FFCP PHASE1:Hg19::chr6:74104292..74104309,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1978 | |||
|description=CAGE_peak_at_chr6:74104292..74104309,- | |||
|id=chr6:74104292..74104309,- | |||
|ontology_enrichment_celltype=CL:0000039!4.49e-11!7;CL:0000586!4.49e-11!7;CL:1000415!3.71e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000039;9.85e-18;7!CL:0000586;9.85e-18;7!CL:0000082;8.29e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,8.30e-18,7;CL:0000586,8.30e-18,7;CL:0000082,8.63e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.90e-21;10!UBERON:0005564;1.90e-21;10 | |||
|ontology_enrichment_disease=DOID:0050687!7.74e-11!143;DOID:305!5.11e-09!106;DOID:5093!2.84e-07!4;DOID:1612!2.84e-07!4;DOID:3493!4.84e-07!2;DOID:3910!5.14e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:6193;9.36e-15;1!DOID:3095;5.57e-10;22!DOID:2994;5.57e-10;22!DOID:1324;1.73e-08;15!DOID:3493;3.82e-08;2!DOID:4468;4.23e-08;2!DOID:3350;5.01e-08;2!DOID:3910;5.01e-08;2!DOID:0050615;5.44e-08;16 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,8.17e-15,1;DOID:305,2.02e-11,106;DOID:3095,5.31e-10,22;DOID:2994,5.31e-10,22;DOID:0050687,5.48e-10,143;DOID:1324,1.82e-08,15;DOID:3493,3.82e-08,2;DOID:4468,4.09e-08,2;DOID:3350,4.69e-08,2;DOID:3910,5.02e-08,2;DOID:0050615,5.71e-08,16 | |||
|ontology_enrichment_uberon=UBERON:0002075!1.02e-14!18;UBERON:0000473!1.10e-13!8;UBERON:0002323!6.53e-13!46;UBERON:0004458!7.15e-12!49;UBERON:0000464!2.87e-11!104;UBERON:0001264!1.08e-10!10;UBERON:0003922!1.08e-10!10;UBERON:0003923!1.08e-10!10;UBERON:0003924!1.08e-10!10;UBERON:0003921!1.08e-10!10;UBERON:0000466!5.32e-10!126;UBERON:0003135!1.00e-09!11;UBERON:0001045!1.20e-09!11;UBERON:0002110!1.66e-09!3;UBERON:0006242!1.66e-09!3;UBERON:0003886!2.31e-08!63;UBERON:0002553!3.10e-08!70;UBERON:0002114!4.91e-08!12;UBERON:0004903!5.14e-07!2;UBERON:0002173!5.14e-07!2;UBERON:0002186!5.14e-07!2;UBERON:0002294!6.59e-07!7;UBERON:0001173!6.59e-07!7;UBERON:0004912!6.59e-07!7;UBERON:0002108!7.42e-07!14;UBERON:0004119!7.66e-07!169;UBERON:0000925!7.66e-07!169;UBERON:0006595!7.66e-07!169;UBERON:0000077!7.68e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.05e-26;8!UBERON:0003135;1.57e-19;11!UBERON:0003101;5.55e-15;22!UBERON:0000079;5.55e-15;22!UBERON:0001264;1.46e-12;10!UBERON:0002323;2.66e-11;45!UBERON:0000991;2.25e-10;21!UBERON:0004903;5.01e-08;2!UBERON:0002173;5.01e-08;2!UBERON:0002186;5.01e-08;2!UBERON:0002553;1.15e-07;52!UBERON:0002075;3.21e-07;18!UBERON:0004458;3.22e-07;48!UBERON:0000922;5.11e-07;49!UBERON:0004802;8.29e-07;19!UBERON:0000115;8.29e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.01e-26,8;UBERON:0003135,1.53e-19,11;UBERON:0003101,5.24e-15,22;UBERON:0000079,5.24e-15,22;UBERON:0002323,1.41e-13,46;UBERON:0004458,1.03e-12,49;UBERON:0001264,1.49e-12,10;UBERON:0003886,1.73e-11,54;UBERON:0000991,2.22e-10,21;UBERON:0009196,2.22e-10,21;UBERON:0009117,2.22e-10,21;UBERON:0005564,2.22e-10,21;UBERON:0002553,4.17e-10,61;UBERON:0004176,6.41e-10,22;UBERON:0004903,5.02e-08,2;UBERON:0002173,5.02e-08,2;UBERON:0002186,5.02e-08,2;UBERON:0002075,3.25e-07,18;UBERON:0004802,8.63e-07,19;UBERON:0000115,8.63e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40963376167696,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449341755736634,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0.455173793141999,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628303510868405,0.434589487688032,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,4.73375143661528,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,4.6525771089503,1.65495977937749,0.941798755221676,2.38944859545918,0,0,0,0,0,0,3.61170668190395,0,0,0,0,0,0,0,0,0,0.977756913674015,0.721429382263803,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422401346077626,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0.146552233678082,0,0,0,0,1.40963004463334,0.106787412567695,0,0,0,0,0,0,0,0,0,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0.889811221596536,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.911579868532147,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,0,0,0,0,0,0.20170506870352,0.781514011233092,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,1.89110145414349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,6.96866658668225,0.243835849964539,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,1.36410323371586,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,3.16870158694717,0,1.93778776509765,0,2.94063678511504,13.2874995824959,1.28823786971007,0.803892390468535,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:74104292..74104309,- | |||
}} |
Revision as of 12:39, 22 January 2014
Short description: | p@chr6:74104292..74104309, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:74104292..74104309, - |
Coexpression cluster: | C1978_testicular_epithelioid_embryonic_gall_signet_large_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 8.30e-18 | 7 |
germ cell | 8.30e-18 | 7 |
epithelial cell of lung | 8.63e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
testis | 1.01e-26 | 8 |
male reproductive organ | 1.53e-19 | 11 |
male organism | 5.24e-15 | 22 |
male reproductive system | 5.24e-15 | 22 |
body cavity | 1.41e-13 | 46 |
body cavity or lining | 1.03e-12 | 49 |
pancreas | 1.49e-12 | 10 |
body cavity precursor | 1.73e-11 | 54 |
gonad | 2.22e-10 | 21 |
indifferent external genitalia | 2.22e-10 | 21 |
indifferent gonad | 2.22e-10 | 21 |
gonad primordium | 2.22e-10 | 21 |
anatomical cavity | 4.17e-10 | 61 |
external genitalia | 6.41e-10 | 22 |
bronchoalveolar duct junction | 5.02e-08 | 2 |
alveolar duct | 5.02e-08 | 2 |
bronchiole | 5.02e-08 | 2 |
viscus | 3.25e-07 | 18 |
respiratory tract epithelium | 8.63e-07 | 19 |
lung epithelium | 8.63e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 8.17e-15 | 1 |
carcinoma | 2.02e-11 | 106 |
germ cell and embryonal cancer | 5.31e-10 | 22 |
germ cell cancer | 5.31e-10 | 22 |
cell type cancer | 5.48e-10 | 143 |
lung cancer | 1.82e-08 | 15 |
signet ring cell adenocarcinoma | 3.82e-08 | 2 |
clear cell adenocarcinoma | 4.09e-08 | 2 |
mesenchymal cell neoplasm | 4.69e-08 | 2 |
lung adenocarcinoma | 5.02e-08 | 2 |
respiratory system cancer | 5.71e-08 | 16 |