FFCP PHASE1:Hg19::chr7:29603594..29603599,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222171 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22310 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IV56,A4D1A1 | |||
|association_with_transcript=167bp_to_ENST00000319694,NM_175887,uc003tac.1_5end | |||
|description=CAGE_peak_11_at_PRR15_5end | |||
|id=chr7:29603594..29603599,+ | |||
|ontology_enrichment_celltype=CL:0000349!5.86e-07!3;CL:0002577!5.86e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002577;4.22e-43;3!CL:0002536;1.66e-29;2!CL:0000349;9.28e-19;19!CL:0000511;1.92e-15;1!CL:0002625;1.92e-15;1!CL:0000216;1.92e-15;1!CL:0002554;1.34e-08;2!CL:0002549;2.23e-08;2!CL:0002583;2.23e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,2.21e-43,3;CL:0002536,2.96e-29,2;CL:0000349,9.12e-19,19;CL:0000511,1.34e-15,1;CL:0002625,1.34e-15,1;CL:0000216,1.34e-15,1;CL:0002554,1.39e-08,2;CL:0002583,2.15e-08,2;CL:0002549,2.48e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.34e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.23e-14!14;UBERON:0000158!3.23e-14!14;UBERON:0000478!5.38e-10!24;UBERON:0003124!1.82e-09!7;UBERON:0005284!4.35e-09!5;UBERON:0001987!1.70e-08!4;UBERON:0004340!1.70e-08!4;UBERON:0004871!4.29e-08!8;UBERON:0002200!2.39e-07!11;UBERON:0006876!2.39e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.55e-32;4!UBERON:0001301;6.92e-16;1!UBERON:0001136;1.92e-15;1!UBERON:0001343;1.92e-15;1!UBERON:0004910;1.92e-15;1!UBERON:0004813;1.92e-15;1!UBERON:0005904;2.75e-15;4!UBERON:0000478;7.29e-15;24!UBERON:0000305;3.88e-09;7!UBERON:0003127;2.23e-08;2!UBERON:0005629;2.23e-08;2!UBERON:0005358;2.23e-08;2!UBERON:0004909;2.23e-08;2!UBERON:0001886;2.23e-08;2!UBERON:0004086;2.23e-08;2!UBERON:0005282;2.23e-08;2!UBERON:0005281;2.23e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,9.55e-33,4;UBERON:0004340,9.55e-33,4;UBERON:0005631,1.98e-25,14;UBERON:0000158,1.98e-25,14;UBERON:0003124,4.93e-19,7;UBERON:0004871,1.34e-16,8;UBERON:0001301,5.56e-16,1;UBERON:0001136,1.34e-15,1;UBERON:0001343,1.34e-15,1;UBERON:0004910,1.34e-15,1;UBERON:0005154,1.34e-15,1;UBERON:0005295,1.34e-15,1;UBERON:0004813,1.34e-15,1;UBERON:0005297,1.34e-15,1;UBERON:0005294,1.34e-15,1;UBERON:0010141,1.34e-15,1;UBERON:0005891,1.34e-15,1;UBERON:0005904,2.07e-15,4;UBERON:0000478,7.19e-15,24;UBERON:0004175,1.66e-09,25;UBERON:0000305,4.57e-09,7;UBERON:0004909,1.86e-08,2;UBERON:0005629,2.48e-08,2;UBERON:0005358,2.48e-08,2;UBERON:0001886,2.48e-08,2;UBERON:0004086,2.48e-08,2;UBERON:0005282,2.48e-08,2;UBERON:0005281,2.48e-08,2;UBERON:0003127,2.87e-08,2;UBERON:0006554,1.23e-07,47;UBERON:0001008,1.78e-07,48;UBERON:0004923,1.80e-07,66;UBERON:0003133,1.81e-07,48 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,1.09220686065086,2.11013582582763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,0,0,0,0,0,0,0,0,0.196468613246569,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0.302714855289863,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,2.15585442544872,0,0,0,0,0,0,0.226864366320042,0,0,0.211931901159562,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0,0.70445216541493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,2.42502057157008,1.66435439510497,1.20956117331872,0.744323423456331,0,0.561320188866147,0,0,0.482561763430822,0,0.154209693802656,1.24293207719189,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,1.66215201785745,0,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0.372158369359667,0.316379424718726,0.38126038784765,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0.35667105148125,0,0,0,0,0.699869440489966,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437299999980979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,2.62090002363045,0,0.0967563312890851,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0.19980960958213,0.864542502924636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.315222829196793,0.209818352539992,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0.228840068396924,0.151230923763239,0.466311601748341,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0,0,0,0.226705925512272,0,0,0,0.617602894321944,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0.118193840883968,0,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0.121917924982269,0,0,0,0,0.233939463462106,0,0,0.5647304101948,0,0,0.385870790539723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0.218531143927391,0,0,0,0.18378979906969,0,0.151557396436479,0,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0,0,0,1.00411087549747,0.332660356546013,0.0814032686109745,0,0,0.0898252021065869,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p11@PRR15 | |||
}} |
Revision as of 16:19, 22 January 2014
Short description: | p11@PRR15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PRR15_5end |
Coexpression cluster: | NA |
Association with transcript: | 167bp_to_ENST00000319694, NM_175887, uc003tac.1_5end |
EntrezGene: | PRR15 |
HGNC: | 22310 |
UniProt: | Q8IV56A4D1A1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 2.21e-43 | 3 |
amniotic epithelial cell | 2.96e-29 | 2 |
extraembryonic cell | 9.12e-19 | 19 |
androgen binding protein secreting cell | 1.34e-15 | 1 |
seminiferous tubule epithelial cell | 1.34e-15 | 1 |
Sertoli cell | 1.34e-15 | 1 |
fibroblast of lymphatic vessel | 1.39e-08 | 2 |
subcutaneous preadipocyte | 2.15e-08 | 2 |
fibroblast of choroid plexus | 2.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
placenta | 9.55e-33 | 4 |
allantois | 9.55e-33 | 4 |
extraembryonic membrane | 1.98e-25 | 14 |
membranous layer | 1.98e-25 | 14 |
chorion | 4.93e-19 | 7 |
somatic layer of lateral plate mesoderm | 1.34e-16 | 8 |
epididymis | 5.56e-16 | 1 |
mesothelium | 1.34e-15 | 1 |
seminiferous tubule of testis | 1.34e-15 | 1 |
epithelium of male gonad | 1.34e-15 | 1 |
epithelial cord | 1.34e-15 | 1 |
sex cord | 1.34e-15 | 1 |
seminiferous tubule epithelium | 1.34e-15 | 1 |
testis sex cord | 1.34e-15 | 1 |
genital ridge | 1.34e-15 | 1 |
primitive sex cord of indifferent gonad | 1.34e-15 | 1 |
coelomic epithelium | 1.34e-15 | 1 |
duct of male reproductive system | 2.07e-15 | 4 |
extraembryonic structure | 7.19e-15 | 24 |
internal genitalia | 1.66e-09 | 25 |
amnion | 4.57e-09 | 7 |
epithelium of gonad | 1.86e-08 | 2 |
vascular plexus | 2.48e-08 | 2 |
ventricle of nervous system | 2.48e-08 | 2 |
choroid plexus | 2.48e-08 | 2 |
brain ventricle | 2.48e-08 | 2 |
ventricular system of brain | 2.48e-08 | 2 |
ventricular system of central nervous system | 2.48e-08 | 2 |
open tracheal system trachea | 2.87e-08 | 2 |
urinary system structure | 1.23e-07 | 47 |
renal system | 1.78e-07 | 48 |
organ component layer | 1.80e-07 | 66 |
reproductive organ | 1.81e-07 | 48 |