FFCP PHASE1:Hg19::chr7:34797827..34797851,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=404744 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=32bp_to_ENST00000358772,ENST00000439852,ENST00000537560,ENST00000544556,NR_033664,NR_033665,uc003teb.1,uc010kwo.1,uc010kwp.1_5end | |||
|coexpression_cluster_id=C1140 | |||
|description=CAGE_peak_1_at_AAA1_5end | |||
|id=chr7:34797827..34797851,- | |||
|ontology_enrichment_celltype=CL:0000313!5.43e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.65e-12;12!CL:0002535;5.71e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.75e-12,12;CL:0002535,5.94e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.11e-22;11!UBERON:0009497;2.95e-19;13!UBERON:0003104;2.36e-12;31!UBERON:0001041;1.62e-08;30 | |||
|ontology_enrichment_disease=DOID:0060060!3.10e-08!1;DOID:0060061!3.10e-08!1;DOID:8691!3.10e-08!1;DOID:2152!5.43e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!3.33e-08!1;UBERON:0004911!5.43e-08!1;UBERON:0005172!4.47e-07!55;UBERON:0005173!4.47e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.74e-13;19!UBERON:0006925;2.74e-13;19!UBERON:0002108;4.52e-13;4!UBERON:0002423;3.60e-10;25!UBERON:0006955;5.71e-09;2!UBERON:0004801;5.71e-09;2!UBERON:0002365;1.62e-07;31!UBERON:0002330;1.62e-07;31!UBERON:0002368;1.63e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.79e-13,19;UBERON:0006925,2.79e-13,19;UBERON:0008836,2.79e-13,19;UBERON:0002108,4.39e-13,4;UBERON:0008835,1.64e-11,22;UBERON:0003894,1.64e-11,22;UBERON:0009854,5.04e-11,23;UBERON:0007499,3.65e-10,25;UBERON:0009497,3.65e-10,25;UBERON:0000015,3.65e-10,25;UBERON:0002423,3.65e-10,25;UBERON:0006235,3.65e-10,25;UBERON:0004161,3.65e-10,25;UBERON:0009856,8.76e-10,26;UBERON:0006955,5.94e-09,2;UBERON:0004801,5.94e-09,2;UBERON:0002365,3.03e-08,31;UBERON:0002330,3.03e-08,31;UBERON:0002368,2.50e-07,35;UBERON:0005172,4.31e-07,54;UBERON:0005173,4.31e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3524688300616,16.3380173005392,18.1821904834599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.55798243562828,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.72177490378841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3081187375953,17.5545778351885,21.4343269456308,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,1.20645552710496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0.171086837884329,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,6.55678681511872,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@AAA1 | |||
}} |
Revision as of 16:28, 22 January 2014
Short description: | p1@AAA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AAA1_5end |
Coexpression cluster: | C1140_hepatocellular_B_small_gastrointestinal_argyrophil_liver_temporal |
Association with transcript: | 32bp_to_ENST00000358772, ENST00000439852, ENST00000537560, ENST00000544556, NR_033664, NR_033665, uc003teb.1, uc010kwo.1, uc010kwp.1_5end |
EntrezGene: | AAA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.75e-12 | 12 |
epithelial cell of cervix | 5.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 2.79e-13 | 19 |
digestive gland | 2.79e-13 | 19 |
liver bud | 2.79e-13 | 19 |
small intestine | 4.39e-13 | 4 |
hepatic diverticulum | 1.64e-11 | 22 |
liver primordium | 1.64e-11 | 22 |
digestive tract diverticulum | 5.04e-11 | 23 |
epithelial sac | 3.65e-10 | 25 |
epithelium of foregut-midgut junction | 3.65e-10 | 25 |
anatomical boundary | 3.65e-10 | 25 |
hepatobiliary system | 3.65e-10 | 25 |
foregut-midgut junction | 3.65e-10 | 25 |
septum transversum | 3.65e-10 | 25 |
sac | 8.76e-10 | 26 |
uterine epithelium | 5.94e-09 | 2 |
cervix epithelium | 5.94e-09 | 2 |
exocrine gland | 3.03e-08 | 31 |
exocrine system | 3.03e-08 | 31 |
endocrine gland | 2.50e-07 | 35 |
abdomen element | 4.31e-07 | 54 |
abdominal segment element | 4.31e-07 | 54 |