FFCP PHASE1:Hg19::chr7:29523451..29523464,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1124 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1944 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=19bp_to_ENST00000410098,uc011jzv.1_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_21_at_CHN2_5end | |||
|id=chr7:29523451..29523464,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.05e-15;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;2.26e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.61e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.59e-51!115;UBERON:0001049!2.94e-44!57;UBERON:0005068!2.94e-44!57;UBERON:0006241!2.94e-44!57;UBERON:0007135!2.94e-44!57;UBERON:0002616!1.33e-39!59;UBERON:0002780!1.46e-37!41;UBERON:0001890!1.46e-37!41;UBERON:0006240!1.46e-37!41;UBERON:0000955!3.20e-37!69;UBERON:0006238!3.20e-37!69;UBERON:0005743!1.04e-36!86;UBERON:0001017!1.33e-36!82;UBERON:0003080!1.57e-36!42;UBERON:0003075!1.25e-32!86;UBERON:0007284!1.25e-32!86;UBERON:0000073!2.08e-32!94;UBERON:0001016!2.08e-32!94;UBERON:0001893!7.16e-31!34;UBERON:0002346!8.59e-31!90;UBERON:0002791!1.66e-28!33;UBERON:0002020!2.54e-27!34;UBERON:0003528!2.54e-27!34;UBERON:0001869!3.87e-26!32;UBERON:0003056!2.09e-25!61;UBERON:0000033!1.39e-21!123;UBERON:0000153!3.55e-20!129;UBERON:0007811!3.55e-20!129;UBERON:0002619!7.03e-20!22;UBERON:0001950!6.52e-19!20;UBERON:0000025!7.72e-19!194;UBERON:0000956!3.18e-17!25;UBERON:0000203!3.18e-17!25;UBERON:0004121!1.93e-16!169;UBERON:0000924!7.53e-16!173;UBERON:0006601!7.53e-16!173;UBERON:0004111!5.58e-15!241;UBERON:0000200!1.79e-13!6;UBERON:0000477!1.89e-12!286;UBERON:0000483!3.28e-12!309;UBERON:0002308!3.91e-12!9;UBERON:0000125!3.91e-12!9;UBERON:0000119!5.55e-12!312;UBERON:0009663!2.43e-11!7;UBERON:0002771!1.30e-10!3;UBERON:0002298!1.20e-09!8;UBERON:0003076!5.19e-09!15;UBERON:0003057!5.19e-09!15;UBERON:0002420!9.86e-09!9;UBERON:0007245!9.86e-09!9;UBERON:0010009!9.86e-09!9;UBERON:0010011!9.86e-09!9;UBERON:0000454!9.86e-09!9;UBERON:0004733!1.34e-08!12;UBERON:0002028!1.34e-08!12;UBERON:0007277!1.34e-08!12;UBERON:0000062!2.28e-08!511;UBERON:0001905!4.65e-08!2;UBERON:0002757!4.65e-08!2;UBERON:0010134!4.65e-08!2;UBERON:0002784!4.65e-08!2;UBERON:0005408!4.65e-08!2;UBERON:0001899!4.65e-08!2;UBERON:0001894!4.98e-08!7;UBERON:0006222!4.98e-08!7;UBERON:0000475!5.90e-08!365;UBERON:0004732!6.98e-08!13;UBERON:0001875!1.13e-07!2;UBERON:0006514!1.13e-07!2;UBERON:0000922!1.49e-07!612;UBERON:0000923!3.41e-07!604;UBERON:0005291!3.41e-07!604;UBERON:0006598!3.41e-07!604;UBERON:0002532!3.41e-07!604;UBERON:0002050!3.70e-07!605;UBERON:0005423!3.70e-07!605;UBERON:0000064!4.90e-07!219;UBERON:0000481!5.56e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.13e-57;2!UBERON:0002757;1.13e-57;2!UBERON:0010134;1.13e-57;2!UBERON:0005408;1.13e-57;2!UBERON:0001899;1.13e-57;2!UBERON:0003296;1.78e-29;4!UBERON:0010133;1.78e-29;4!UBERON:0002784;1.78e-29;4!UBERON:0002038;2.37e-29;1!UBERON:0009661;2.37e-29;1!UBERON:0002950;2.37e-29;1!UBERON:0001891;2.37e-29;1!UBERON:0001894;2.46e-17;7!UBERON:0002780;6.98e-09;41!UBERON:0001890;6.98e-09;41!UBERON:0002108;6.04e-07;4!UBERON:0001872;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.13e-57,2;UBERON:0002757,1.13e-57,2;UBERON:0010134,1.13e-57,2;UBERON:0005408,1.13e-57,2;UBERON:0001899,1.13e-57,2;UBERON:0003296,1.78e-29,4;UBERON:0010133,1.78e-29,4;UBERON:0002784,1.78e-29,4;UBERON:0002038,2.37e-29,1;UBERON:0009661,2.37e-29,1;UBERON:0002950,2.37e-29,1;UBERON:0001891,2.37e-29,1;UBERON:0009616,2.37e-29,1;UBERON:0010286,2.37e-29,1;UBERON:0001894,2.46e-17,7;UBERON:0006222,2.46e-17,7;UBERON:0002780,2.46e-11,41;UBERON:0001890,2.46e-11,41;UBERON:0003080,2.46e-11,41;UBERON:0006240,2.46e-11,41;UBERON:0007023,3.44e-09,114;UBERON:0000073,6.41e-09,53;UBERON:0002616,6.41e-09,53;UBERON:0001049,1.79e-08,56;UBERON:0005068,1.79e-08,56;UBERON:0006241,1.79e-08,56;UBERON:0007135,1.79e-08,56;UBERON:0003056,8.01e-08,61;UBERON:0000955,5.66e-07,68;UBERON:0006238,5.66e-07,68;UBERON:0001872,5.70e-07,5;UBERON:0002108,6.39e-07,4 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.74214478529481,0,0,0.61221999997337,0,0,0,0,0,0,0,0,0,0,0.442317039724898,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0.741412462787447,0,0.937057782901357,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.958337652243951,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0.157566364614447,0.247247575143499,0.337017719270924,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.876336514945499,0,0.221858103073705,0.434674820589684,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0.319267718114302,0.41023272848151,0,0.414943514785307,0.161475645631851,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0.742913430802341,0,1.65349437200947,0.570742291745161,0,0,0,0,0,2.67850917939143,14.4602000554094,0,0,0,0,0,0.815636795721981,0.328863867814245,0,0,0.39246546425257,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,1.09940516745429,0.452888530700021,1.15761237161917,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,1.43339583151451,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.724030971033267,0,0,0,0,0,0.12729431655633,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p21@CHN2 | |||
}} |
Revision as of 16:18, 22 January 2014
Short description: | p21@CHN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_CHN2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 19bp_to_ENST00000410098, uc011jzv.1_5end |
EntrezGene: | CHN2 |
HGNC: | 1944 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.13e-57 | 2 |
regional part of epithalamus | 1.13e-57 | 2 |
secretory circumventricular organ | 1.13e-57 | 2 |
circumventricular organ | 1.13e-57 | 2 |
epithalamus | 1.13e-57 | 2 |
gland of diencephalon | 1.78e-29 | 4 |
neuroendocrine gland | 1.78e-29 | 4 |
regional part of diencephalon | 1.78e-29 | 4 |
substantia nigra | 2.37e-29 | 1 |
midbrain nucleus | 2.37e-29 | 1 |
regional part of midbrain | 2.37e-29 | 1 |
midbrain | 2.37e-29 | 1 |
presumptive midbrain | 2.37e-29 | 1 |
midbrain neural tube | 2.37e-29 | 1 |
diencephalon | 2.46e-17 | 7 |
future diencephalon | 2.46e-17 | 7 |
regional part of forebrain | 2.46e-11 | 41 |
forebrain | 2.46e-11 | 41 |
anterior neural tube | 2.46e-11 | 41 |
future forebrain | 2.46e-11 | 41 |
adult organism | 3.44e-09 | 114 |
regional part of nervous system | 6.41e-09 | 53 |
regional part of brain | 6.41e-09 | 53 |
neural tube | 1.79e-08 | 56 |
neural rod | 1.79e-08 | 56 |
future spinal cord | 1.79e-08 | 56 |
neural keel | 1.79e-08 | 56 |
pre-chordal neural plate | 8.01e-08 | 61 |
brain | 5.66e-07 | 68 |
future brain | 5.66e-07 | 68 |
parietal lobe | 5.70e-07 | 5 |
small intestine | 6.39e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.61e-08 | 4 |