-11,59;UBERON:0002553,8.52e-11,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538545866458633,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.56960904096936,0,2.11358268930143,2.005660314339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@KHDC1L | |||
}} |
Revision as of 12:39, 22 January 2014
Short description: | p6@KHDC1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_KHDC1L_5end |
Coexpression cluster: | C196_testicular_iPS_H9_teratocarcinoma_HES3GFP_choriocarcinoma_endometrial |
Association with transcript: | 395bp_to_ENST00000471312_5end |
EntrezGene: | KHDC1L |
HGNC: | 37274 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.28e-84 | 7 |
germ cell | 1.28e-84 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 3.11e-74 | 8 |
male reproductive organ | 2.16e-54 | 11 |
gonad | 3.84e-29 | 21 |
indifferent external genitalia | 3.84e-29 | 21 |
indifferent gonad | 3.84e-29 | 21 |
gonad primordium | 3.84e-29 | 21 |
external genitalia | 7.08e-28 | 22 |
male organism | 7.08e-28 | 22 |
male reproductive system | 7.08e-28 | 22 |
body cavity | 5.85e-14 | 46 |
reproductive organ | 2.00e-13 | 48 |
body cavity or lining | 3.57e-13 | 49 |
body cavity precursor | 4.68e-12 | 54 |
reproductive structure | 3.99e-11 | 59 |
reproductive system | 3.99e-11 | 59 |
anatomical cavity | 8.52e-11 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.08e-28 | 22 |
germ cell cancer | 7.08e-28 | 22 |