FFCP PHASE1:Hg19::chr8:53853688..53853698,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-11bp_to_BC033145_5end | |||
|coexpression_cluster_id=C1408 | |||
|description=CAGE_peak_3_at_BC033145_5end | |||
|id=chr8:53853688..53853698,- | |||
|ontology_enrichment_celltype=CL:0000064!4.86e-23!3;CL:0005012!4.86e-23!3;CL:0000067!4.86e-23!3;CL:0002304!4.86e-23!3;CL:0000306!6.92e-17!4;CL:0002222!6.92e-17!4;CL:0002224!6.92e-17!4;CL:0002586!5.06e-11!3;CL:0000075!2.65e-09!27;CL:0000342!5.59e-09!1;CL:0002565!5.59e-09!1;CL:1001319!1.18e-08!1;CL:1000600!1.18e-08!1;CL:0000149!1.78e-08!4;CL:0002574!3.53e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000342;1.46e-50;1!CL:0002565;1.46e-50;1!CL:0002586;8.00e-18;3!CL:0000064;1.03e-17;3!CL:0000067;1.03e-17;3!CL:0005012;1.03e-17;3!CL:0002304;1.03e-17;3!CL:0000147;2.95e-15;14!CL:0000149;1.00e-13;4!CL:0000306;1.21e-13;4!CL:0002222;1.21e-13;4!CL:0002224;1.21e-13;4!CL:0000075;2.30e-08;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000342,1.46e-50,1;CL:0002565,1.46e-50,1;CL:0002586,8.00e-18,3;CL:0000064,9.46e-18,3;CL:0000067,9.46e-18,3;CL:0005012,9.46e-18,3;CL:0002304,9.46e-18,3;CL:0000147,2.95e-15,14;CL:0000149,1.00e-13,4;CL:0000306,1.29e-13,4;CL:0002222,1.29e-13,4;CL:0002224,1.29e-13,4;CL:0000075,2.30e-08,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3908!1.17e-13!5;DOID:3905!5.84e-13!9;DOID:4556!1.48e-10!3;DOID:1749!2.04e-08!14;DOID:1324!7.86e-08!15;DOID:0050615!2.39e-07!16 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!4.98e-53!11;UBERON:0000020!1.89e-30!23;UBERON:0000488!2.99e-30!4;UBERON:0000019!3.82e-30!19;UBERON:0000047!3.82e-30!19;UBERON:0004088!3.82e-30!19;UBERON:0003072!3.82e-30!19;UBERON:0003071!3.82e-30!19;UBERON:0004128!3.82e-30!19;UBERON:0001032!4.11e-29!24;UBERON:0004456!4.11e-29!24;UBERON:0000970!1.43e-28!20;UBERON:0002104!3.82e-27!21;UBERON:0001456!3.82e-27!21;UBERON:0001801!5.04e-25!14;UBERON:0001778!4.86e-23!3;UBERON:0001775!4.86e-23!3;UBERON:0002203!2.97e-20!6;UBERON:0001768!2.97e-20!6;UBERON:0005085!2.84e-19!29;UBERON:0010077!6.92e-17!4;UBERON:0005389!6.92e-17!4;UBERON:0000484!6.92e-17!4;UBERON:0002546!6.92e-17!4;UBERON:0000965!6.92e-17!4;UBERON:0001803!6.92e-17!4;UBERON:0003073!6.92e-17!4;UBERON:0005426!6.92e-17!4;UBERON:0000063!5.13e-14!97;UBERON:0001444!1.03e-13!48;UBERON:0002200!4.01e-11!11;UBERON:0006876!4.01e-11!11;UBERON:0001781!5.06e-11!3;UBERON:0001782!5.06e-11!3;UBERON:0005424!5.06e-11!3;UBERON:0003056!3.80e-10!61;UBERON:0002346!2.55e-09!90;UBERON:0000064!2.65e-09!219;UBERON:0002506!5.59e-09!1;UBERON:0001769!5.59e-09!1;UBERON:0000076!1.06e-08!8;UBERON:0004645!1.18e-08!1;UBERON:0001256!1.18e-08!1;UBERON:0001259!1.18e-08!1;UBERON:0003075!3.31e-08!86;UBERON:0007284!3.31e-08!86;UBERON:0001048!6.00e-08!168;UBERON:0000966!6.12e-07!5;UBERON:0005388!6.12e-07!5;UBERON:0001802!6.12e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;6.65e-72;11!UBERON:0002506;1.46e-50;1!UBERON:0001769;1.46e-50;1!UBERON:0000488;4.53e-50;4!UBERON:0000019;3.83e-42;19!UBERON:0000047;3.83e-42;19!UBERON:0004088;3.83e-42;19!UBERON:0010230;3.83e-42;19!UBERON:0000970;4.28e-40;20!UBERON:0002104;3.06e-38;21!UBERON:0001456;3.06e-38;21!UBERON:0000020;5.16e-35;23!UBERON:0002203;7.68e-34;6!UBERON:0001768;7.68e-34;6!UBERON:0002200;7.68e-34;6!UBERON:0001032;1.33e-33;24!UBERON:0004456;1.33e-33;24!UBERON:0001801;1.81e-32;14!UBERON:0010371;1.48e-22;31!UBERON:0006876;4.91e-19;11!UBERON:0001781;8.00e-18;3!UBERON:0001782;8.00e-18;3!UBERON:0001778;1.03e-17;3!UBERON:0001775;1.03e-17;3!UBERON:0010077;1.21e-13;4!UBERON:0005389;1.21e-13;4!UBERON:0000484;1.21e-13;4!UBERON:0000965;1.21e-13;4!UBERON:0001803;1.21e-13;4!UBERON:0000966;2.94e-11;5!UBERON:0005388;2.94e-11;5!UBERON:0001802;2.94e-11;5!UBERON:0001444;2.03e-10;48!UBERON:0007811;2.95e-09;52!UBERON:0000033;1.79e-08;50!UBERON:0000153;1.15e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,6.65e-72,11;UBERON:0002506,1.46e-50,1;UBERON:0001769,1.46e-50,1;UBERON:0000488,4.00e-50,4;UBERON:0000019,4.28e-40,20;UBERON:0000047,4.28e-40,20;UBERON:0010312,4.28e-40,20;UBERON:0004088,4.28e-40,20;UBERON:0010230,4.28e-40,20;UBERON:0003072,4.28e-40,20;UBERON:0004128,4.28e-40,20;UBERON:0003071,4.28e-40,20;UBERON:0000970,3.06e-38,21;UBERON:0002104,3.06e-38,21;UBERON:0001456,1.49e-36,22;UBERON:0002203,7.07e-34,6;UBERON:0001768,7.07e-34,6;UBERON:0002200,7.07e-34,6;UBERON:0000020,1.33e-33,24;UBERON:0001032,1.33e-33,24;UBERON:0004456,1.33e-33,24;UBERON:0001801,1.81e-32,14;UBERON:0005085,2.93e-26,31;UBERON:0006876,4.69e-19,11;UBERON:0001782,8.00e-18,3;UBERON:0005424,8.00e-18,3;UBERON:0001778,9.46e-18,3;UBERON:0001775,9.46e-18,3;UBERON:0001444,5.55e-17,49;UBERON:0000033,5.62e-15,56;UBERON:0001781,1.00e-13,4;UBERON:0010077,1.29e-13,4;UBERON:0005389,1.29e-13,4;UBERON:0000484,1.29e-13,4;UBERON:0002546,1.29e-13,4;UBERON:0000965,1.29e-13,4;UBERON:0001803,1.29e-13,4;UBERON:0003073,1.29e-13,4;UBERON:0005426,1.29e-13,4;UBERON:0000153,1.29e-13,62;UBERON:0007811,1.29e-13,62;UBERON:0003056,1.29e-13,61;UBERON:0003075,2.17e-10,82;UBERON:0007284,2.17e-10,82;UBERON:0002346,5.98e-10,86;UBERON:0000966,1.32e-09,6;UBERON:0005388,1.32e-09,6;UBERON:0001802,1.32e-09,6;UBERON:0010371,2.22e-08,104;UBERON:0000076,1.80e-07,8;UBERON:0010314,8.99e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945348171640679,1.99556457716308,0.702678285545008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.20584803253807,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56450125116389,0.984043937099117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0.211200673038813,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@BC033145 | |||
}} |
Revision as of 22:02, 22 January 2014
Short description: | p3@BC033145 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BC033145_5end |
Coexpression cluster: | C1408_Iris_Ciliary_Lens_Retinal_Astrocyte_Smooth_testicular |
Association with transcript: | -11bp_to_BC033145_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell (sensu Vertebrata) | 1.46e-50 | 1 |
iris pigment epithelial cell | 1.46e-50 | 1 |
retinal pigment epithelial cell | 8.00e-18 | 3 |
ciliated cell | 9.46e-18 | 3 |
ciliated epithelial cell | 9.46e-18 | 3 |
multi-ciliated epithelial cell | 9.46e-18 | 3 |
non-pigmented ciliary epithelial cell | 9.46e-18 | 3 |
pigment cell | 2.95e-15 | 14 |
visual pigment cell | 1.00e-13 | 4 |
crystallin accumulating cell | 1.29e-13 | 4 |
vertebrate lens cell | 1.29e-13 | 4 |
lens epithelial cell | 1.29e-13 | 4 |
columnar/cuboidal epithelial cell | 2.30e-08 | 27 |