FFCP PHASE1:Hg19::chr7:39990840..39990869,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8621 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1733 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=223bp_to_AK025500_5end | |||
|description=CAGE_peak_16_at_CDK13_5end | |||
|id=chr7:39990840..39990869,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;4.66e-21;1!CL:0002625;4.66e-21;1!CL:0000216;4.66e-21;1!CL:0000708;6.56e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,3.45e-21,1;CL:0002625,3.45e-21,1;CL:0000216,3.45e-21,1;CL:0000708,8.29e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.53e-21;1!DOID:4549;1.53e-21;1!DOID:5861;1.53e-21;1!DOID:6496;1.53e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.53e-21,1;DOID:4549,1.53e-21,1;DOID:5861,1.53e-21,1;DOID:6496,1.53e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0002323!8.17e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;4.66e-21;1!UBERON:0001343;4.66e-21;1!UBERON:0004910;4.66e-21;1!UBERON:0004813;4.66e-21;1!UBERON:0004909;3.18e-11;2!UBERON:0002418;4.52e-08;3!UBERON:0004755;4.52e-08;3!UBERON:0003210;6.56e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,3.45e-21,1;UBERON:0001343,3.45e-21,1;UBERON:0004910,3.45e-21,1;UBERON:0005154,3.45e-21,1;UBERON:0005295,3.45e-21,1;UBERON:0004813,3.45e-21,1;UBERON:0005297,3.45e-21,1;UBERON:0005294,3.45e-21,1;UBERON:0010141,3.45e-21,1;UBERON:0005891,3.45e-21,1;UBERON:0004909,2.73e-11,2;UBERON:0004871,7.30e-11,8;UBERON:0002418,4.52e-08,3;UBERON:0004755,4.52e-08,3;UBERON:0003210,8.29e-08,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0.893922188854576,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0.730310090387373,0,0,0.408001382488506,0.313454721478088,0,0.273748850145768,0.125542639594803,0.0764134057479513,0,0,0.393364276848904,0,0,0,0,0,0.154934401160603,0,0.293600439334847,0.553995408531877,0.200544447470142,0.434021741431704,0,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0.852449501065388,0,0,0,0.251248665256743,0,0,0,0,0,0.211255286311942,0,0,0.22465726229299,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,0.411202997999018,0,0,0,1.94826728407911,0.222820913770347,0,0.221533894583621,0,0,0.130059347559878,0,0,0.289803085735052,0,0.267540828089713,0,0.226618685395132,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0.189069634328136,0,0.087834785693126,0,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0.309977343527296,0,0,0,0,0.336672227908132,0,0,0,0,0.300476117813194,0,0,0,0,0.300091096084402,0,0.257640540045629,0,0,0,0.504867548488229,0,0,0.355009592516614,0,0,0,0,0,0.731842236777572,0.132529768321485,0.464775771478074,1.0366105501537,0.756962552626885,1.82488679537915,0,0,0,0.464367928031979,0,0,0.168584690078102,0.241011029883482,0,0,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0,0.343135620597051,0,0,0.100528972411631,0,0.651616610620649,0,0,0.34779121492523,0.469634776943287,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,1.00917975910825,0.43596006883328,0.80672114403045,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0.508189248444927,0,0,0,0,0,0,0,0,0,0.542530047399471,0.207970861530807,0,0,0,0.601892199455438,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0.215714200818617,0,0.303127571446259,0,0,0,0.153461973288062,0,0.640695746278505,0,0.64341568457443,0,0,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0.229628896329213,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.183138929636687,0,0,0,1.6068392984416,0.193341436584244,0,0.307007349452259,0,0,0.145016693914229,0.0852266274161009,0,0.330569830721956,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0.38126038784765,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0.106824071127473,0,0,0,0.144269212976445,0.0711418433484141,0,0.199579371432817,0,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0.201799707191048,0,0.343505344755765,0.307240764308458,0,0,0,0,0,0,0,0,0,0.146508179271894,0.242721043499027,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0.311039587661807,0,0.179021174675609,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.472775363535873,0,0,0.347249989866585,0,0,0,0.552896299656123,0.295547618953547,0,0.32681539055697,0.557694977114413,0,0,0.46112780877612,0,0,0,0.183195186803725,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0,0,0.0884575645033392,0,0.296521128680622,0,0.104421949505455,0,0,0,0.547364367646998,0.391329237864179,0.242780379534093,0,0,0.30607276163049,0.252746318513952,0,0.103688191397247,0,0.330991955875499,0,0,0.284609546029793,0.277349346026277,0.173559738335131,0.0979923974143777,0,0.17472666824203,0.343972064943233,0,0.0730893170861856,0.164230914106418,0.387956065953678,6.17792886840502,0,0.137041924646751,0,0.126621591911757,0,0,0.213452994739353,0,0.72045208577053,0,0.171594997861965,0.14405479798815,0,0.235694034616795,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0.223171457441873,0,0,0,0,0,0,0.196854963029498,0.169346664131569,0,0,0.482259445395058,0.962776056180637,0.415440338029185,0,0,0.121499113316049,0,0.0788057072991982,0.104909176269996,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0,0.26446520348538,0.513260513652988,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0.314108192500469,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0.415045904808692,0,0.454947352624943,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0,0.449803112163605,0,0,0,0.521745061811734,0,0,0,0.181848659202559,0.214821114084977,0.928067519756987,0.398095888698616,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| |||
|short_description=p16@CDK13 | |||
}} |
Revision as of 16:41, 22 January 2014
Short description: | p16@CDK13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_CDK13_5end |
Coexpression cluster: | NA |
Association with transcript: | 223bp_to_AK025500_5end |
EntrezGene: | CDK13 |
HGNC: | 1733 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 3.45e-21 | 1 |
seminiferous tubule epithelial cell | 3.45e-21 | 1 |
Sertoli cell | 3.45e-21 | 1 |
leptomeningeal cell | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 3.45e-21 | 1 |
seminiferous tubule of testis | 3.45e-21 | 1 |
epithelium of male gonad | 3.45e-21 | 1 |
epithelial cord | 3.45e-21 | 1 |
sex cord | 3.45e-21 | 1 |
seminiferous tubule epithelium | 3.45e-21 | 1 |
testis sex cord | 3.45e-21 | 1 |
genital ridge | 3.45e-21 | 1 |
primitive sex cord of indifferent gonad | 3.45e-21 | 1 |
coelomic epithelium | 3.45e-21 | 1 |
epithelium of gonad | 2.73e-11 | 2 |
somatic layer of lateral plate mesoderm | 7.30e-11 | 8 |
cartilage tissue | 4.52e-08 | 3 |
skeletal tissue | 4.52e-08 | 3 |
blood-cerebrospinal fluid barrier | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.53e-21 | 1 |
extraosseous chondrosarcoma | 1.53e-21 | 1 |
myxoid chondrosarcoma | 1.53e-21 | 1 |
extraskeletal myxoid chondrosarcoma | 1.53e-21 | 1 |